Silurus meridionalis (southern catfish): 124391727
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Entry
124391727 CDS
T08004
Symbol
mbd3b
Name
(RefSeq) LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 3b
KO
K11591
methyl-CpG-binding domain protein 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124391727 (mbd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124391727 (mbd3b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
124391727 (mbd3b)
Chromatin remodeling factors
NuRD complex
124391727 (mbd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD_C
MBDa
MBD
DUF5035
Pardaxin
Motif
Other DBs
NCBI-GeneID:
124391727
NCBI-ProteinID:
XP_046714443
LinkDB
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Position
9:complement(1645426..1658308)
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AA seq
307 aa
AA seq
DB search
MMSFISLIAGGGERRGAQRRREERRKEEKKGFNQGSSRRHPNIMQMEKNDRGEEEEEEHR
REAGRLFSLCPAGKKFRSKPQLVRYLGNSMDLNSFDFRTGKMLMSKLNKNRQRLRYETNS
QTKGKPDLNTSLPVRQTASIFKQPVTKVTNHPSNKVKTDPQKAVDQPRQLFWEKKLSGLN
AYDIAEELVKTMDLPKGLQGVGPGCTDKTLLSAIASALHXSSAPITGQLSAAVEKNPGVW
LNTAQPLCKAFIVTDEDIRKQEELVYNVRKRLEEALMADMLAHVEEASSGEEALKDEGNC
HDDKEEV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctttcattagtctcattgcggggggaggggagaggagaggagcgcagaggaga
agagaagagaggagaaaagaagagaagaagggatttaaccagggatcaagcaggagacac
ccaaatatcatgcaaatggagaaaaacgacagaggtgaggaagaggaggaagagcacagg
agagaggcgggtcggttgtttagtttgtgtcccgctgggaagaagttccgcagcaaacct
cagctggtgcgttaccttggcaactccatggacctcaactcgttcgatttccgcaccggg
aagatgctcatgagtaaactgaacaagaaccgacagaggcttcgctacgagacgaacagt
cagaccaagggaaaacccgacctgaacacgtctctcccggtgcgacagacagcctcaatc
ttcaaacaacctgtcaccaaagtcaccaaccatcccagcaacaaagtcaaaacagatcca
caaaaagccgtagaccagccaagacagttgttttgggagaagaagctgagcggacttaat
gcatatgacatcgcagaggagttggtgaaaaccatggacctacccaaaggtctgcaggga
gtaggtcccgggtgcacggacaagactttgctgtctgcgattgcaagcgccctgcacnnc
agctccgctcccatcacaggccagctgtcggcagctgtggagaagaacccaggagtgtgg
ctgaacacggcccagccgctctgcaaggctttcattgttacagacgaggacatcaggaaa
caggaggagctggtgtacaacgtgaggaagcgtctggaggaggctctcatggccgacatg
ttggctcacgtagaggaggcttccagcggtgaagaagcacttaaggatgagggaaactgc
catgatgataaggaggaggtatag
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integrated database retrieval system
