Silurus meridionalis (southern catfish): 124392260
Help
Entry
124392260 CDS
T08004
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03320
PPAR signaling pathway
smeo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124392260 (pparab)
03320 PPAR signaling pathway
124392260 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124392260 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smeo03310
]
124392260 (pparab)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124392260 (pparab)
Nuclear receptors [BR:
smeo03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
124392260 (pparab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124392260
NCBI-ProteinID:
XP_046715003
LinkDB
All DBs
Position
10:4827237..4854329
Genome browser
AA seq
462 aa
AA seq
DB search
MVDMESPYSPPSHLEDSVLYRDLVGAEDLQDISKSINEEALSNLDVSEYHSTGRCSSSES
STVPDALTPASSPSSGVCGAIAGQEDFTSASLNLECRVCADRASGYHYGVHACEGCKGFF
RRTIRLKLEYDKCERHCKIQKKNRNKCQYCRFQKCLAVGMSHNAIRFGRMPQSEKLKLKA
EILTGEKEVENPQLADQKTLAKQIYEAYLKNFSMNKAKARTILTGKTNTPPFVIHDMETL
HLAEQTLVAKMVGSAGGLLEKDVEVRIFHCCQCTSVETVTELTEFAKSVPGFCNLDLNDQ
VTLLKYGVYEALFAMLASCMNKDGLLVAYGSGFITREFLKSLRRPISDMMEPKFQFAMKF
NALGLDDSDLALFVAAIICCGDRPGLMNVPYIERMQESIVHVLQLHLQNNHPDNTFLFPN
LLQKLADLRQLVTEHAQLVQEIKKMEDTSLHPLLQEIYRDMY
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggtagacatggagagcccttacagtcctccgtctcatctggaggactctgtgctctac
agggacctcgtgggtgccgaagacttgcaagacatctccaagtccatcaatgaagaggca
ctcagcaacttggacgtctccgagtaccactcgactggccggtgctccagctctgaaagc
tccacggtgccagatgctctgaccccagcctcgagtccatcttcaggtgtgtgtggggcc
atagcaggacaggaggactttacgtctgcttctctaaacctggagtgtcgcgtgtgcgca
gaccgagcctcgggatatcactatggcgtccatgcctgtgagggttgcaagggcttcttc
aggcgcaccattcgcctcaagctagaatatgacaagtgtgaacgccactgcaaaatccaa
aagaagaaccggaacaagtgccaatactgccgctttcaaaagtgcctagctgtgggcatg
tcccacaacgctatccgctttggccgaatgccccaatccgagaagctgaagctgaaggca
gagatattaactggggagaaggaggtggagaatcctcagttagctgaccagaaaactttg
gccaagcaaatctacgaggcttatctcaagaacttcagcatgaacaaagcaaaggcacgg
accatcctgacaggcaaaacaaacacaccaccctttgtaatccatgacatggagactctg
catctggccgagcagactctggtggctaagatggttggcagtgcaggtggactgctcgaa
aaggacgtagaagtgcgaatcttccactgctgccagtgcacatcagtggagaccgtcaca
gagctcacagagtttgccaagtccgttccaggcttctgcaacctcgacctaaatgaccag
gtaacacttttaaagtatggtgtgtacgaggcactttttgctatgctggcctcttgcatg
aataaagatggcttgctggttgcctacggcagtggcttcattacaagagagttcctcaag
agcctgcgacgacctatcagtgacatgatggagcccaagttccagttcgccatgaagttc
aatgcactgggactggatgacagcgacctggctctgtttgtagcagccataatctgctgt
ggagatcgtccaggcctgatgaatgtcccatacatcgagcggatgcaggagagcatcgtc
catgtgctgcagctccacctacagaataaccacccagacaataccttcctgtttcctaac
ctgctgcagaaactagctgatctgcgtcaactagtcacggagcatgcccagttagtgcag
gagatcaagaaaatggaggacacatcactgcatcctctgcttcaggaaatctacagggac
atgtactaa
DBGET
integrated database retrieval system
