Silurus meridionalis (southern catfish): 124392083
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Entry
124392083 CDS
T08004
Name
(RefSeq) TBC1 domain family member 9B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124392083
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124392083
Endosome - Golgi transport
Rab GTPases and associated proteins
124392083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_7
Ric8
Motif
Other DBs
NCBI-GeneID:
124392083
NCBI-ProteinID:
XP_046714719
LinkDB
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Position
10:15941264..15962983
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AA seq
1221 aa
AA seq
DB search
MWISPEEVLLANALWVSERANPFFILQRRKGHGKGGGITGLLVGTLDVVLDSSARVAPYR
ILHQSGDSQVFWSIACGSSRKEITEHWEWLEANLLQTLSIFDNDEDITTFVKGKIQGIIA
EENKSRQAQEDEDCGKFREAALKMRKLFGMPEEEKLVNYYSCSYWKGRVPRQGWLYLSVN
HLCFYSFLLGKEVTLIVQWTDVTQLDKNATLLFPESVRVSTRDTEHFFSMFLNINDTFKL
MEQLANIAMRQLLDNEGFAADQSLPRPGKTLKNVSALKRDLDARAKNERYRALFRLTKDE
RLDGHTDCTLWTPFAKMHVVGQMFVSNNYICFASREEDLCQLIIPLREVSIVEKADSSSV
LPSPLSISTKNKMTFLFANLKDRDFLVQRISDFLQRTPDRLGQSESPSPSTSPSLPAMLP
LLGSSEVTQDRHYSSSLPTAKQGLLNIYQKGRPEDLGPKATKEKMKQESWNIHFFEFGRG
VCMYRTSKTRDLVLKGIPESLRGELWLLFSGAQNEMVTHPAYYAELVEQAMGKCTLATEE
IERDLHRSMPEHHAFQNEMGIAALRRVLTAYAYRNPGIGYCQAMNIVTSVLLLYCTEEEA
FWLLVALCERMLPDYYNTRVVGALVDQGVFEELTRECLPLLYEHMQDLGVISTISLSWFL
TLFLSVMPFDSAVLLVDCFFYEGIKVIFQVSLAVLHANMEKLLNCTDEGEAMTILGRYLD
NVVNKQTVSPPIPHLHALLTSGDAPPPEIDIFDLIKMSYEKFGSLRADVIEQMRFKQRLK
VIQSLEDTAKRSVVRAIMTDSAFSIEELEELYVLFKAKHIMSCYWGASSTAAERHDPSLP
YLEQYRIDCGQLIQLFSALAPWSCGMHTSTLAARLFRLLDNNKDSLINFKEFVTGLSGMY
HGDMTEKLKLLYKLHLPPALCPEEAESALEATHFFTNDDTPQDHPSFSHVDFLVQEVTSA
EEVKEVADTGGDSEEKKEEKVKDYKYYLRMWAKEREPKKETIKDLPRMNQEQFIELCKTL
YNMFSEDPLEQELYHAIATVASLLLRIGEVGKKFSSNGSKKCDTQAQPVVESPGKEDSFG
EANSGQSLVSKALAEAQLESSPPPANGSDEDVKDDTSISSYSVVSAGSLQCEDIADDTVL
IGCGVDGAGGGSDSRRGSAPDGDWSISFEQVLASLLTEPALVNYFEKKHDIRSKMAACKA
QRAVERQISSSSDHELAQLST
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcagtcccgaggaggtgctgctcgctaacgcgctgtgggtgagtgagagggcc
aatcccttcttcatcctgcagcggaggaagggacacggcaaaggaggaggcatcaccggt
cttctggttgggactctggacgttgtgttagattccagtgctcgtgtggctccgtatcga
atccttcatcaatcaggagactcgcaggtcttttggagcattgcctgtggttcatctcgc
aaggagattacagaacattgggaatggctggaggctaatttattgcagactctctccatt
tttgacaacgatgaagacattactacttttgtcaagggtaagatacagggaatcattgct
gaggaaaataagagccgtcaggcacaagaagatgaggattgtgggaagtttcgggaggcg
gcactgaagatgcgaaagttgtttgggatgccggaggaggaaaaactggtgaactattac
tcatgcagctactggaagggtagagtgccacgtcagggctggctctacctgtctgtcaat
cacctgtgcttctactcctttctgcttggaaaagaggtgacgttaatagtgcagtggaca
gacgtgactcagttggataagaatgccactctattattccctgagagcgtgcgtgtgagc
actcgggacacggagcacttcttctccatgtttctcaacatcaatgacacattcaaactg
atggagcagctcgctaacatcgccatgaggcaactgctggacaatgagggcttcgctgca
gaccagtcgctccccagacctggcaaaaccctcaaaaatgtttctgcactcaaaagggat
ctggacgcacgggcgaaaaatgagagataccgagctctgttccgcctgacgaaggatgaa
