KEGG   Silurus meridionalis (southern catfish): 124391360
Entry
124391360         CDS       T08004                                 
Symbol
ell
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124391360 (ell)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:smeo01009]
    124391360 (ell)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smeo03021]
    124391360 (ell)
Protein phosphatases and associated proteins [BR:smeo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     124391360 (ell)
Transcription machinery [BR:smeo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     124391360 (ell)
    Little elongation complex (LEC)
     124391360 (ell)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing CC149 Seryl_tRNA_N
Other DBs
NCBI-GeneID: 124391360
NCBI-ProteinID: XP_046713846
LinkDB
Position
9:22740629..22779488
AA seq 628 aa
MAALKEEQCYGLSCGRVSNGSNVSVFHVKLTDSALRALEDFQSSKGLSAQPLIRFTGNQG
KISIPQSTSPNNLRTFTFYLSNVGRDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVC
ATDDSYQKARQSMAQAEEETRSRGAIVIKPGGRYVGKRVQIRKPAMALSDVAPLRRAPRP
VLISSSMKKSTAPPRPLRERLVHLLALKPYRKPELLVRLTKDGLSPQDKDTLDSLLQQVA
NLNSKDNTFTLKDCLFKEVQKNWPGYTEVDQQILKRILVRKLCKAQSSGPVLGENPVSPH
KEQASSSPSQKRTTEDFIDPLANKKPRISHLINKGSAPVNGKLNTSNGKDSSGLSSAPLP
LLDLSQHLEPLSDVSNDSSHNGRDCEGQDAAVAERLSQTTALTGSSLQTESGLGSTPLAP
CIREGSKERSSSTTLHGKPKKSKKRKDKDKSRKRDPEKEKREERSVDRDGSQLKKLCQVT
TSPDLNMTSIPHKSTDLNGMYNSSSIPASSSVLADYLQKYTEIGSPEQRQTYKNDFNAEY
SEYRGLHARIEGITRQFTVLDAELKQLQQGTDQYKTIHNQILQEYRKIKKTNPNYSQERN
RCEYLHNKLAHIKKLIAEYDQQQLQHWH
NT seq 1887 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaggagcagtgttacgggctgtcttgtggcagagtgagcaacggc
agcaatgtctccgtgttccacgttaaactcaccgacagcgctttgagagcgctcgaggac
tttcagagcagcaagggtctgtctgctcaaccactaatacgcttcactggaaaccaaggg
aaaatctcaataccccagtcgacgagtccaaataatctcagaacgtttaccttctatctc
tccaatgtggggagggataacccccagggcagcttcgactgcatccagcagtacattaca
agtgaagggagcatacagctcgactgcctgggagggatccaggataagattacggtgtgt
gccacagacgactcgtaccagaaggccaggcagagcatggctcaggccgaggaggagaca
cgcagccgaggtgccatcgttatcaagcctggcgggagatacgtgggtaaacgggtccag
atccggaaaccggccatggccctttcggatgtcgcccctctgcggcgcgccccccgtcct
gtactcatctctagcagcatgaagaagagcacggcgccgccacggccactcagggagcgc
ctggtccacttactcgccctcaaaccctaccggaagcctgagctgctggttcgtctcaca
aaggacggcctctcaccccaggacaaggacactttggacagcctcctgcaacaggtggct
aatctgaatagcaaggacaacaccttcacattgaaggactgtttgtttaaggaggttcag
aagaattggcctggctacactgaggtagaccagcaaattctaaagaggatccttgtgcgg
aaactgtgcaaggctcagagcagtggtcctgtgcttggggagaatcccgtcagcccgcat
aaagaacaggccagtagctctccgtctcagaaaagaactactgaagattttatcgacccg
ttggcaaacaagaagcccaggatatcacacctgatcaacaagggatctgcacccgtcaac
ggaaagttaaacacttcgaacgggaaggactcgagcggcttatccagtgccccgcttccg
ctactggatctgtcgcaacatcttgagcctctgtcggacgtcagcaacgactcgagccac
aacggccgggactgtgaaggccaggatgcggcagtggctgagaggcttagccaaacaaca
gccttaacagggagctctctgcagactgagtcaggcttaggctccacacctttggcacct
tgcatcagagaaggatcaaaggagcgcagcagctcgaccacattgcatggcaagccgaag
aagtccaaaaaacgtaaagacaaagacaagtccagaaagagagatccggagaaggagaag
agagaggaaaggagtgtggacagggacggttcgcagctgaagaaattgtgccaggttact
acgagtccagacctgaacatgacaagtattccacataaaagcacagatctgaatggaatg
tacaacagctccagtattcctgcttcctcatcagtactggcagactatttacaaaaatac
actgagatcggctcgccggagcagcgtcagacctataaaaatgactttaatgctgagtat
agtgagtaccggggactccacgcacgaatagaggggatcaccaggcagttcactgtgctg
gatgctgagcttaaacagctccaacaaggcacagatcagtataagacaatccacaatcaa
atacttcaagagtatcgcaaaataaaaaagactaatcccaactacagccaagagaggaac
cgctgtgaatatctccacaacaagctggcacatataaagaaacttatagcagaatatgat
cagcagcaactccaacattggcactaa

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