Silurus meridionalis (southern catfish): 124392154
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Entry
124392154 CDS
T08004
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124392154 (cdhr5b)
Cell adhesion molecules [BR:
smeo04515
]
Cadherins
Cadherin related
124392154 (cdhr5b)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
124392154
NCBI-ProteinID:
XP_046714834
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Position
10:complement(6102773..6115537)
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AA seq
756 aa
AA seq
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MDLNHLKLVQIIFFMLAVFTINTTGQICSAPIAVNFPENNNINATVATIRIDEGVRLSIT
ANPDNAFGINGNLLVAKKILDYESLPEGGGLSVSILCEKDGASQLSIRVFVNVENINDNA
PFFSQNPFFLQVAELTKINTSVDKIEATDLDGDRLYYSLIAPLDEFGLQADSNPIILVKK
VLDYDTVKEVTLVLFAQDTPLSSTLTPSHTASTTVVVTIVDINNRPPWFQPCIEATVGIT
KICVTSGYTGNVNLNEQMAGALTLNPGPLHAIDGDKGRNDPIRYTIIGGNVNETFVIDQN
SGNITMQKPVGVAGSIILTVMAYELENPDQFATTTVALQVVISSKHPPQFVKPEYVGFIS
EDAGIGSLVLESKSSKIPLQVRATDADFSDGVNPEIKFEVPAGSDFRITPEGFIIMTRVA
SPGKVDLQIRVVDATNGESSTANLSVEVTPGVTTTEMPTTDSPTTTAITTTLATSTALTN
NISTDASTAITTTLAISTAINDNTSTDTIVTVTEITSRPHTDTTHPDTTRSSYTDGLPLP
SGDFRTEDMIALGVSLAIALLLCFVVIGFLAYNLRRYTVDWKKLSEVSIFRSSLSGGSGG
PKNGVEYTNEGFHGDEDTDSMKSKQEAKLAMPRSSEQNRSVPEVLGTQHSASALQSKNAD
DNSLSIDSNSQNASDNTDNEKEVKPILTKERRMEEGYKAVWFKEDIDPNDKEEVVISDRD
QDIDHDDDYHDDDDDSMEEEEQEEEDDEEDAKFAVL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaatcatcttaaattggtccaaatcattttctttatgctggcagtgttcacc
atcaacactactggtcaaatttgctcagcaccaatcgcagtgaattttccggaaaacaac
aatattaatgctacagttgccacaataagaattgacgaaggagtccgacttagtattaca
gcaaatcctgataatgccttcggaataaatggcaatttgctcgtggcaaagaaaatactt
gactatgagagcctgcctgagggtggtggcctaagtgttagcatactgtgtgagaaggat
ggggcaagtcagctaagcatacgggtatttgtgaatgtggaaaatatcaatgacaacgct
ccattttttagccagaatccattttttctgcaagttgctgagctaacgaaaatcaataca
tctgtggacaaaattgaggctacagacctcgatggagatcggctgtattacagtttaata
gctccattggacgaatttgggctgcaggcagacagtaacccaataattctggtgaagaag
gttttggattatgatactgttaaagaagtcactcttgtactctttgctcaggacacgccc
ctatcttcaacattgacaccttcacatacggcctctaccactgttgttgtcactatcgta
gacatcaataatcgacccccatggttccagccctgcatagaggccactgttggtataacc
aaaatctgtgttacctccggatacacagggaatgtcaatttaaatgaacaaatggctggt
gcactgaccctgaatcctggtccactgcatgctattgatggagacaaaggaaggaatgac
ccaatcagatacacaattattggaggaaatgtgaatgaaacattcgttattgatcaaaac
agtgggaatattacaatgcagaagccagtgggtgtagcagggtccatcatactgacagtc
atggcatatgagttggagaaccctgaccagtttgccaccacaactgtcgcacttcaagta
gtgataagtagcaagcacccaccgcagttcgtcaagcctgaatatgtgggcttcatctca
gaggacgcaggaatcggcagcctagtgctagaaagcaagtccagtaaaatacctttacag
gttcgggccacagatgcagacttctcggatggagtaaaccctgaaattaaattcgaggtt
cctgcaggcagtgactttagaatcactccagagggcttcataatcatgacaagagttgct
tctcctggcaaagtggacttgcaaataagagtagttgatgcaacaaatggtgaatcgagc
acagccaatctttctgtagaagtcactccaggcgtcaccactacggaaatgcccacaacc
gatagtcctactaccactgccattacaacaacactggccacaagcactgccctaaccaat
aatataagtactgatgcctccactgccattactacaacccttgctataagtactgccata
aacgataacacaagtacggataccatagtcacagttacggaaatcacctccagaccacac
acggatactacacaccctgatactactcgcagttcttacacagacggtttgcctttgcca
tcaggtgattttaggacagaggacatgatagcactgggggtgagtctggctatagcgctg
ctgctctgctttgtggttattggttttctggcctacaacctcagacgctacactgtagac
tggaagaagctgtcagaggtcagcatcttccgcagttcgctgagtggaggttcaggtggg
cctaaaaatggagtggagtacaccaatgagggctttcatggtgatgaagacacggacagc
atgaagtcgaagcaggaggcaaagttggccatgccacgaagctcggagcagaaccgcagc
gttccggaggtactggggacgcagcacagcgcttcagccctgcagagcaaaaacgccgat
gataactcgctttccatagactccaacagccaaaatgcctcagacaatacagataatgag
aaagaggtgaaacccattctcaccaaggagcggcgcatggaagaaggctacaaagccgtg
tggtttaaggaagatattgacccgaatgacaaggaggaagtggtcatttctgacagagac
caagacatcgaccatgatgatgattatcatgatgatgatgatgattctatggaggaggag
gagcaagaggaagaagatgacgaggaagatgctaagtttgctgtattatag
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