Silurus meridionalis (southern catfish): 124392259
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Entry
124392259 CDS
T08004
Symbol
rragcb
Name
(RefSeq) LOW QUALITY PROTEIN: ras-related GTP binding Cb
KO
K16186
Ras-related GTP-binding protein C/D
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04140
Autophagy - animal
smeo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
124392259 (rragcb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124392259 (rragcb)
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GFIT
Motif
Pfam:
Gtr1_RagA
Arf
Roc
SRPRB
GTP_EFTU
MMR_HSR1
Ras
AAA_14
Motif
Other DBs
NCBI-GeneID:
124392259
NCBI-ProteinID:
XP_046715002
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Position
10:complement(24054875..24063361)
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AA seq
434 aa
AA seq
DB search
MSGQYGGETLPGAGANLHPPHHTLLHHPHLPHHPQLCTEEDFCKDSFSFGVDEDEEDEDE
EDMARALDTDKPRILLMGLRRSGKSSIQKVVFHKMSPSETLFLESTNKIYKDDISSSSFV
QFQIWDFPGQVDFFDPTFDYEMIFRGTGALIFVIDAQDDYMEALGRLHLTVSRAYRVNPH
INFEVFVHKVDGLSDDHKIETQRDVHQRANDDLTDAGLDQLHLSFYLTSIYDHXIFEAFS
KVVQKLIPQLPTLENLLNIFISNSGIEKVFLFDVLSKIYVATDSSPVDMQSYELCCDMID
MVIDVSSIYGLKEDGSGSAYDKDSLAIIKLNNTTVLYLKEVTKFLTLVCILREESFERKG
LIDYNFHCLRKAIHEVFEVTVVRRNCVEDELYSPGVKAPLLNGTPRGPVWPAAFLGRGGA
FKQADNTSASGVSG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggacagtacggaggagagactctgcctggcgctggggcaaatcttcatcctcct
catcatacacttcttcatcatcctcaccttcctcatcatcctcagctgtgtacggaggag
gacttctgtaaggatagtttcagtttcggtgtggatgaagatgaggaggatgaagatgag
gaggacatggcacgtgcgctggacactgacaaacccaggattctgctgatgggactgaga
cgcagcgggaagtcctccatacagaaggtggtcttccataagatgtcccccagtgagact
ctgttcctggagagcactaataagatctataaggacgacatcagcagcagctccttcgtg
cagttccagatctgggattttccgggtcaggtggacttcttcgaccccaccttcgactac
gagatgatcttcagaggcactggagcgctgatcttcgttattgatgctcaggacgactac
atggaggctctgggacgtctccatctcaccgtgtcccgggcctacagggtgaacccccac
atcaacttcgaggtgtttgtgcacaaggtggacggtctctcagacgaccacaagatcgag
acgcagagagacgtccaccagagggcgaacgacgacctgacagacgccggcctcgaccag
ctgcacctcagcttttacttgaccagtatctacgaccacncgatatttgaggcgttcagt
aaagtggtgcaaaagctcatccctcaacttcccacactggagaaccttctcaacatcttc
atctcgaactcagggattgagaaggtgttcctgtttgatgtactcagtaagatctatgtg
gctacagacagttctcctgtggacatgcagtcatatgagctgtgctgcgacatgatcgac
atggtcatcgacgtttcctctatatacgggttgaaggaggatggcagtggcagtgcgtat
gataaagactctttggccatcattaagttgaacaacaccactgtgctctacctgaaggag
gtcaccaagttcctcacgctggtgtgtatcctgagagaggagagcttcgagaggaaaggt
ctgatagactacaacttccactgtttgaggaaggctattcacgaggtgttcgaggtgact
gttgtccggaggaactgtgtagaggatgaactctactctcctggagttaaagctcccctg
ctcaatggcacccctagaggcccagtgtggcctgcagctttccttgggaggggcggagct
tttaaacaagcggacaatacgtcagcttcgggtgtgtcggggtga
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