Silurus meridionalis (southern catfish): 124392092
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Entry
124392092 CDS
T08004
Symbol
lrrtm2
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 2
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
124392092 (lrrtm2)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
DHU1_N
Calcyon
DUF6587
Syndecan
Motif
Other DBs
NCBI-GeneID:
124392092
NCBI-ProteinID:
XP_046714729
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Position
10:complement(22912324..22916286)
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AA seq
542 aa
AA seq
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MGFHSRWPLVGRAPAALCVISMLLCLPLTSCTACPQKCRCEDLQFYCDTQGLLAPPDGVD
RGALGLSLRHNSINELRPDQFFGFTQLTWLHLDHNQILTVHEDAFQGLYKLKDLNLSSNR
ITKLPNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNFLRTTPVRAFWDC
RSLEYLGLNNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQWNK
INNLTCTMEWEWTTLEKLDLTGNEIRTLTPEVFETLPNLQVLLLDNNKLTSLDIQTTDMW
KSLNIIGLSSNLWECTKKICNLAGWLSKFKGRWEHSILCHSPEFTQGEEILDAVHGFQLC
QNISAPVVLSSTTIEATLPQQFTSSFFGNMQTPTQDFYPDDFGSFTVVTTTTSTPQTPQT
TTASTTADAEDMTEDYGMMDNTQLTQSVIIGTMALLFCFVLIVFVVYISRKCCPPTLRRI
RHCSAIQNRRQMRTQQRQPMADLATQVPYNEYEPTHEEGALVIMNGYGQCKCQQLPYKEC
EV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggtttccattcaaggtggccattagtgggacgagcaccagcggcactttgtgtgatc
agcatgctcctgtgcctgcctctcacatcgtgcacagcctgccctcagaaatgccgctgc
gaggacctgcagttttactgcgacacgcagggactcttggcgcccccagacggcgtcgac
agaggagccctgggactctcgctccggcacaacagcatcaacgagctgagaccggaccag
ttcttcggcttcacccagctaacgtggcttcacttggaccataaccaaatactcaccgtg
catgaggatgccttccaggggctctacaagctcaaggacttgaacttgagctcgaaccgc
atcaccaagctgcccaacacaacctttatccacctcatcaacctgcaaatcctggatcta
tccttcaaccagatgaccgctctggagcccgagctctttcacgggcttcgcaagctccag
atccttcacctgaggtctaacttcctgaggaccacgcctgtcagagctttctgggactgt
cggagtctggagtacctcggtttaaacaacaaccggcttcggagcctggctcggaacggg
ttcgccgggttgataaagctacgggaactccatttggaacacaaccatttgaccaagatc
aacctggcccacttcccgcgtctcgtcgctcttcagttcctctatttgcagtggaacaag
attaacaatttgacctgtaccatggagtgggagtggaccactctggaaaaactggattta
accgggaatgagattcgcacgctaacccctgaggtgtttgaaactttaccgaaccttcag
gttttactgctggataacaacaagttgaccagcctagatattcaaaccacggatatgtgg
aagtctctgaacatcatcgggttgtcgagcaacctttgggaatgtacaaaaaagatttgc
aacttggccggttggcttagtaagtttaagggccgatgggagcattcgatcctctgccac
agccccgagttcacgcagggcgaggaaatactagacgcggttcacggattccagctctgt
cagaacatctcggcacccgtcgtactgagcagcaccacgattgaggccacgttaccccaa
cagttcacgagctcgttttttggaaatatgcagacgccgacacaggacttctacccggac
gatttcgggagctttaccgtcgtcacgactaccacctccacccctcaaactccgcaaacc
accacggctagcaccaccgccgacgcagaagacatgaccgaggactacgggatgatggac
aacacccagttgacacagagtgtcattataggtactatggcccttttgttttgcttcgtt
ctcatcgtttttgtagtgtacatctctcggaagtgctgccctcctacgctacgccggatc
cgccactgctcggccattcaaaaccgccgacagatgaggacccagcagaggcagccgatg
gcggacctggctacacaggtgccctataacgagtacgagccgacgcacgaggaaggtgcg
ctagtgatcatgaatggctacgggcagtgcaagtgtcagcaactgccttacaaagaatgt
gaagtataa
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