Silurus meridionalis (southern catfish): 124391475
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Entry
124391475 CDS
T08004
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124391475 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124391475 (rubcn)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Other autophagy associated proteins
Others
124391475 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
124391475
NCBI-ProteinID:
XP_046714023
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Position
9:complement(7962208..7979599)
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AA seq
884 aa
AA seq
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MEMCLEADSVEKRREHWKLLLNLKTTVEGLLSTNNPNVWSRYGGLQRLHKDMTNILSHGL
KHEQVYYKQKDYWRFVWCLRSISPNLAPHVEPFSQMEPVLSSSVQGESDKAERWLLHSLQ
SHTLSMQLKPLITQRSTTRKYYTDEAFLLSDMHVAAMFQCLEAVEKNDARLLALINTTRL
SHLKECVPVDLLTTQQHVLPGASTCTHTPSGSFRDGAHTVYSERNSDASGCDCGSGVPWA
CLSTNESNLDPATTQNAQTDSNHTANPAPSEVGDCDGNDGPEYLAIGNLGRRSRRGSSSS
TQNNEHVQVRCDAPEAPAPSQRRSSFSDMERGKRRSFRGHARSLSDTGVMQKHKQETVVD
EQSVSFGPFSPHSSDSSHSSLYMEAGGLQYGSGWQSDGLFRKPSEGQSLISYLSEQDFGS
CADLEKENAHFSISESLIAAIELMKCKMRAEEADEDGDSDSEIQQLKQKIYLRRQQIRRS
RMQTSSSTNPTLPSTESGGSVRSSRDSVLNSDSGSSDDVEDPVLRDSDIKRSTTLSSRSF
ISSESVSQWLLQSNSAESVAMGLLRQFEGLQLPAASELEWLVPEHDAPQKLLPMPDSVPI
SPDDGEHADVYKLRIRVRGNLEWAPPRPQIIFNVHHAHKRKVLVMKQNYRCAGCGTRVDP
DYIKRMRYCEYLGRYFCQCCHDNAVAVVPGRVLTKWDFGKYYVSNFARDLLGKIAQDPLF
NLNDINSGLYKKVKSLEAVRVLRLQLYHLKNLFKTCRLAKEPLQHFDSVSAHLTEDLHLF
SLNDLSAVRSGGLAPKLRDLVRVGSEHVTSCMLCQAKGFVCEFCGNDKDIIFPFELNKCR
RCDECNACYHRSCYKNKSVCPRCLRLAERRERMNSTNTEEEEWQ
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtgcttagaggcggacagtgtggagaaaaggcgtgaacactggaagctcctg
ttgaacttgaagacgaccgttgaaggtcttttatccacaaataaccccaatgtttggtct
cgttatggaggactgcagcgactgcacaaagacatgaccaacatcctgagtcatggcctc
aaacatgaacaggtgtactataagcagaaggattactggcgctttgtgtggtgtctgcgg
tccatcagtcccaatcttgctcctcatgtagaaccgttcagtcagatggagccggtgttg
agcagcagtgttcagggagagagtgataaggccgagcgttggctcctccacagcctgcaa
agtcacacactttctatgcaactaaaacccctgatcacacaacgcagcactacccgcaag
tactatacagacgaagcgtttcttctgagtgatatgcacgtggcagccatgtttcaatgt
ttggaggcagtggagaaaaatgatgcacgactgctcgccctcatcaacactacccgcctt
tcccatttgaaggagtgcgttcctgtggacctgctcaccacccagcagcatgtgttgcct
ggagcttccacatgcacacacactccatctggctcgttcagagacggtgcacacactgtg
tattctgagaggaattcagatgcatctgggtgtgattgtggctcaggggttccgtgggct
tgtttaagcaccaacgaaagcaacctggacccagcgacgacccagaatgcacagactgac
tccaaccatactgctaaccccgccccttctgaggttggggactgtgatggtaatgacggc
cccgagtatctagccatagggaacctgggtaggcgaagccgcagaggttccagcagctca
acccaaaacaacgagcatgttcaggtcaggtgtgatgctccagaagctccagccccttcc
caaagacgcagctctttctcagatatggaaaggggaaaaagacgaagcttcaggggtcat
gcaaggtcactgtctgatacaggggtcatgcagaagcacaaacaagagacggttgtagac
gagcagagtgtgagttttgggcctttctcccctcacagcagtgacagcagtcatagttct
ctttacatggaggccggaggtcttcagtatggtagcgggtggcaatctgatggattgttc
cggaaaccatcagagggtcagagtctgatcagctacctgtcagagcaggactttggcagc
tgtgcagatctagagaaggagaacgcacatttcagcatctctgaatcgctgattgctgcc
atcgagctgatgaaatgtaagatgagggcagaggaggcagacgaggatggagacagcgac
agtgagatccagcagctcaaacagaagatctatctgcgcagacagcagatccgccgcagc
cgtatgcaaacgtccagctccaccaaccccactcttccatccacagaaagtggtggatct
gtgcggagttccagggattctgtgcttaactctgactctggatcatctgatgatgtggag
gatcctgtgcttagagattcagatattaaacggagtacaaccctgagcagcaggtccttt
atcagctctgagtctgtgtctcagtggctgttgcagtcgaatagtgctgaatcagttgca
atggggctgctgcgtcagtttgagggtctgcagcttcctgctgcctctgaacttgagtgg
cttgtccctgaacacgatgctcctcagaagctactgccgatgcctgactctgtgccaatc
tctccggatgacggtgaacacgctgacgtgtacaaactgcgaatccgtgtgagggggaat
ctggagtgggcaccacccaggcctcagatcatctttaacgtccatcatgcacacaagagg
aaagtgttggtgatgaagcagaattacaggtgtgcagggtgtggaactcgtgttgaccca
gattacatcaaaaggatgcgttactgcgagtacctaggccggtatttttgtcagtgttgc
catgataacgcagttgctgtggtgcctgggcgggtcctgactaaatgggatttcgggaaa
tattatgtcagtaactttgcccgagacctgctgggaaaaattgcccaggatcctttgttc
aacctcaacgacatcaacagcggcttgtacaagaaggtgaagagcttggaggctgttagg
gtgttgaggctgcagctgtaccacttgaagaacctctttaaaacctgccgcctggccaaa
gaacccctacagcactttgactcagtttctgcacacctgactgaagacctccacctgttc
tcactgaatgatctgtcagctgtgcgctctggtggcctcgcacccaaactgcgggacttg
gttcgggtgggatccgagcatgtcacttcctgtatgttgtgtcaggctaagggattcgtg
tgtgaattctgtggaaatgataaggacatcatcttcccctttgagctgaacaagtgtcgc
cgttgtgatgagtgcaacgcatgttatcaccgctcgtgctataagaacaagagtgtgtgt
ccacggtgtctccgcctggccgagagacgagagaggatgaacagcacaaacacagaggag
gaggagtggcaataa
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