Silurus meridionalis (southern catfish): 124392078
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Entry
124392078 CDS
T08004
Symbol
fhod3a
Name
(RefSeq) LOW QUALITY PROTEIN: FH1/FH2 domain-containing protein 3
KO
K23939
FH1/FH2 domain-containing protein 3
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124392078 (fhod3a)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
124392078 (fhod3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
Drf_GBD
Motif
Other DBs
NCBI-GeneID:
124392078
NCBI-ProteinID:
XP_046714714
LinkDB
All DBs
Position
10:complement(28087900..28149119)
Genome browser
AA seq
1643 aa
AA seq
DB search
MATVFQCRVQFLDDTDPFNSTNFPEPXAPSRYTFRQDTPLSDQLSAVHALLHPPHKLDDC
ALQLSHNGTYLDLESSLSEQIDELEGFEQDDCGEGKKHSIILRTQLSVRVHACIEKLYNC
DGRDLRRALFSLKQIFQDDKDLVHAFVMAGGLTCLIKVGANADQNYQNYILRALGQIMLY
VDGMNGVIGHPEAIQWLYILIGSKFRLVVKTALKLLLVFVEYSESNATLLIQAVNAVDAK
RGRRQWSNAMEILNEKDGVDTELLVYTMSLINKTLAALPDQDSFYDLVDVLEEQGIEHMT
SRYSTHRSTDPELREQIRIYEETLQHEDDDDEGQAPPTGNCGTPRSTAGRVKGRGLERRR
SLRHSLGHISTLSPASSHRTNYNRGEEKATSSAVKPLPVIEEESDESEKTPQTESSSDDD
DGDEEGEGRPCSLSVIRDQAAGADLAAATPSADVEEEKCVKESEENVKPPSLLASLLAQR
KSSVVVPPCSEMTPPLHDSTRPQNLLPYVPHSPFHLFSYDIQEDVDLKQNHAERHTRSYS
TLSAASPPSKHQNERPGLLLSSSYRQHQESLAAQRERRRIEREERLQKIEREERNKHSRD
YAVNMEEARIAREERFKTAERIAAEEYEQERVRSAPHSFSDIYQSHQDHTPTASHLPDAE
SVFLSISEPEQKEQEEEEEEEISAEQVMEEAAEKEEEPGEEVEKPGEEVEEPGEEVEETG
EEVEEDEVEKPGEEVKELVNFSQEAEVEDSGILSDKERQNEEVNEKDNCSASSISSSSST
LERRQSFSTTPHNLKHLYIPHTLIKSTAILDFKSLEKILMASSARSWLAMRRDQSPIHAA
RSSMCDRSVSAMFTISWIVMIFEEIRVLDSVGVVALEMSRRLPCRRGSSSSQCLNSDQCH
DILNSKVFMMDMLYSQNMKPGEEEEEEEAELEKEGGHENESEESRVVGGANTSGENSGEK
KSESGSVRAFAERFGDVVKGLSSPPIEMQEEQKPLHLPPVITPQKESDNMWDQIMATPRE
LRIRDIDFTDLADEDDQGILDSGGLIGSGTLAPPPPPPCPFNINPPPAPPAPGPGTAPPP
PPPQSECLLFQKKKKTIRLFWSEVRPDEWRFLGIRRGPLSLWSKLEPVKLDISKLEHLFE
SKSKEISVTKKTAVEGKRQEIIVLDSKRSNAINIGLTVLPPPRTIKSAILNFDEYALNKE
GIEKLLMMVPTEEEKQRIQEAHMLNPDVPLGSAESFLLTLSSISELCARLQLWAFKMDYD
TIEKEVAEPLQDLKEGMEQLEKNKTFRYILSALLGIGNFLNGSQAKGFDLSYLEKVPEVK
DTVHKQSLLHHACSAVVENFTDSTDLYSEIGAITRSAKVDFDLLQDNLAQMERRCKASWE
NLKLIAKHEMKPALKQKLTDFLKDCAGRIIILKTVHRRIINRFHMFLLFLGHPVSGVREI
SVHRFCKIVSEFALEYRTTRERILQQKQKRADHRERNRTRGKLIIDINAKTDDEEENVRN
QGPGSSCSGSVSTVRKNEVQGLNHEEDAADHEYMTTVLKRSQRGSSTEISGVPGLRTRTR
ARPSRSHTVLAAAAANECSMPDDPADEIMERIVRSATQSSQERTELRERRRSRANRKSVR
RTLKSEMTLEEAQAQEAQVWKPL
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggccacggtgttccagtgcagggtccagttcttggacgacaccgacccgtttaacagc
accaacttcccggagccgnncgcgccctcccggtacaccttccgccaggacaccccgctg