cggctggacggtcacacagactgcactctgtggacaccctttgctaagatgcatgtggtc
ggccagatgtttgtctccaacaactatatctgtttcgccagcagagaggaagacctgtgt
caacttatcataccacttagagaagtctctatagtagagaaagctgacagcagcagtgtt
ttgcctagtcctctttccatcagcactaaaaacaagatgaccttcctgtttgccaacctc
aaagatcgcgacttccttgttcagcgcatctcagacttcctgcagcgaacgcctgacagg
cttggccaatctgagagtccaagtcccagcacctctccttccctccctgcaatgctgcct
ttgctggggtcgagcgaggtcactcaggatcggcactacagctccagccttcccacagcc
aagcagggtcttctcaacatctaccagaaaggccgtcctgaagacctgggacccaaagcg
acaaaggaaaaaatgaagcaggaatcctggaatatccatttctttgagtttggacgaggt
gtgtgcatgtaccgcacgtctaagacccgagaccttgtcctgaaagggattcctgagagt
ctgagaggagagctgtggctactcttttcaggtgctcagaatgagatggtgactcaccca
gcttactatgcagagctggtggagcaggccatgggcaagtgtactttggctacagaggag
attgagagagacttgcatcgatcaatgcctgagcatcatgccttccagaatgagatgggc
attgctgcacttcgacgggtactcactgcatatgcatatcgcaacccgggcatcggctac
tgccaggccatgaatatagtaacatcagtgttgctactgtactgtactgaagaggaggca
ttctggttgctggtggctttgtgtgaacggatgctacctgattattacaacaccagggtt
gtaggagcactggtggatcagggtgtgtttgaggagctgacacgggagtgtttgccactg
ctctatgagcacatgcaggacctgggcgtgatctccaccatctctctgtcctggttcctc
accctcttcttatccgtcatgccgttcgatagtgctgtgttgctggtcgattgtttcttc
tatgagggaatcaaagtcatatttcaggtatccttggctgtgctacatgctaacatggag
aagttgttaaactgcactgatgagggagaggccatgaccatactcggaaggtatctggat
aatgttgtgaacaagcaaacggtgtctccacccatcccccatctgcatgcactattaacc
agcggagatgcacctcccccagagattgatatatttgatctcattaagatgtcctacgag
aagtttggcagtctgcgtgctgatgtcattgagcagatgaggttcaaacaaaggttaaag
gttattcagtctttagaggatacggctaagaggagtgtggtgagggccattatgacagac
tcagccttcagcattgaagagctggaggagttgtatgttctgttcaaggctaaacacatc
atgagctgctattggggtgccagtagcactgctgcagagcgtcatgaccctagtttgccc
tatttggagcagtatcggattgactgtggccagttaattcagctcttctcagccttggca
ccttggagctgtggcatgcacacttccacacttgctgcccgcttatttcgcctgcttgac
aacaacaaagactcccttatcaactttaaagagtttgtcacaggcctgagtgggatgtat
catggcgacatgactgagaaattgaagctgctgtacaagttacacctgcctccagctttg
tgcccagaagaggcagagtctgcacttgaggctactcatttctttactaatgatgacaca
ccgcaagatcatccctccttctctcatgtagacttcctggtccaggaagtcacttcagct
gaggaggtaaaggaagtggctgatacaggaggagattctgaagagaagaaagaggaaaag
gtgaaggactataagtattatttgcgaatgtgggcaaaagaaagggaacccaagaaagag
accatcaaagatctacccagaatgaaccaggagcagtttatcgagctgtgcaaaacgctc
tataatatgtttagtgaggaccccctggagcaggagctctatcatgccattgctacggtt
gccagcttattactgcgcattggagaagtgggcaaaaagttcagcagcaacggcagcaag
aaatgtgatacacaggctcaaccagtggtagagtctccaggaaaagaggacagttttgga
gaggctaattctggacagtccctggtctcaaaggccctggcagaggcccagctggagagt
tcccctcctccagccaacgggtctgatgaagatgtgaaagacgacacgtctatttcatcc
tactctgtggtcagcgccggatctctgcagtgtgaagacatcgcagacgataccgttcta
atcggatgtggagtggatggagctggaggtggaagtgacagtaggcgtggcagcgcaccg
gatggcgattggtcgatctcattcgagcaggtgcttgcatcgctgctgaccgaaccggct
ctggtaaactactttgaaaaaaagcatgacatcaggagcaagatggctgcctgtaaggct
caaagggcagttgaaaggcagatcagttcgtccagcgaccatgagctagctcagctctcc
acctga
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