Silurus meridionalis (southern catfish): 124391732
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Entry
124391732 CDS
T08004
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124391732
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124391732
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124391732
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124391732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
TOR1L1_N
Cnd1
Sec7-like_HUS
MMS19_C
HEAT_DAAF5
TAN
ParcG
Paxt-1_C
RYDR_ITPR
Motif
Other DBs
NCBI-GeneID:
124391732
NCBI-ProteinID:
XP_046714451
LinkDB
All DBs
Position
9:11756273..11824695
Genome browser
AA seq
1610 aa
AA seq
DB search
MEVNMEYIVGQVMQKDLGRRLQVGQEIIDYILDRQKSHDLEQDQTMLDRMVDSVATSWVN
SSNFKVALLGMDIVSALVTRLQNRFKSQILTVLPSLTDRLGDAKDQVRDQAQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTREAVCFCLISTLNIYGAQGLTLSKIVPHICHLLGDPT
SQVRDGAMNCLVEIYRHVGEKVRMDLGKKGLPQSRLNVIFSKFDEVNRSGNMVLSADKNI
DDDDSVDGGRSSASSKGASSVRRTGSMRRPSSASSTKSTGKEVSSAGAVDEEDFIRAFED
VPTLQIYSSRELEESMNKIREVLSDEKQDWEHRVTALKKVRSVLLARATDHEAFLQQLRQ
LEGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAESIMPTLLNLVPNSAKVIATS
GVAAIRLIIRHTHYPRLIPILTSNCTSKSVAVRRRCYEFLDLLLQEWQTSCLDRHVAVLM
ETIKKGVHDADSEARSVARKCYWGFHSHFSKEAEQLFQALELTYQKALQSHLKASDSVTS
LPQSDRSSSSSQESLNRPQSAKASVQSSITRNKVVSSRVSSTPGSLQRSRSDVDVNAAAT
AKSRMPKVPAAAPFSSAGALPPGSYASLDATPGNWEGRVRTRRQSSGSSVGGGSSVKDSR
GRSRAKVVSQSQRSRSANQAGGKTHAGSRSSSPGKLIGQSYGKVSSVTPSEKRSRIPRSQ
GCSRESSPGRSGQVRGSRIPRPSMSQGCSRDTSRESSRDTSPARGFTPLVSRRHSRSTSA
LTSGDALQTDRFGLIHQARISASVNAMRILNTGMEVEAAVADALLLGDSRNQRRPVRRWY
ESPGMYSDDDANSDASSACSELSYSSRNGGVPHYMRQTEDVAEILNHCASSNWSERKEGL
VGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIVLHREDLQDWL
FVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFSYDQQFNILMRFIVDQTQTPNLKVKV
AILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKTLHSWVSEELAGRLS
SLTSLPVEGNLEERCKQAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNS
SNTAATSSPSNTVSRTHPRLSGSRTSPLTSPTNCSHGGLSPSRIWGWSSNGLSKAPCPFT
PPPSGPGTPPLRPGRQAPSPSMLEYDTENMNSEEIYSSLRGVTEAIQSFSFRSQEDSYEP
IKRDTKKDDASAVASSAADTRLCTDVVEGGRMALDNKTSLLNTPSPRSFLGPRTREYNPY
NYTDSTSTYDKAALKEAVFDDDAEQLRDGRRQEFGENKILAPKSYSAGPAQHLELVGDLL
KELSNHSDRVDERRAALLELLKVTRDDSVAVWEEHFKTMLLLLLETLGDKDHTIRALALR
VLKEILRSQPARFRNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLC
PIVQTSDYPIDLAAIKMQTKVIERIPEESLYQLLPDIIPGLLQGYDNTESSVRKASVFCL
VAIYSVIGEGLKPHLAQLTGSKMKLLNLYIKRAQNTNSNSSSSSDISSHS
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaatatggaatatattgtgggacaggtgatgcaaaaagacctgggacggcga
