Silurus meridionalis (southern catfish): 124392316
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Entry
124392316 CDS
T08004
Symbol
ireb2
Name
(RefSeq) iron-responsive element-binding protein 2 isoform X1
KO
K22416
iron-responsive element-binding protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124392316 (ireb2)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124392316 (ireb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
BSD
Motif
Other DBs
NCBI-GeneID:
124392316
NCBI-ProteinID:
XP_046715147
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All DBs
Position
10:1255253..1283305
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AA seq
977 aa
AA seq
DB search
MSEIRRETGGYYTDHPFGHLIDSIPNEKNEVRKYFNPQKLGDPKYERLPYAVRVLLEAAI
RRCDGFYVKQEDVYSILNWEERQNEVEIPFPPARVLLQDFTGIPAMVDLAAMRDAVAKIG
VDPDLINPKCPTDLIVDHSLQIDFSKCSIQNAPNPGGGDGPGPRSVPGRPAPRGHHASSS
GQCGGQRGGCSKGSCSDPPTRATAVQIENTPLLCPFHLKPVSEPETALKNQELELIRNKE
RLEFFKWCSKAFQNVSVVPPDIGSVHQVNLEYLSRVVHESEGFVYPDSVVGTDSHTTMIN
GLGILGWGVGGIESEAVMLGQPVSFTLPQVVGCKLIGSVNSLATSIDIVLGITKHLRQAA
IAGRFVEFFGPGVTQLSAADRTTIANMCPEYSATVSFFPVDDVTIKHFKQTNFTEEKLEF
LETYLKSMKLFRASADQSEDPHYTEVIEINLSSIVPYVSGPKRPQDRVSVTCMKDDFLNC
LNEKVGFKGFHIPKEKQNTAVPFLHAGTEYSLSHGSVVIAAVISCTNNCNPSVMLTAGLL
AKKAVEAGLCVKPYIRTSLAPGSGMVTHYLNASGVLPYLSQLGFEVIGYGCATCVGNTAP
LPECVVDAIKQGDLIACGVLSGNRHFEGRLCDCVRANYLASPPLVVAYAIAGTVGIDFEN
EPLGVNSEGKKVFLKDVWPTKEEVQDIEEHKVIASIFTELRSRMQKESTFWNKLDAPDAV
LFPWDPKSTYIRCPPFFNKLSKDLCPPGSIENAHVLLFLGDKVTTDHISPAGSIARVSSA
AKYLQSKRLTPREFNSYGARRGNDAVMTRGTFASIKLLNLLVGKPGPKTVHVPSGQTLDV
FEAAERYQREGIPLIILAGKDYGSGNSRDWAAKGPYLLGVRAVIAESFERMHKNHLVGMG
IAPLQFLPGQSAKSLGLSGKERFSIPIPEQITPQQELTVQTSAGKSFSVVTLFENEMDVA
FYRHGGVLKYVARSTLK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaatcaggcgtgagacaggaggatattatacagatcatccgtttggtcatttg
atcgactctataccaaacgagaaaaatgaagtccggaaatattttaatccacagaagctt
ggagatcccaagtatgagcggctcccgtacgccgtccgcgtgctgctcgaggctgccatc
cggaggtgcgacggcttctacgtgaagcaggaggacgtgtacagcatcctgaactgggag
gagcgccagaacgaggtggagattccattccccccggcgcgagtgctgttgcaggacttc
acgggcattcccgctatggtggacctggccgccatgagagacgccgtcgccaagatcggc
gtcgaccccgacctcatcaaccccaaatgtcctactgaccttatagtagatcactcacta
cagattgacttcagcaagtgttccattcagaatgccccgaatcctgggggaggggatggg
ccggggccccgctcagttcctgggcgtccagctccacgggggcatcacgccagcagcagt
ggtcagtgtggaggacagagaggaggctgctccaagggctcctgctccgaccctccaacc
agagccaccgcagtacagatagagaacacaccacttctgtgccctttccacctaaagcct
