Silurus meridionalis (southern catfish): 124391409
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Entry
124391409 CDS
T08004
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124391409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124391409
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Serotonin (5-HT3)
124391409
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
124391409
NCBI-ProteinID:
XP_046713924
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Position
9:7954782..7960125
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AA seq
443 aa
AA seq
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MCKPGQSGPSYESLQEVFERKPFRPSVNLSNPTIANISFTLYAVLGVNEKTQILTTFLWL
RLYWFHEFLIWDPEECDGITKISLPVSNLWSPDIIIYEFVDDDVSQACPYVYVNHTGHIR
YDRMLRLVTACNLEIFSFPFDVQNCTFTFGSYMHTIRDVRVKPALPFDQMSENSKRYLEA
SGEWELVVILGEAGVLNFGVDEWDIITFWVVIKRRPILYVVNLLIPSSFLMIIDILSFYL
PPHSVDRASFKMTLILGYTVFLLIMNDLLPSTANGTPIIGIYFSVCLAMMVISLLETVII
TNVLHHNSMKYRPVPQWVRLVVLKYIARFICYSDPDITHTQRKIMEQREIWSTQDTHTNT
TQHTHANAAVGVSPLCVPELVEISECVRAIRARLTLLQREEALQDEWCHVGYVLDFLLFR
IYLMLITCYAFVIIFMWCIWMYQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaagccaggtcagagtggaccatcctatgagtctctacaggaagtatttgagaga
aagcctttcagaccttctgtgaatctgagtaaccccaccattgccaacatctctttcacc
ctgtatgctgtacttggagtgaatgagaagactcagatcctcaccactttcctctggctg
cggttgtactggtttcatgaattcctgatctgggaccctgaggagtgtgatgggatcact
aagatctcacttccagttagcaacctctggtcacctgacatcatcatctatgagtttgtg
gacgatgatgtatctcaggcatgtccatatgtctatgttaaccacacgggtcacattcgt
tatgatcggatgctgagactcgtcacagcgtgtaacctcgagatcttcagtttccccttt
gatgttcaaaactgtacctttaccttcggctcctacatgcacacaattcgggatgtgagg
gtgaaacccgctctacccttcgaccagatgtcagagaactcgaagcgttacctggaggcc
agcggggagtgggagctggtggttattttgggagaagcaggagttctaaacttcggtgta
gacgagtgggacatcatcaccttctgggtggtgatcaagcgccggccaatcctctacgtg
gtaaacttgctcatcccgagctccttcctcatgatcattgacattctgtccttctatttg
ccacctcacagcgtcgaccgcgcctcctttaagatgacgctgattcttggttacaccgtt
ttcctgctcatcatgaacgacctgctgccgagcacggccaacggcacaccaatcatcggt
atttatttctctgtgtgtttggctatgatggtcatcagtctgctggagacggttatcatc
accaacgtccttcatcacaactccatgaagtaccgcccggttcctcagtgggtccgactt
gtggtgctgaaatacatcgctcgcttcatctgttacagcgatccagacatcacacacacc
cagaggaaaataatggaacaaagagagatctggagcacacaagacacacacaccaacact
acacaacacacacatgctaatgcagcagtgggtgtgtcccccctgtgtgtccctgagctg
gtggagatcagcgagtgtgtgcgagcaattcgtgctcgcctcaccctgttgcagcgagag
gaagctctgcaggatgagtggtgtcatgtcggctacgtacttgacttcctgctgtttcgc
atttacctcatgctcatcacctgctatgctttcgttatcatcttcatgtggtgcatctgg
atgtaccagtga
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