ctccaggttggacaggagatcatagactacattctggacaggcagaagtcacatgatcta
gagcaagaccagaccatgctcgacaggatggtggacagtgtggctacttcatgggtcaac
tctagcaacttcaaggtcgcacttctgggaatggacattgtgtctgctttagtgaccaga
ttacaaaatcgctttaaatcccaaattttaacagttctgcccagtttaacagatcgttta
ggtgatgctaaagaccaagtaagagaccaagcccaggctcttctactaaaaatcatggat
caagctgcaaatccacagtatgtgtgggatcgaatgttgggaggattcaaacacaagaac
aacaggaccagagaggctgtctgtttttgccttatttctacactaaacatatatggagcc
cagggtttaactctgagcaagattgtgcctcacatatgccacctattaggagaccctaca
agtcaggttcgagatggagctatgaactgccttgtggagatttacagacatgtaggagag
aaagtgcgaatggatctggggaaaaaagggttgccacaatctcggttgaatgtcattttt
agcaaatttgacgaagtaaatcgatcagggaatatggtgctgtctgcagataagaacata
gatgatgacgactctgtggatggaggccgttcctctgcctcatctaaaggcgcatcgtct
gttcgccgaactggatccatgcgcaggccaagctccgcctccagcaccaagagcacagga
aaagaggtttcaagtgctggtgctgtggatgaagaagacttcatccgagcctttgaggat
gtgcccaccctacagatttactccagcagagagcttgaggagtccatgaataaaatcaga
gaggtcctctcagatgaaaagcaagactgggagcacagagtgactgcgctgaagaaggtg
cgttcagtgcttctcgccagagccactgatcatgaagcattcctacaacaactgcggcag
ctggaaggagcgtttaagctctctgcgaaagacttgcgctctcaagttgtccgtgaggcc
tgcatcacactggggcatctgtcgtctgtgctgggtaacaagtttgaccatggagctgag
tccatcatgcccactttgctcaatttggtacccaatagtgctaaagtaatagccacatct
ggtgtagcagcaatacgacttattatacgacacacacactatcctcgacttatccccatc
cttaccagtaactgcacgtccaaatctgtggctgtccggcggcgctgttacgagttttta
gaccttttactccaggaatggcagacaagctgtctggacagacatgtagctgtactgatg
gagactattaagaaaggagtccatgatgcagactcagaagcgagatctgttgccagaaag
tgttattggggatttcacagccacttcagtaaggaggcagagcaactgtttcaggccctt
gagctgacctatcagaaggcactgcagtctcatctaaaggcctcggacagtgttacgtct
ctcccccaatctgatcgttcctcctccagctctcaagagagcctcaatcgtccacagtct
gctaaagcatctgtacaaagcagcataaccagaaataaagtggtcagctctagagtgtcc
tctacacctggctcattgcagcgctcacgcagcgatgtcgatgtcaatgctgccgctacc
gccaagtctcgaatgcccaaagtacccgctgctgctcccttcagctcagccggtgcactg
ccgcctggctcctatgcctcactagatgcaactcctggtaattgggagggtcgtgtacgc
acacggaggcagagttctggcagcagcgttggaggtggatcctctgttaaagacagtcgg
gggcggagccgagcgaaagtggtgtcgcagtcacagcgatccagatcagcaaaccaagca
ggtggtaagactcacgctgggagtcgttccagttctcctgggaagcttattggtcagtcc
tatggcaaagtgtcctctgtgaccccatccgagaagcgcagtaggatcccacgcagtcag
ggctgcagccgagagagcagccctggtcgctcgggccaggtgcggggtagtcgcatccca
cgtcccagtatgagtcagggttgcagtcgtgacacaagcagggaaagcagcagagacaca
agtcctgcacggggttttactccccttgtgtctcggcgtcactcacgctccaccagtgcc
ctgacaagcggtgacgccctgcaaacagatcgttttgggctgatccatcaggcacgaatc
tcagcctcagtcaacgccatgcgcattctgaacacaggcatggaagtggaggcagcagtg