gtgtctgagccggagacggctctgaaaaaccaggagctggagctcatacgcaataaagaa
agacttgagttctttaagtggtgttcaaaagcgtttcagaatgtcagcgtggtccctccg
gacattggctcggtccatcaggtgaatctggagtacctgtctcgcgtggtgcatgagagt
gaggggttcgtttaccctgacagcgttgtggggaccgattcacacactaccatgatcaat
ggtctcggcatactcggctggggagttggaggtatagagtccgaggcggtaatgctgggt
cagccggtctctttcacactgccacaggttgttggctgtaagctcattggctcagtcaac
tctctggccacatctatagacatcgtccttgggatcacaaagcatttacggcaggccgca
atcgctgggaggttcgtggaattttttggtccaggtgtgactcagctctctgctgcagac
cgaaccaccatagcgaacatgtgtcccgaatacagcgccacagtcagcttttttccagta
gacgacgtcacaatcaagcactttaaacagaccaactttacagaagagaaactagaattt
ttggagacttaccttaaatccatgaagctgtttcgagcctctgctgaccagtcagaagat
ccgcattatactgaggtgatcgaaataaacctgagttccatcgtcccgtacgtcagtgga
cccaaacgaccacaggaccgagtttcagtcacctgcatgaaggacgatttccttaactgc
ctcaatgaaaaggttggttttaaaggcttccacatcccgaaggaaaagcagaacaccgcg
gttccgtttctgcacgccggcaccgaatactcgctttctcacggttcggtcgtcatcgct
gccgtcatcagctgcaccaacaactgcaacccttcggtcatgctcactgcaggtctctta
gcaaagaaagcagtggaggctggtctttgtgtgaaaccatacatcaggaccagcctcgct
ccaggaagtggcatggttacacactacctcaatgccagtggagtgctgccttacctcagc
cagcttgggtttgaggtgatcggttatgggtgtgccacctgcgtaggaaacacggcacct
ttaccggaatgtgtagtagacgctatcaaacagggggatctgatcgcctgcggtgtgttg
tctgggaaccggcattttgaaggccgtctctgcgactgcgtccgagccaactacctagcc
tcaccccctctggtggtggcatacgccatcgcggggacggtcggaatcgatttcgagaac
gagccgctcggtgtgaacagtgaaggtaagaaggtgttcctgaaggacgtgtggccaact
aaagaagaggtgcaggacattgaggagcacaaggtcatcgcctcgatattcacagagctc
aggagcagaatgcagaaagagagcacgttttggaacaagttggacgctccggacgctgtg
ttgttcccgtgggatcccaagtccacgtatattcgctgtcctccgttcttcaacaaactc
tctaaagacctttgtcctcccgggtccatcgagaatgctcacgttcttctgttcctggga
gacaaagtcaccactgaccacatctctcctgcagggagcatcgctcgggtcagctctgcc
gccaagtacctacagagcaaacgcctgacccctcgcgaattcaactcgtacggcgcacgg
agagggaacgatgctgtgatgactagagggactttcgccagcatcaaactcctgaacctt
ctcgtcggcaaacccggccccaaaaccgtgcacgtgccttcgggacagacgctggacgtg
ttcgaggcggcggagcgctaccagagagaaggcattccgctcatcatcctggcagggaag
gattacggctcgggcaactctcgagactgggcagctaaaggaccttacctactgggggtg
cgagcggtgatcgccgagagtttcgaaaggatgcacaagaaccacctggtaggaatgggc
atcgctcctctgcagttcctccctggccagagtgctaaaagcctggggctcagtggaaaa
gagcgattctcgatccccatcccggagcagatcactcctcaacaggagctgaccgtgcag
accagcgctgggaagagcttcagtgtggtaactctcttcgagaacgagatggatgtggcc
ttctacagacacggaggggttctgaaatacgtggctcgcagtacgctgaagtaa
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