Silurus meridionalis (southern catfish): 124391469
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Entry
124391469 CDS
T08004
Symbol
onecut3a
Name
(RefSeq) one cut domain family member 2
KO
K24171
one cut domain family member 3
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124391469 (onecut3a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
124391469 (onecut3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124391469
NCBI-ProteinID:
XP_046714017
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All DBs
Position
9:complement(23005982..23012633)
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AA seq
439 aa
AA seq
DB search
MELRMENLSNLHTVSHSQPTDSFMNSAPTRQSVSHRNLESSSMVSSMASILDAAGDYRSD
HSLPAAMTMSCESGMSLNSTYTTLSPLQHLPSMSTVSDKFAHHHHAHPHHHHHHPHQHQH
QHHQHPAHQRLTAGNVSGSFTLMRDDRGFAPMGNLYAHYPKEISCMAQPLSQLSNGLGGL
HNPQQPLGVYGPCAHDKMISPGGFEAHAAMLSRGDFGGAGIMSTLNGLHASQLHSNGSML
SEHDRHEPGGTQAGGSGEAEEINTKEVAQRITAELKRYSIPQAIFAQRILSRSQGTLSDL
LRNPKPWGKLKSGRETFRRMWKWLQEPEFQRMSALRLAACKRKEQEQLKEQNAVPKKQRL
VFTDLQRRTLIAIFKENKRPSREMQLTIAQQLGLELNTVSNFFMNARRRCTSRWHDEHQQ
GRGSSPGQSGTSTANFSKA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggaacttagaatggagaacctcagcaaccttcacaccgtttcacactctcagccaacg
gacagttttatgaactctgctcctacgagacagtcggtgtcgcaccggaacctggaatcg
tccagcatggtgtctagcatggcctcgatcctggacgcggctggcgattatcgcagcgac
cactctcttcccgccgctatgacgatgtcctgcgagtctgggatgagccttaacagcacc
tacactactctgtcaccgttacagcacctgccctcgatgtccacggtatcggacaaattc
gcgcaccaccatcatgcacacccgcatcatcatcaccatcaccctcatcagcaccagcat
cagcatcatcagcatcccgcgcaccagcgcctgaccgccgggaatgttagcggcagcttc
acgttaatgcgcgacgaccgcggctttgctccgatgggcaacttgtacgcacattacccc
aaagagatctcttgcatggcacagccgctttcacagctgtccaacggcttgggtggtctc
cacaaccctcagcagcctctcggagtctacggaccttgcgctcacgacaagatgatctct
ccaggaggcttcgaggctcatgcagcgatgctaagtcggggggattttgggggggccgga
atcatgtccactctaaacggtcttcatgcctcgcagttgcactctaatggatctatgctg
tcggaacacgacaggcacgaacccggaggtacccaggcaggcggatctggggaagcagag
gagatcaacacgaaagaggtggcacagagaataacggccgaactgaaaaggtacagcatt
ccacaagctatcttcgcccagcggatattgtctcggtcccaaggcactctctcggacctt
ctgcggaatcctaaaccgtgggggaaactaaaatcaggacgggagacgtttcggaggatg
tggaagtggctccaagagcccgagttccagcgcatgtcggcgcttagactcgcagcttgt
aagcgaaaagagcaagagcagctgaaggagcaaaatgcagtccctaaaaagcagcgcctg
gtgttcactgacctgcagcggcgcacacttattgccatctttaaggagaataagcggccc
agcagagaaatgcagctgaccattgcacaacagctgggcctagagctcaacacagtgagc
aactttttcatgaacgcccggcgtcgctgcacaagccgttggcatgacgagcaccagcaa
ggccgtggaagcagccctgggcagtctggcacctccactgccaatttctccaaagcctga
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