gctgatgctctgctattaggagactccagaaatcagcggaggccagtgcggcgctggtac
gagtctcctggtatgtactcggacgatgatgccaacagcgacgcctctagtgcctgttca
gagctttcctatagctctcgtaacggaggagtgccgcactacatgcgtcagacggaggac
gtcgctgagatcctaaaccactgtgccagttccaattggtctgagaggaaagaaggcctg
gtgggtctccagaaccttctgaagagccaaagaaccctcagccgtgtggaactcaagagg
ctgtgtgagattttcactaggatgtttgctgaccctcacagcaagagagtgttcagcatg
ttcctggaaacgttggtggacttcatcgtgctgcatagggaggatttgcaggactggctg
tttgtgctcctgacacagctgttaaagaagatgggtgctgatctgctgggctcagtgcag
gctaaagtgcagaaagccctcgatgtcaccagggattctttttcctacgatcagcagttc
aacatcttaatgcgctttattgttgatcagacacaaactccaaatcttaaggtgaaggtg
gccattctgaagtatatcgagtctctggccaggcaaatggatcccaccgattttgtaaac
tccagtgagacgcgactagccgtctcccgcatcatcacctggacaacggagccgaaaagc
tcggatgtcagaaaaaccctgcacagctgggtaagtgaggagctggcaggcaggctaagc
tcactcacttccctccccgtggagggcaatctggaggaaagatgtaagcaggctgcacag
gtggtgctgatctccctattcgaactaaacacaccagagttcactatgctgctgggagcg
ctgcctaaaaccttccaggacggcgccaccaaactcctgcataatcacctaaagaactcc
agcaatactgcagccacgagttcaccgagcaacacagtgagccgcacacatccaagactc
tctggttcccgcaccagccccttgacgtctcctacgaactgctctcatggaggactctca
cccagtcgtatatggggctggagttcgaacggtctatctaaggccccgtgtcccttcacc
ccccctccctctggccctggcaccccccctctccgccctgggcgccaggccccctcgccc
agcatgctggaatacgacacagagaacatgaactcagaggagatctacagctctctgaga
ggagtcactgaagccattcagagctttagcttccgcagccaggaggacagctatgagcca
atcaaacgtgacaccaagaaagatgatgctagtgcagtagcatcctcagctgcagacacc
cggctatgtacagacgtggtggagggaggccgaatggctctcgataacaagacctcttta
ctgaacacaccatctcctcgctcattcctggggccaaggacacgcgagtacaacccctac
aactacaccgactccaccagcacttatgataaagctgctttgaaggaggcagtgtttgac
gatgatgcggaacagctccgtgatggtcgtcgtcaagagtttggtgaaaacaaaatcttg
gctcccaaaagttactctgcaggcccggcacagcatttggagctagttggtgacctcctg
aaagagctgtctaatcacagtgatcgtgtggacgagaggcgagctgccctgttagagctt
ttgaaggtgacccgtgacgacagtgtagccgtatgggaggaacattttaaaaccatgctg
cttctgctccttgagacactgggggacaaagatcataccatccgggcactggctctgcgt
gttctaaaagagatcctgcgaagtcaaccagcacgcttcaggaactatgcagaactgacc
attatgaaaacgctggaggcacacaaagactctcacaaagaggtggtacgtgctgcagag
gaggctgcctctaccttggcttcctccatccacccagagcagtgcataaaggtgctgtgt
ccaatcgtacagacttcagactaccccatcgacctggccgcaattaaaatgcagaccaag
gtcattgagcgcattccagaggagtctctttatcagctgctgcctgacatcatccctggc
ctactacagggttatgataacactgagagcagcgtgcggaaagccagtgtcttctgcctt
gttgcaatttattctgtgattggagaagggttgaagcctcatcttgcccaactgacaggc
agcaagatgaaactgctgaacctctacatcaaacgagcccaaaataccaacagcaacagc
agcagctcctctgacatctcctcccacagctaa
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