Silurus meridionalis (southern catfish): 124391705
Help
Entry
124391705 CDS
T08004
Symbol
ptgfr
Name
(RefSeq) prostaglandin F2-alpha receptor
KO
K04262
prostaglandin F receptor
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04020
Calcium signaling pathway
smeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124391705 (ptgfr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124391705 (ptgfr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
smeo04030
]
124391705 (ptgfr)
G protein-coupled receptors [BR:
smeo04030
]
Rhodopsin family
Lipid
Prostaglandin
124391705 (ptgfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
124391705
NCBI-ProteinID:
XP_046714409
LinkDB
All DBs
Position
9:25970191..25971506
Genome browser
AA seq
375 aa
AA seq
DB search
MSHNVTTTTGCLESSTISNDSCTAENVSVTSSVVTMTVGIVSNTLALFILLKAYQRFRLK
SKASFLLFASGLVVTDFLGHLINGSLALYVYALNKQWENFDPQQVLCGFFGVCMSFFGLS
PLLLGGIMAVERCIGVTRPLFHTTALTSYHTNRLLALVWILALLVALLPVLVWRPYQVQG
SRSWCFYRLVGVRDWLDVLLPMIFSVLGLLSLLISFVCNTVTGFTLLWSRMHRQHDYHHS
RRSSLHSEMICQLLAIMMVSCVCWGPFLVMIILTSLQEKGEDAYLLMSVRLATWNQILDP
WVYILLRKAVLKRLCRLAQRFHSPYPEQEPERRWRFSALGSSVQASSSVSSKPDFICLDG
PFLPDARITTSTNYT
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacaacgtgacgacgacaacaggatgcttggaatcgagcacgatatctaacgac
agctgtaccgcagaaaacgtctctgtcacgtcctctgtcgtaaccatgacggtggggatc
gtctccaatactctggctctcttcatccttctcaaagcctaccagcgattccgactcaaa
tccaaagcttcgttcttgctatttgcgagtggactggtggtgaccgactttctgggacac
cttataaacggctctctggctctttacgtgtatgccctaaacaaacagtgggagaacttc
gacccccagcaggttctttgcgggtttttcggcgtttgtatgtcctttttcggtttgagt
cccctgctgcttggaggcattatggcggtggagcgatgcattggcgtgacacgtccgctc
tttcacaccacagcgttgacctcgtatcatacaaaccgtctcctggcgcttgtctggatc
ctggcccttctcgtggctctgctgccggtgttagtgtggcgcccgtaccaggttcaagga
tcccgaagctggtgcttctaccggctggttggggtacgcgactggctggacgtcctcctc
cccatgatcttctccgtgttgggattgctatctctactcatctcatttgtgtgtaacacg
gtgactggattcacactcctgtggagcagaatgcaccgtcagcatgactaccaccactct
cgaagaagttctctccattctgagatgatttgtcagctccttgccatcatgatggtatcg
tgtgtttgttggggtcctttcctggttatgattattctcacaagcttgcaggagaaaggt
gaagatgcctacctgttgatgtctgtgcgcctggccacgtggaaccagatccttgacccg
tgggtgtacatacttctgcgcaaggctgttttgaagcgtctttgccggcttgcacagaga
ttccacagtccatatccagaacaggaaccagaacgcaggtggaggttcagcgctctgggg
agttctgtgcaggccagcagctctgtaagcagcaaaccagacttcatttgcttggatggt
ccgttcctgccagacgcccgaatcacaaccagcacgaattacacatga
DBGET
integrated database retrieval system