tcagaccagctgtccgccgtgcacgcgctcctgcacccgccgcacaagttagatgattgt
gctcttcagctgtcccataatggcacatatttggatttggaatcatctctcagtgaacag
attgatgaactggaagggttcgagcaggacgactgtggagaaggaaagaaacacagtata
attctgagaactcagctgagtgtccgggttcatgcctgcattgagaagctgtataactgt
gatggcagagatctaagacgggctttattctctctcaaacagatatttcaggatgataag
gacctggtccatgcctttgtgatggcggggggactaacctgtctgattaaagttggagca
aacgcagaccagaactaccagaactacatcctgcgagctttaggtcaaatcatgctgtat
gtggatggtatgaacggggtcataggacatccggaggccatccaatggctctacattctg
attggctcgaagtttcgtctcgtagtgaaaacggcactgaagctcctgctggtgtttgtg
gaatattccgagtctaatgccactctgctcattcaagccgtcaatgctgtggatgcaaag
agaggacggagacagtggtccaacgctatggagatattaaacgagaaggacggagtggac
acggagttgctggtgtacacaatgtccctcatcaacaagactctggcggctctgcctgat
caggattcgttctatgacctggtggatgttctggaggagcaaggcatcgaacacatgacc
tcacgctacagcacacacaggagcactgaccctgaactccgagagcagatcagaatttat
gaggaaacacttcagcatgaggatgatgatgacgaaggccaggccccacccacaggaaac
tgtggaactccgaggtccactgcaggcagagtgaaggggcggggcttagagagacgtcgc
agtctcagacactcactgggtcacatctcgactttaagccccgcctcctcacataggacc
aactacaacaggggagaggaaaaagcaacatcaagtgcagtgaagcctctacctgtcata
gaggaggagagtgatgaaagcgaaaagactccacagacagagtcgagctctgatgatgat
gatggtgatgaagagggagaaggtagaccctgtagtctaagtgtgatcagagaccaggct
gctggtgctgatcttgctgctgctactcccagtgctgatgtagaggaagagaagtgtgtg
aaggagtctgaggaaaatgtcaagcctccgtctttactagcgtctttactcgcccaacgc
aagtcctctgtagtggttccaccctgctctgagatgactccacccctccacgactccacc
cgtccacagaacctcctaccatatgtcccacactctccatttcacctcttttcctacgac
attcaggaggatgtggatctgaagcagaatcatgctgaaaggcatacaagatcatattcc
actctcagtgctgcatcccctcccagcaaacaccagaacgaaaggcctggtcttcttctg
tcctcctcctatcgacagcatcaggagtctctggcagcacagcgagagaggaggagaatt
gaacgtgaggagagactgcagaaaatcgagagagaggagagaaataaacacagccgggac
tatgctgtgaacatggaggaggctcgaatagctcgagaggaaagatttaaaactgcagaa
aggatcgcagcggaggaatacgagcaagaacgagtgcgatcagcacctcacagcttctca
gacatctatcaatcacatcaggatcacacacccactgcatcccacctgccagatgctgaa
tcagtgtttctatccatctcagaacctgaacaaaaggaacaagaagaagaggaggaggaa
gagatcagtgctgagcaggtcatggaagaggcagcagaaaaagaagaggaacctggagag
gaagtggagaaacctggagaggaagtggaggaacctggagaggaagtggaggaaactgga
gaggaagtggaggaagatgaagtggagaaacctggagaggaagtgaaagaactggttaac
ttttctcaggaagcagaagtggaagacagtggaattttgagtgataaggaacgacagaat
gaagaagtgaatgagaaagataactgttcagcatcaagtatctcatcatccagcagcacc
ctggagaggagacagagcttctccacaacaccacacaacctcaaacatctttatatcccc
catactcttataaaatcaacagcaatcctggattttaaaagtctggagaagattctgatg
gcatcctctgctagaagctggttggcaatgcgcagggaccagagtcccatacatgctgcc
aggtcctccatgtgtgacaggtctgtctctgcaatgttcaccatctcatggattgtgatg
