Silurus meridionalis (southern catfish): 124391640
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Entry
124391640 CDS
T08004
Symbol
mex3b
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124391640 (mex3b)
04121 Ubiquitin system [BR:
smeo04121
]
124391640 (mex3b)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124391640 (mex3b)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124391640 (mex3b)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124391640 (mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
KH_2
Prok-RING_4
KH_DEAH11_2nd
zf-RING_5
zf-P11
Motif
Other DBs
NCBI-GeneID:
124391640
NCBI-ProteinID:
XP_046714286
LinkDB
All DBs
Position
9:8476567..8481422
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AA seq
533 aa
AA seq
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MPSSLFPELERNGSGGGGSQGVDALDDQRALQLALDLTLLDLDENXACDNEPRKKSVNMT
ECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREI
ISAAEHFSMIRASRNKNSSMNGSGSVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKR
IQQQTHTYIVTPSRDKEPVFEVTGMPENVDRARDEIEAHIAMRTGAGLIEFANATDDNDF
HANGTDVGFEMHAASGSSHHATPWGKTNSSASATPSLGRKPFASYRNDSSSSLGSASTDS
YFGTNYSPPSPALSYNNNNNNNNLNINGNSFVYGGEIISPDCAELAFDSSPGFDPAPGLI
WSQYERSMSITNGATSSSIFPSNASCNANGILANQRRLNGMNCSTQPRLSPPLHHVSGIS
DHPLARRVRSDPGGGSLNFPGYNNMASHLPGLPSDSSVSSSSSSSSSSSSSSGTSRKGSR
DCSVCFESEVIAALVPCGHNLFCMECANRICERSDPECPVCHAAVTQAIRIFS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgccgagctccctgttccccgagctggagaggaatggcagcggcggcggcggcagtcag
ggggtcgacgccctggacgaccaaagagcgctgcagctcgcgctggacctcaccctcctc
gacctggacgaaaacnccgcgtgcgacaacgagccccggaagaagagcgtgaacatgacc
gagtgcgtgcccgtgcccagctccgagcatgtggccgagatcgtgggaagacaaggttgt
aagattaaagccctgcgtgccaagaccaacacctacattaagactcctgtgcgaggggag
gagcccgtgtttgtagtgacgggcaggagggaagacgtagccatggctcgaagggaaatc
atctcggcggctgagcatttctctatgatccgagcatcgcggaacaaaaacagcagcatg
aatgggagtggcagcgtgcccgggccgcccaatctgccgggtcaaaccaccatacaggtg
cgagtgccataccgcgtcgttgggttggtggtgggacccaaaggagccacaatcaagcgc
atccaacagcagacgcacacctatatcgtgaccccgagcagagacaaggagcccgtgttc
gaggtaacaggcatgccagagaatgtggaccgggcgcgtgacgagatcgaggcgcacatc
gctatgcgcacaggtgctgggctgatcgagttcgccaatgccactgacgacaatgacttc
catgccaatggcacagatgtgggctttgaaatgcatgcagcgagtggcagcagtcatcac
gccaccccatggggcaaaacaaattctagtgctagtgccacacccagccttggacgcaag
cccttcgccagctatcgcaacgacagctccagttctctgggtagcgcctccacagactcg
tatttcggcaccaactatagcccgccgagtcctgcactgagctacaacaacaataataac
aacaacaacctgaacatcaatggcaactcgtttgtttacggcggtgagatcatatcccct
gactgcgccgaactcgcttttgattcctcgcccggatttgacccggcgcccggtttgatt
tggtctcagtacgaacgtagcatgagcataacaaacggtgctacatcgtcatccatattc
ccttccaatgcttcctgtaacgcgaacgggatcctggccaatcagaggcggctgaatggg
atgaactgctccacgcagcctcgtctgtccccacctcttcatcatgtgagtggcatcagc
gatcatccactggcccggagggtacgcagcgatccgggcggaggctctttaaatttcccg
ggctacaacaacatggcttcccatctccctgggttgccctcagattcatctgtgtcctcc
tcttcgtcatcatcttcctcttcctcctcttcctcggggacgagccgcaaaggcagccgg
gactgttcagtgtgcttcgagagcgaggtcattgccgccctcgttccatgcggccataac
ctcttctgcatggagtgtgccaaccgcatctgcgagcgcagcgaccctgaatgccccgtc
tgccacgctgcagttactcaggcaatacgtatattttcataa
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