Silurus meridionalis (southern catfish): 124391551
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Entry
124391551 CDS
T08004
Symbol
mccc1
Name
(RefSeq) LOW QUALITY PROTEIN: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00280
Valine, leucine and isoleucine degradation
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
124391551 (mccc1)
Enzymes [BR:
smeo01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
124391551 (mccc1)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
RimK
ATP-grasp_3
ATPgrasp_ST
BT_MCC_alpha
HlyD_D23
GARS_A
NQRA_N
RnfC_N
ATP-grasp_4
Motif
Other DBs
NCBI-GeneID:
124391551
NCBI-ProteinID:
XP_046714164
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All DBs
Position
9:6386011..6401691
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AA seq
717 aa
AA seq
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MAAAVLQVGVRQALRAQLQKLIWSTGAVRHASVGRIEKVLIANRGEIACRVMRTAKKMGV
RSVAVYSDADMHSMHVAMADEAYHIGAAPSQQSYLCMEKVLEVAKKSSAQAVHPDXGFLS
ENTEFAELCKKENIIFIGPPSSAIRDMGIKSTSKHIMSAAGVPIIEGYHGEDQSDEKLQS
EAARIGYPVMIKAVRGGGGKGMRIAHTEAEFHEQLESARREARKSFNDDVMLVEKFVKNP
RHVEVQVFGDQHGNAVYLFERDCSVQRRHQKIIEEAPGPGISPEVRRKLGEAAVRAAKAV
NYVGAGTVEFIMDAQHNFYFMEMNTRLQVEHPVSEMITGTDLVEWQLRVAAGEKIPLSQD
EIALRGHSFEARIYAEDPNNDFLPGAGPLLHLSTPEAEPHTRIETGVRQGDEVSAHYDPM
IAKLVVWGEDRSAALKKLRYCLRQYNIVGLNTNIDFLLNLSGHPEFEAGNVHTSFIQQHY
DQLFPKATAPAGDVVCQAALGLLLQEREHTLELLRQSNDMFSPFGSGNGGRLNVLYSRNL
ALQLGENKVTVPVTYNPDGTYSMEIGGQLFQASGELQKVGGATYLNCCVNGVLSRPKLVM
VDNTVYLFSMEGSAEVKVPLPKFLAGVSTAGAQDGAVAPMTGTIEKVLVKAGDAVQKGDP
LMVMIAMKMEHTIRAPKAGVIKKVLFKEGSQANRQAVLVEIEEEQEEANTPRERGIP
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggctgtcctgcaagtgggagttaggcaggctctgagagcacagctgcagaag
ctcatatggagtacaggagcagtcagacatgcatctgtggggaggatcgagaaagtcctc
attgctaaccgaggagagattgcatgcagagtgatgcgcacagcaaaaaagatgggtgtt
cgttctgtggctgtgtacagtgatgctgacatgcactccatgcatgtggccatggcggat
gaagcgtaccatatcggagcagcaccatcacaacagagttatttatgtatggagaaagtt
ctagaagttgccaagaaatcctcagcacaggctgtccatccggatnatggcttcctgtct
gagaacacagagtttgctgaactgtgcaaaaaggaaaacatcatcttcatcgggcctcca
tcgtcagcgattcgtgatatgggcatcaagagcacctccaaacacataatgtcagctgca
ggcgttcccatcattgagggttaccacggagaggaccaatcagatgagaaactgcaatct
gaagctgccaggattggttaccctgttatgattaaagccgtacgaggtggaggtgggaag
ggaatgcgtatcgctcacacggaggccgaatttcacgagcagctggaatctgccaggaga
gaagctcgcaagtctttcaacgacgacgtcatgctggtggagaagtttgtgaaaaacccc
aggcatgtggaggtgcaggtgtttggggatcaacatggtaatgctgtttatctgtttgag
agagactgcagtgtgcagcggagacaccagaagatcatagaagaagcaccagggcctggt
attagtcctgaagtgaggcgtaaactgggagaagccgcagtccgggcagctaaagcagta
aactatgtgggagcaggcactgtggagtttattatggacgctcagcacaatttctacttc
atggagatgaacacacgtttgcaggtggagcatcccgtgtctgagatgatcaccggtaca
gacctggtggagtggcagctcagggtggctgctggagaaaagattccgctctctcaggat
gagattgcgttgagaggtcactcgtttgaggcccgaatctatgctgaagaccccaataac
gacttcttgcctggagccgggcccctgctgcacctttccaccccggaggcggaacctcac
acgcgcatcgagactggagtacggcaaggtgacgaggtttcggctcattatgaccccatg
atcgctaagctggtggtttggggagaggatcgctccgctgctctgaagaaactgcgctac
tgcttacgccagtacaatattgtgggtctcaacaccaacatcgatttcctgttaaatctt
tcgggtcatccagagtttgaggcaggaaacgtacacaccagcttcatccagcagcactac
gatcagctgtttcccaaagcgactgcaccagcaggagacgtggtgtgtcaggctgctctt
gggcttctgctgcaggagagagaacacaccctggagttgctacgccagtcgaacgacatg
ttctcgcctttcggctcgggtaacggtggccggctcaacgtgctctacagcagaaacctt
gcgctacagctgggggaaaacaaagttacagtacctgtgacctataatccagatgggacc
tatagcatggagattggaggccagttattccaggcgtcaggtgagctgcagaaagtaggc
ggggccacgtacctgaactgctgcgtaaatggagttttgtctcgacccaaactggtcatg
gtggacaacacggtttatctcttctccatggagggcagtgcagaggtgaaagtgccttta
ccaaagttcttggctggtgtgagtactgctggagcacaagatggcgctgtggcacccatg
accggaacaattgaaaaggtcctggtgaaggctggagatgctgtgcagaagggagatcct
ctgatggtgatgatcgcaatgaagatggagcacaccatacgagcgccgaaagcaggcgtc
atcaagaaggtgctgtttaaagaaggttcgcaggccaatcggcaggccgtgctggtggaa
atagaggaggaacaggaggaagcgaacactcctagagagcgagggattccgtga
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