atctttgaggagatcagggttctggacagtgtgggggtggtcgcactggagatgtccagg
cgactcccgtgcagaaggggctcctccagcagccagtgtctgaacagtgatcaatgtcat
gacatcctcaacagcaaagtgttcatgatggacatgctctactcacagaacatgaaaccc
ggtgaggaagaagaggaagaggaggcagagctggaaaaagaaggtggacatgaaaatgaa
agtgaggagtcccgagtggtgggcggggctaatacgagtggagagaacagcggcgagaag
aagtctgagagtggatcagttcgagcatttgctgaacgctttggagatgttgtgaaaggc
ctgagctctccaccaatcgaaatgcaggaagagcagaagcccctccatctgcccccagtt
ataaccccccaaaaagaatcagacaatatgtgggatcagatcatggccacacctcgtgag
ctgcgcatcagagacatcgacttcacggatttggctgatgaggatgatcagggcatcctg
gattcaggaggtttaattgggtcaggaactctggctccacctccacctcctccatgcccc
ttcaacattaaccctcctccagcccctccagcccctggacctggcacagccccacctcca
cctcctcctcagtctgaatgcttgctctttcagaagaagaagaagacgatccgtttattc
tggagtgaggtgagaccggatgagtggaggtttctgggaataagacgaggacccctgtct
ctctggtccaaactggaaccagtaaaactggacataagcaaactggagcacctgtttgag
agcaagtccaaggaaattagtgtaaccaagaaaactgcagtggaaggtaagaggcaggag
atcattgtcctggattccaaacgcagtaacgccattaacatcggcctcaccgtgcttcct
ccaccacgaaccatcaaatctgccatccttaattttgatgaatatgcactgaataaagag
ggcattgagaagctcctgatgatggttccaactgaagaggagaagcagaggattcaggaa
gctcacatgttgaatcctgatgttcctttgggcagtgctgagtccttcctattaacactc
tcatccatcagtgaactttgtgctcgcctccagctgtgggccttcaaaatggactatgac
accattgagaaggaagtggcagagccgttacaagacttaaaggagggcatggagcagctg
gagaagaataagacattccgctacatcctctctgccttgcttggtattggcaactttctc
aacggatctcaagctaaaggttttgatctgagttatctggagaaggttccagaggtgaag
gacacagtccataaacagtctttgctgcaccatgcctgctctgcagtagtggagaacttt
actgacagcaccgacctttactcagagatcggcgctattacacgctctgctaaggtcgac
tttgacttgctgcaggacaatttggcacagatggaacgccgctgcaaagcatcttgggaa
aatctgaagctgatcgccaagcacgagatgaaaccagcactcaagcagaagttgacagac
ttcctgaaggactgtgcagggaggattatcatactgaagactgtacatcgacgcatcatc
aaccggttccacatgttcctgctgtttcttggacacccagtgtctggagttcgtgagatc
agtgttcatcgtttctgcaaaatcgttagtgaatttgcactggagtaccgaaccacaaga
gagagaatactccagcaaaaacagaaacgagccgatcatcgcgagaggaacaggacacgg
gggaagttgatcatagacatcaatgctaagactgatgatgaagaagagaatgtgagaaat
cagggacctggaagcagctgtagcggtagtgtctctactgtaaggaaaaatgaagttcag
ggactgaaccatgaggaagatgcagcagatcatgaatacatgacaacagtgctaaagaga
agccagcgaggtagcagcactgagataagtggagtcccgggactacgtacaagaacaagg
gcaagacccagcagaagtcatactgtgttagcagcagcagcagcaaatgaatgtagcatg
cctgatgatccagctgatgagatcatggagcggattgtacgctcggctacacagagttca
caagaacgcactgagctacgtgaacgaagacgctcacgcgcaaaccgtaaatcagtgagg
aggacattaaagagtgagatgaccctggaggaggcacaagctcaggaagctcaggtgtgg
aagcccctttga
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integrated database retrieval system
