Silurus meridionalis (southern catfish): 124391412
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Entry
124391412 CDS
T08004
Symbol
pex6
Name
(RefSeq) peroxisome assembly factor 2
KO
K13339
peroxin-6
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124391412 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124391412 (pex6)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
124391412 (pex6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_22
DUF815
RuvB_N
RNA_helicase
AAA_5
Rad17
AAA_33
AAA_7
nSTAND3
Mg_chelatase
NPHP3_N
AAA_28
TsaE
Vps4_C
AAA_14
TIP49
IstB_IS21
AAA_25
AAA_17
AAA_24
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
124391412
NCBI-ProteinID:
XP_046713932
LinkDB
All DBs
Position
9:20484904..20502701
Genome browser
AA seq
1082 aa
AA seq
DB search
MAAPMKFVCLDPFSPDFHPLQAIVSKLQLTEMFSNCVETSCALLLSWQETQPLSKSTVLV
CAHVTAKELPECALHNSSSTLAVYVSRTFLSHYSVQEDSSGFARIIQLLPLEKIVIGART
KQSFKWASSEDFSSFLLVLASCPGQTLLVRRGDTLILPHHPLLGDNAMQVRQYLSDLIVL
DCTPLTQGMVTVNTTVVVSDCRDLLHGFCALDSADCCSIIHRPSSGSLFVSDFAHYANNL
GPGSSLLSNRLLFSSGFTEVLQALECRLDVQVTCDSAKLYKLSNLAMKIGKNIEVDMDSS
IFVSKNLLLKLGLFNCEWVMAALGKVKRCSGAEGLQSPPENKSATKTMAKPKGDVQLAKI
VAFIKSPEMDVGDSAGFISPVLWFNLSNGEATPIGSKCLKIKRWNKPGHKLSASICCSAA
PLYAKELHIEAVITADYDTHEPFNNVLFQHFNTPRLVRQGSILAIRSQGHPDFMEHGSDG
ITRWPVLYFKVKQVSGFSVEAEFGSYLADTDHTSLYMRGSTNSLAPCSMSEAASSFWTSL
LPPGLSGIVENMVSIIQPHITEKCVNLRRACSVLLMGPDGCGKVTAIKAVCRRLHLHLLK
VDCVTLCGDTAAACESKMKAAFHKAEFHHPCVLLLRDLQLLCQRRDSTETDSRVASALCQ
LVADAHSSIIVVGCVHSQRDLSLDIMPAFVHQVVIESPTEEQRFAMLASLSQDLPLGKDI
NLTKIAKQTAGFILGDICALLIAAGKAAYRRLLKTYYPHKAGAKEEQDLCVFGVTIIGDD
FSTALEDLQEAHSKAIGAPKIPSVKWQDVGGLQHIKKEILDTVQLPLEHPELLSLGLRRS
GLLLYGPPGTGKTLLAKAVATECSMTFLSVKGPELINMYVGQSEENIREVFCKARTAAPS
IIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSSDVFVIGATNRPDLLDQSL
LRPGRFDKLVYVGINEDKESQLQVLKAILRKFKVDPGVSLSEIVERLPLQVTGADLYALC
SDAMMSAIKRKILHITEGLETEVATLTLCAEDFSQALDILHPSVSEEELHKYKVIQQKLT
AK
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccatgaaattcgtttgccttgatccgttttcacccgattttcatcccttg
caggcgatcgtcagtaagttgcagttaacagagatgttttctaactgtgtcgaaacctca
tgcgcgctgttattatcctggcaggaaactcagccactgtcaaagtcgacagttttagtt
tgcgcccacgtaactgctaaggagcttcctgaatgcgctctccataacagcagcagcact
ctggcagtgtatgtgtcgagaactttcctaagtcattacagtgttcaggaagatagctca
ggatttgcgcgcatcatacagcttctgcctttggaaaagatagtcattggtgctcgcacg
aagcagagtttcaaatgggcatcttcagaagatttctccagttttctgctggttttggca
tcatgtcctggacaaactttgttggtaaggagaggtgacactctgattttaccacaccat
ccgctgcttggtgataacgccatgcaggtgcgtcaatacctctctgatttgatcgtgttg
gattgcacaccacttacccagggtatggtcactgtaaacactactgttgtagtctctgat
tgcagggaccttttgcatggcttttgtgctttagactctgctgattgctgcagcataatc
cacaggccgtctagtgggtccttgtttgtctctgattttgctcactatgcgaacaatctt
