Silurus meridionalis (southern catfish): 124392211
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Entry
124392211 CDS
T08004
Symbol
cd44b
Name
(RefSeq) CD44 antigen
KO
K06256
CD44 antigen
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124392211 (cd44b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124392211 (cd44b)
04090 CD molecules [BR:
smeo04090
]
124392211 (cd44b)
00535 Proteoglycans [BR:
smeo00535
]
124392211 (cd44b)
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124392211 (cd44b)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124392211 (cd44b)
Exosomal proteins of other body fluids (saliva and urine)
124392211 (cd44b)
Exosomal proteins of colorectal cancer cells
124392211 (cd44b)
Exosomal proteins of bladder cancer cells
124392211 (cd44b)
CD molecules [BR:
smeo04090
]
Proteins
124392211 (cd44b)
Proteoglycans [BR:
smeo00535
]
Cell surface proteoglycans
Others
124392211 (cd44b)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Hyaluronan
Cell surface receptors
124392211 (cd44b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
DUF6480
MAP17
EssA
Orf78
Motif
Other DBs
NCBI-GeneID:
124392211
NCBI-ProteinID:
XP_046714934
LinkDB
All DBs
Position
10:complement(12844413..12860003)
Genome browser
AA seq
418 aa
AA seq
DB search
MWILLFGLTSGLVASSWANSVQDVTLRGCSYVGVFHIQGLDRYTLKFDEAKELCEALGTT
LASVEQLTAAYDKGYESCRYGWVSNGNAAIPRQEPNSLCALNQTGVITIVPTDIDPYDAY
CYNKSDLLVGNCENEIKYLQNGPRSAENNESQDLNHTMSPTSPSIPVTSVEIQTDSTVND
VTEPTHGIEKTDFSPINNQYTQDVSSTQPSITNTEREEEGLMTSTGSYIKNENAADQSNT
SIVQDANGSGMGETTNIISNDSNNEDTRLEGHDTTAEDGFKTQTAETAVGEPVNEDHTKH
SRGRMGPGQSTPPEEQNDSKSDWLVILLVVVVVVLLVLVAIAVATSNRWCGRRRTLIITT
KSSIEGNGTAASTATPEAQEREQEMVTLMNKEKIQENGNTEEFTVIVLEESPEKNTQA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtggattctactgtttggactcacctctggattggtggcctcatcttgggcaaactct
gttcaagatgtgacattacgaggctgcagttatgtgggagtatttcatattcaaggtttg
gatcgatacactttgaaatttgatgaagccaaggaactatgtgaagcgctgggaacaact
ttggccagtgtggagcagttgactgctgcctatgacaagggttatgagagctgcaggtat
ggctgggtcagcaatggaaacgccgccattccacgccaggagccaaacagcctgtgtgca
ttgaaccagaccggcgtcatcactattgtacctacagatatagacccctatgatgcctac
tgctataataagtcagatctgttggtcggaaactgcgaaaatgaaataaaatatctgcag
aatggacctcggtctgctgagaacaatgaaagccaagatttgaaccacaccatgagtcca
actagcccctctattccagtgacttcagtggagatacagaccgatagcacagttaatgat
gtaactgaaccgacacatggcatagagaagacagatttctctccaatcaacaatcaatat
acgcaagatgtatctagcacacagccttccatcacgaatactgaaagagaagaggaaggt
ctgatgactagcactgggagttatattaaaaatgaaaatgctgccgatcagtctaacacg
tccatagtccaagacgctaatgggtcaggaatgggagagacaacaaacatcatttcaaat
gattctaacaatgaagacacaagactagagggtcatgatacaactgctgaggatggtttc
aagactcaaactgcggagaccgctgtaggtgagccagtgaatgaagaccacactaaacat
tcgagagggcggatgggaccaggccagtctacaccacctgaagagcagaacgacagtaaa
agtgattggttggtcatcctgcttgtcgttgtggtcgttgttttgcttgttcttgtagca
attgctgtggcaacaagtaacaggtggtgtgggaggagacggacacttataatcaccact
aagagcagcatagagggcaacggtacagcagcatcaacagcaaccccagaggctcaagag
agagagcaggagatggtgacactcatgaacaaagagaagatccaggagaacggcaacacc
gaggagttcactgtgatcgttctggaggagtcaccagagaaaaacacacaggcatga
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integrated database retrieval system
