Silurus meridionalis (southern catfish): 124392153
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Entry
124392153 CDS
T08004
Symbol
ap4e1
Name
(RefSeq) AP-4 complex subunit epsilon-1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
124392153 (ap4e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124392153 (ap4e1)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Others
AP-4 complex
124392153 (ap4e1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
CLASP_N
INTS1_R4
SR-25
Motif
Other DBs
NCBI-GeneID:
124392153
NCBI-ProteinID:
XP_046714833
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All DBs
Position
10:6083209..6097437
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AA seq
1139 aa
AA seq
DB search
MSDVVEKTLNALPGLLSLDSHPGASKLSPTSKLGHLVRSITELTSKNEEEKLITKELAAI
KDQLSSPNTTMRQMRELMVRAMYCEMLGYEATFAYIHAIKLAQQGTVLEKRVGYLAVSLF
LNESHELLLLLVNTVLKDLQSTNLIEVCMALTVVSQIFPKDMIPSILPLVEEKLSHQKEI
IRQKAVLALYKFYLIAPNQVQHIHSKFRKALCDKDPGVMMSSLHIYLRLIKENPDNYKEL
TSSFVTILRQVVGGKLPLDFNYHGVPAPWLQIQLLRILSLLGKEDQSASELMYEVLDESL
RRAELNHNITYAILYECVKAIYTVYPKAELLEKAARCIGNFVLSPKINLKYLGLKALTYV
VQYDANLALQHQMTIIECLDHSDLIIKRETLELLFRITNAQNVTVIVEKMLRFLRLCDDS
YTIIDLVGKVAELAEKYAPDNEWFIQTMNEVFSLGGDFMKPDIPNNFLRLLIEGSDAEED
DRQLKLYAVDLYIAVLKGDCSHLPQCFLQVISWVLGEYSCMREGLDQCEVIVLLKKLLEQ
RGVSSETRSWVLGALTKLCQSSGSAELVLELTESLASSLDTVLRQQANELQGLSRDSQLH
ARLLHQFRDSMQVDSSLSFLDGFVSEALAAGAAPYKPPHQRQEELSQQRALSLEPYGLSL
PVSMSSCTLMDRQSPTVLSMSSGLSGNSTEPALRTGASTLILDGVKRVWGKEGYLLQKES
SKTSAVVDTPNTVHQSSNQEVAATDASQPELNHYPKPEPSHMDQEKQQLASSLFVGLGSQ
SSTSLLEKTEASAPRFRRKHRQHGSASSSSTSEASTSSSHSSRRRTDALYDGLLDEEQVT
HIQNSNHTLTSTTVNGSCDSTQSSQTANGLGEREVCTVDMLMIRPNALAEEALVVPQNGC
SDLVVLKLPSELDDLPHSDIITLTSDPRLSISCCRVYRDDALLLALFICNTTEMPLCDVT
VELSCEELEMTSLRGNVIECLEGRDSSVCRYTLLMERPHIQVTFKGAVLYQTQSGHLHTL
QFSGKLSTTDFIRPLMLSTEEYGKLWLSFSNDVKQNLKLLTGTESPLITTLNALQENLRI
HTVHIIGSEGIVACRLLNGAPCLMHCRVHGASLAVRLRSPLPAFPDCLLYHCQRVLQEP
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtggttgagaagaccctcaatgctctcccgggtctgttgtctctcgattct
caccctggagcctccaaactttcccccacctccaaactaggacacctggtcagaagcatt
actgagctgacatccaaaaatgaagaagaaaagctcatcactaaagagcttgcagctatt
aaagatcagctttcatctcctaatactacaatgagacaaatgagggagctgatggtgaga
gccatgtattgtgagatgctcggatatgaagccacttttgcttacatccatgccatcaaa
ctggcccagcaaggcacagtactggagaagagagttggataccttgcagtgtcacttttt
cttaatgagagtcatgaactgctgttactgctggtcaatacagtattgaaggatcttcaa
agcactaacctcattgaggtctgcatggctctgactgttgtaagtcagatatttcccaaa
gacatgatcccgtccattctgcccctggtagaagagaagctgtctcatcaaaaggaaatc
atacgacagaaagcggtgcttgctttgtacaagttctacctgatcgccccgaatcaagtg
cagcatattcacagcaagtttcggaaagccttgtgtgacaaagatccaggagtcatgatg
tcctctttacacatctacttgcggttgataaaggagaaccccgacaattacaaggagctg
acgagcagctttgtaaccatcttgaggcaggtggttggagggaagctaccacttgacttt
