Silurus meridionalis (southern catfish): 124391579
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Entry
124391579 CDS
T08004
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124391579 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124391579 (slc6a5)
Transporters [BR:
smeo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124391579 (slc6a5)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124391579
NCBI-ProteinID:
XP_046714205
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Position
9:complement(21963758..21991410)
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AA seq
742 aa
AA seq
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MDFSEQRDMQKQLHEGAVGVAPGVPADAVQLPPDVTERKTFCPAEKKSGETDKVYGTFRS
GAQVLPPVPAPHKDASGPFLPQTDKAMSQNNCPSSAKQGALVVLGTDGTASVQLNREEQN
DDDEEGDENKARGNWSNKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLIMLGL
AGIPIFLLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLF
ASFTSLKGLLPWTYCTNEWNTAGCKDKDMLQLDSCILRDRNITSIKNTTFCMSANAAGSL
SKLLNITMENRSYASPSEEYFKYNVLHISKGIEYPGDIRWPLAACLLLAWLIVYASLAKG
IKSSGKVVYFTATFPYVVLVILLIRGVTLPGAGSGILYFITPKWEKLNDAKVWKDAATQI
FFSLSAAWGGLITLSSYNKFHNNCYRDTIIVTCTNSATSIFAGFVIFSVIGFMAHELKVP
IERVADEGPGIAFVVYPEALTRLPISPFWAIIFFLMLLTLGLDTMFATIETIVTSVADEF
PKYLRKHKPIFTLVCCVAFYILGFPMINESGMYMLQLVDTYAASYSLVIIAIFELIGVSY
IYGLQRFCEDIEMMIGFQPNRFWRICWAFVTPTILTFILGLSLYQWKVMTYEDYTYPTWS
MVLGWLMVICSVIWIPIMFVIKMHLAPGTMIERLKLVCSPQPDWGPFLMKHRGERYKNMI
DPLGTNSLGLKLPPKDFQLSGP
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggatttctcagagcagagagacatgcagaagcagctgcacgagggtgcggtcggagtt
gcccctggtgtcccagcggacgcggttcagttgccccctgatgtcaccgagcgcaaaacg
ttctgccccgcggaaaagaaatccggagaaacggataaagtgtacgggacgtttcggagc
ggggcccaggttcttcctccggttcctgcccctcataaggatgcctccgggccattttta
ccccaaacggataaagccatgtcgcagaataactgcccctcctccgcgaaacagggggca
ttggtggttctgggcacagatggcactgcgtctgttcagctcaaccgggaagagcaaaat
gatgatgatgaagaaggtgatgagaacaaagcaagaggaaactggtcaaataaattggat
tttattctctctatggtgggctatgctgtgggattgggaaacgtgtggaggtttccatat
cttgcctttcaaaatggaggaggtgcatttttgatcccgtatctgatcatgttgggtctt
gctggaattcccatattccttttggaagtttcattggggcaatttgccagtcaaggacct
gtttctgtttggaaggctattccagctttacaaggttgcgggattgccatgttgattata
tcagtgttgatagccatatactataatataataatgtgctggactctgtactacctgttc
gcttcgttcacttcgttgaagggcttattgccatggacttactgcaccaacgaatggaac
acagctgggtgcaaagacaaagacatgctgcagctagattcctgtattcttcgagacaga
aacatcacttctattaagaacactacgttttgtatgtctgcaaatgctgctggaagttta
agcaagctgttaaatatcacaatggaaaacagatcctatgctagccccagtgaagaatat
ttcaaatataatgtgttgcacatttccaaagggattgagtatccaggagatatccgctgg
cccctggctgcttgccttttacttgcatggctcattgtgtatgcttccctggctaaggga
atcaagtcatcaggcaaggtggtgtattttacagccacatttccatatgtggttttggtg
attttgctgatccgtggtgtgacgctgcctggtgcagggtcaggcatcctttacttcata
acaccgaaatgggaaaaactcaatgatgccaaagtttggaaggatgctgccactcagatt
ttcttctccctctctgcagcatggggagggttaatcactctttcttcctacaataaattt
cataacaattgttatagggacactataatagtgacatgtaccaacagcgctaccagtatt
tttgctggtttcgtgattttctctgtcattgggttcatggctcatgaactaaaggtgccg
attgagagagtggcagatgaaggtcctggtattgcatttgtagtttatccagaagccctc
accagacttccaatctctccattttgggccatcattttctttctcatgctccttacactt
ggactggataccatgtttgcaaccatcgagactatcgtgacatctgtagctgatgaattt
ccgaaatacctgcggaaacacaagcctatattcacccttgtgtgctgtgtggccttttat
attctcggcttcccaatgataaatgagagtggcatgtacatgcttcagctggttgatacc
tatgcagcctcctattctctcgtcattatagccatctttgagctaattggagtttcgtac
atttacggtttacaacgattctgtgaggacatagaaatgatgattggtttccagccgaac
aggttctggaggatttgttgggcttttgtaacacctactattctgacatttattttggga
ctgagtttgtaccagtggaaagtgatgacctatgaagactatacctaccccacttggtct
atggtgcttggctggctcatggtcatctgttctgttatctggatccccatcatgtttgtt
atcaagatgcatcttgctccaggaaccatgattgagcgattaaagcttgtatgctctcct
caacctgactggggtcctttcttgatgaagcatcgtggtgagcgctataaaaacatgatt
gacccacttggaacaaattcattggggctcaaacttcctcctaaagacttccagctctct
ggcccttga
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