Silurus meridionalis (southern catfish): 124392256
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Entry
124392256 CDS
T08004
Symbol
mars2
Name
(RefSeq) methionine--tRNA ligase, mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00450
Selenocompound metabolism
smeo00970
Aminoacyl-tRNA biosynthesis
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
124392256 (mars2)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124392256 (mars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smeo01007
]
124392256 (mars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124392256 (mars2)
Enzymes [BR:
smeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
124392256 (mars2)
Amino acid related enzymes [BR:
smeo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124392256 (mars2)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124392256 (mars2)
Prokaryotic type
Other AARSs
124392256 (mars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
FZ_RECK
Anticodon_1
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
124392256
NCBI-ProteinID:
XP_046714999
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All DBs
Position
10:complement(18512459..18518561)
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AA seq
604 aa
AA seq
DB search
MMMISQGSVVQSRILLRVLKHGRLGERTDLHPPLPVKRLHTDPVVRRRGEPRRSHYISTP
IFYVNASPHLGHVYSAVTADCLHRYKLLQGFDSKFSTGTDEHGLKIQQAASAAGKEPLSF
CTEVSHRFRDTFRSCNIAYTDFIRTTEDRHRHAVEHFWTKLFDKGFIYEGIYEGWYSTPD
ESFLTPNQVTNGTDSMGREIKISTESGHKVEWMKEHNYLFRLSDFRTSLQEWLRSNPKAI
QPKKFHHLVLQWLESELPDLSVSRQRSRLQWGIPVPGDPEQTIYVWLDALVNYLTVAGYP
EKYSEWWNVVHHVVGKDILKFHAIYWPAFLLAAELPLPQAIYVHSHWTAQGKKMSKSLGN
VVDPLESLKRFTMDGLRYFLLRQGVPDMDCDYDDDKVVKLCNSELADSLGGLLNRCTAPS
LNPEQVYPLFCNISFPKVCGGRAVSEDYKLVEAVSRLPVLVKQNFDNLHMYKALEAISAC
VRLTNSFVQRHTPWKLDCTETEDKLWHDTILHVSMECLRIYGVLLQPVVPAIADKILSRL
GVTSAERNWDNTHDFLSKFEGRHCPYEGRVLGPDTGVLYRRIERNIPKQNAEGGQKGKIK
QVSP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatctctcagggttcagtggtccagagcaggattctgctccgggtgttaaag
cacggccggctcggagaacgaaccgatttgcatccgccacttccggtaaagaggctccac
acagacccggttgtgcgacgcagaggagaaccgcgaaggtcacactacatcagcaccccg
atcttctacgtgaacgcttctcctcacctcggacacgtttattccgccgtgacagccgac
tgtctgcaccgatacaaactccttcagggcttcgactccaagttttctacaggtactgat
gaacacgggctgaaaatccaacaggcggccagcgcagccgggaaagagccgctcagcttc
tgcaccgaggtatctcacaggtttcgtgacacgttcaggagctgtaatatcgcatacacc
gacttcatacggacgacagaggacagacacagacatgcggtggaacatttctggaccaag
ctgttcgacaaaggcttcatctatgaagggatatatgaaggctggtactccacaccggac
gagagctttctcacacccaaccaggtgaccaacggcacagactccatgggcagagagatc
aaaatctctaccgagagtggacataaggtggagtggatgaaggagcacaactatctcttc
cgcctctccgatttccggaccagtctccaggagtggttgaggtcaaaccctaaagccatt
cagccaaagaagtttcaccatctcgtgcttcaatggttggagagcgagctacccgattta
tcagtgtcgcgccagaggagccgtctgcagtggggcattccagttcccggagatcccgaa
caaacgatctacgtgtggctggacgctttggtgaactatctgaccgttgcagggtatcca
gagaaatactccgagtggtggaacgtcgtccatcacgtcgtaggcaaagatatattgaag
ttccatgctatatattggccagcgtttctcttggctgcagaactgccccttcctcaggcc
atatacgtgcactctcattggacggctcagggaaagaaaatgtccaagagtctcggcaat
gtagtggatccactcgagagtttgaaaaggttcaccatggacgggctgaggtatttcctt
ctcaggcaaggagttccagatatggattgcgactatgacgacgacaaggtggtcaagttg
tgcaatagcgaactggccgattctctcggtggtcttctcaaccgctgtaccgcaccctcc
ctcaacccggagcaggtttatcctctattctgcaacatctccttcccaaaagtgtgcggt
ggaagagcagtttccgaggattataaattggtggaggccgtttccaggcttcctgttttg
gtgaagcagaattttgacaacctgcacatgtataaagccctggaagcaatcagcgcatgc
gtacgcctgaccaacagcttcgtccaaagacacacgccgtggaaactcgactgcacagag
acagaggacaaactctggcatgacaccatactgcatgtgtctatggagtgtctcagaatc
tacggcgttctcttgcagcccgttgtgcctgcgatagcagataaaatcctgtccaggctc
ggggtgacgtctgccgagaggaactgggataatacccacgatttcctgtccaagtttgaa
ggaagacattgtccttatgaaggacgagtgctaggtccagacactggggtgctttacaga
cgtatcgagaggaacattccaaagcaaaatgcagaaggaggacaaaaaggcaaaattaaa
caagtctcgccatag
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