ggccccgggagctccttactgagcaaccgacttttgttcagctctggctttacagaagtt
cttcaagccctcgagtgcaggctggatgttcaggtcacatgtgacagtgctaagctttac
aagctgtcaaacctggcaatgaaaatcggaaagaacatagaggtggacatggacagctct
atttttgtgagcaaaaacctgttgttaaaacttgggttgtttaactgtgagtgggttatg
gcagcattaggaaaagtaaagagatgttcaggagcagaagggctgcaaagccctccagaa
aacaaaagtgcaacaaagactatggctaagcctaaaggagatgttcagctggctaaaatt
gtggctttcattaagtctccagaaatggatgttggtgatagtgcaggttttatctcacct
gttttgtggtttaacttgtccaatggagaagcaacacctattggaagtaaatgtctcaaa
atcaagagatggaacaagccaggacataaactgtcagcaagtatatgttgttctgctgca
cctctatatgccaaagaactacatattgaagcagttattactgcagattatgacacccat
gagccctttaacaatgttctgtttcagcactttaacacacctcgacttgtccgacaagga
agcatactggccattcgttcccaaggccatcctgattttatggaacacggctctgatgga
atcacaagatggccagtcttgtattttaaagtgaagcaggtgtctggcttttctgtggaa
gcagaatttggatcatatcttgcagatacagaccatacatctctgtatatgagaggttcc
actaatagtcttgcaccgtgctcaatgtctgaggcagcttcatcgttctggacgagtctc
ttgcctccaggactctccggcattgttgagaacatggtctccattatccagccacacatc
actgaaaagtgtgtaaatttgaggcgagcctgctctgttctcctcatgggtccagatgga
tgtgggaaggtcacagcaatcaaggctgtttgtcggaggcttcatctacacctgctgaag
gtggactgtgtgaccctatgtggagacactgcagctgcctgtgagtccaaaatgaaggct
gccttccacaaagctgagttccatcacccttgtgtgcttctgctgagggacctgcagtta
ctctgccagcgtcgagacagtactgaaacagactccagagtagcctctgcactttgtcag
cttgtagctgatgcccactcaagcataattgtggttggctgtgtgcatagccagagggat
ttgtccttggatattatgccagcatttgtgcaccaggtggtgatcgagagtcccacagag
gagcagaggtttgccatgctagccagcctcagccaagacctccctctagggaaagacatc
aatttgaccaagattgctaaacagacagcgggtttcattttgggagatatatgtgcttta
ctcatcgctgctggaaaagcagcttatcggcgcctgctaaaaacgtattatcctcataag
gccggtgctaaggaagagcaggacctgtgtgtgtttggtgtgaccattataggagatgat
ttctccaccgcactggaggatctgcaggaggcccactcaaaggcaattggcgctccaaag
attccatcagtgaagtggcaggatgtaggcggtttgcagcatatcaagaaggagattctg
gacaccgttcagctccctttggagcatccagagctgctctcactgggcctgaggcgctct
ggcctgctgctctatggtcctccaggcactggaaagacactgctggccaaagctgtggcc
actgagtgctcaatgactttcctcagtgtcaaaggtccagagctcattaacatgtatgtt
ggtcagagtgaggaaaacatcagagaggtgttttgcaaagctaggactgcagctccttct
attatcttctttgatgagttggactcattagctcctaatcgaggccgaagcggagactcg
ggaggagttatggacagggtcgtgtcgcagctcttagctgagcttgatggtctgcattcg
tctagtgatgtctttgtgattggagcaaccaaccggccagatttacttgaccagtcgctg
ctcaggcctggcagatttgataaattagtgtatgtcggcattaatgaagacaaagaatca
cagttgcaagtgttgaaggccatattaagaaagtttaaggtggatcctggtgtcagcctg
tcagaaatagtggagcgcttaccacttcaggtcactggagctgatctatatgcactctgc
tccgatgctatgatgtctgctattaagaggaagattttgcatatcactgaaggtctggag
acagaggttgctacgcttacgctgtgtgcagaggacttcagccaggctctggacattctg
catccttctgtgtctgaggaggagcttcacaaatacaaagtcattcagcagaaactcact
gcaaaataa
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