aactaccacggtgtccctgcaccatggctgcagatccaactgctccgtatcctgtctctg
ctggggaaagaggaccaaagcgcgagtgagctgatgtacgaggtgttagacgagtctctg
cgacgagccgaactgaaccacaacattacttatgcaattctgtacgagtgcgtgaaggcg
atctataccgtataccctaaagccgagctgctggaaaaagcagcgaggtgcataggaaac
ttcgtgctgtctccgaagatcaacctgaagtacctggggttgaaggctttaacatacgtg
gttcagtatgacgccaacctcgctctgcagcaccagatgactattatagaatgtttggat
cattcggatctcatcatcaagagagagaccttagagctgctcttcaggataacgaatgcc
caaaacgtcactgtgatcgtagagaaaatgttgcgattcctccggctttgtgacgatagc
tacaccatcatcgatcttgtgggaaaagtggctgagttggctgaaaagtatgctccagac
aacgagtggtttattcagactatgaatgaagtgttctctctcggcggtgacttcatgaag
ccggatattcccaacaacttcctcaggctgctcatagagggctcggatgcagaggaggac
gaccggcagctcaagctatatgcagtggacttgtatatagcagtcctgaagggtgactgt
tctcatttgccccagtgcttcctacaagtcattagctgggtgcttggagagtactcctgc
atgagagaaggcctggaccagtgtgaggtcatagtgctcctgaagaagttgttagagcag
agaggagtgagctcagagaccaggagctgggtgctgggtgccctcactaagctgtgtcag
agctctggatctgctgagcttgtactggagctgacggagagcttggcttcctctctggac
acagtgctgcgccagcaggctaatgagctgcagggcctcagccgggactcgcagctccac
gctcggttactgcaccagttcagggacagcatgcaggtggactcctctctctcatttctg
gatggctttgtatctgaagctctagctgcaggagctgctccgtataaaccccctcatcag
agacaggaagagctgagtcagcagagagcactaagtttagagccgtatggactgtctctt
cccgtgagcatgtcctcatgcacgctcatggacagacagtccccaaccgttctctctatg
agctctggtctctctggtaacagcaccgaaccggcacttaggacaggagcaagcacactc
atattggatggtgtgaagagagtgtgggggaaggagggttatctgctccagaaagagtct
tctaaaacctcagcagtagtagacacaccgaacactgtacaccagtcatccaaccaggaa
gtagctgcaacagatgcttcccagcccgagcttaatcactatcccaagcctgagccttca
catatggaccaggagaagcagcagctggcatcatctctgtttgttggactgggatctcaa
agctccacatctctgttggagaaaactgaggcttccgctccacgattcagaagaaaacac
aggcagcacggatcagcatcatcgtcgagcaccagtgaggcatctacgagctcctcacac
tcttcccggcgcaggacagacgccttatacgatggcttgctggacgaggagcaggttaca
cacatacagaactcaaatcacaccctgacgtccactacggttaacggcagctgtgattcc
acgcagtccagccagaccgctaatggtctgggtgaaagggaagtgtgcactgtggatatg
ctgatgattagacctaacgctttagcagaagaagccttagtagtgcctcaaaacggctgt
tctgatctcgtcgttctgaagttaccatctgaactggatgacctgcctcattctgacatt
ataaccttgacttctgacccccgcctgtccatctcttgctgccgcgtgtacagagacgat
gccctgctgctcgcgctgttcatttgcaacactacagagatgccactctgcgatgtcact
gttgaactgagctgcgaggagctggagatgacgagcctaagaggaaatgtgatcgagtgt
ctggagggcagagattcctcagtgtgtcgttacactcttctgatggaaagacctcacatt
caagtgaccttcaaaggagcagtgttgtaccaaacacagtctggacatttgcacactctg
cagttctctggtaaactctccaccactgactttataaggccgctgatgctgagcacagag
gagtatgggaaattgtggctttccttctctaatgatgtgaagcagaacctaaaactacta
acaggcactgaaagtcctcttataaccacccttaatgctcttcaggaaaacctccgaata
cacacggtgcacatcatcggttcggagggtatcgtggcctgtcgtttgctgaatggcgcc
ccctgtctcatgcactgtcgtgtacacggtgcttctctggctgtacggctgcgttctcct
ctgcctgctttcccagactgtctcctctatcactgccagagagtcctgcaagaaccctga
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