Silurus meridionalis (southern catfish): 124392337
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Entry
124392337 CDS
T08004
Symbol
lrrk2
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 2 isoform X1
KO
K08844
leucine-rich repeat kinase 2 [EC:
2.7.11.1
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124392337 (lrrk2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124392337 (lrrk2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124392337 (lrrk2)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124392337 (lrrk2)
Protein kinases [BR:
smeo01001
]
Serine/threonine kinases: TKL group
LRRK family
124392337 (lrrk2)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
124392337 (lrrk2)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124392337 (lrrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
COR
Roc
Ras
LRR_1
T2SSE
LRR_9
NACHT
AAA_22
AAA_16
Arm
Arf
PduV-EutP
nSTAND3
Viral_helicase1
G-alpha
Kdo
AAA_7
cobW
TsaE
FtsK_SpoIIIE
AAA_29
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
124392337
NCBI-ProteinID:
XP_046715185
LinkDB
All DBs
Position
10:complement(11993430..12019801)
Genome browser
AA seq
2552 aa
AA seq
DB search
MSDMVNKEDLEESLKKLLVRLKNNLEEVKQLSTIVQITQDLLFLAHTDECEELFKEKDVH
QPLTLLLSSCMNSTFQQVGWSLLCRLMEICPTTLDKLVHPLQAGKDWGGLGVHQQILNTL
TLHQKDLKVIMVGLRALALLLKSDEMTLLVLEEDVDVFGLVVEAMKAFPHSEELQLQGCS
ALCLLLKRVPEEHQVEFIEKKDHAVVLNVLSSFKDSENVVLSALQVLIPLTEPASNVEIL
MSKTEKCYSFMCQAVEAFPQSEAVQEVGCCLLHKCTLGGQKAVSGIITKESYFEDLVLNG
AHRVLMKACLSYPDNGKIQAAALSCFSALTKTILENKDLKKTCSEDEGDRGKEDGEDSND
KESLIWREVCCTALERHTDNADVQEAACWALNNLLLYGSIQNIYEEPKERPPLYIQVMTL
ILVPSSSFGVFQAAASTLGTLVRRHSKMRSRLLASGIHYNIVDLMRKHANSNEVCESACR
LLYTLFQGGTVSLDEGNMALGQILTAMRDHNFQSEVQLEGLRASLVLLNPDRSLREHGVS
VADPDTSDVSLKVLKNQCVIEEAHTVYLQALNRFISSEDIQECGLAVLSALADSSGAVDV
MCQQGAIDTVLHTLQMFPKKSKIHYWGLSLLFQLISKNKLSRMMEPVLVSVLVASVRQHQ
GSEEMRLKGFQVIWKLLDIYSGAAADLEKEGFEKDIFQQLRESTSAHRDGLKLSCLCLSK
MVMDSEIQYRMLERACEEGDVVMAECLIQLGTDVNKKTKTESLIYQVCENGGPLALVEVL
VSSGVHEQQLRGALSVCVKRRDGPLVILLLARLGLDHTSSALCLGGFRLGYLEAAWLNAL
LSEHRVPPTAKKRNSKGKWLAKQIKSMQKKRSPIGILVSQNTTEYFSDDESDESFYTSLD
DSVFSAFEDIESDGSDSPASGRMYCDSPDELRGLSKMRQQMRSRCAISEKSNGDPDLKDS
FKKRLSGRQGQIQRGLLFSESSSPRGSLANVDRDHIKLLDLSGNELISLSCLMDDTVQQQ
LEHLLRLNLNNNSLAEFPSGLCQSLKSLTRLDLQDNHLPSLPAELLSLPSLSMLNVSHND
LGPELCLDLRVCCPSLCQLNLSFNRITVFPYKLTQTMEKLEELSLEGNQISELSLPLCLP
EIKVFDVSKNKLTIISDDLLSACSKLETFNASINQLSCLLQLPSKIRTLKLSQNNFESVP
ETVINLPNLQSLDMRSNSIRVLPGPAAWTSANLRELIFSENQISVLDLKEPVYKWTHLEK
LHLSDNQLTELPPQIGLLEELTSLDVNGNCGLRSFPDEIGKLVRLWDLPLDRLQLQLDLK
HIGNKTKDIVRHFQHRLKKAVPYFRMKLIVVGNTGSGKTTLIQQLMKLKRSSWFFGTHSS
IFTVIDWHIRDRDRKKMVLNVWEVSGGEENSGSNSQFMSSRALYLVLYDLSKGAGELDTI
RDWLFNIKELAPVAPVIIVGTHLDICENGQVQECAFKIQEEILSQPLFLNIRERYMLCAC
EESDSIIRLRKAIAREASSFKIQGQPVMGQLVPDCYVELEKRILKERNHVPVEFPVLRHQ
RLLQLIKESQLLLEEGELAHAVRFLSETGVLLHFDDPALQLKDLYFIYPQWLCKTISQLL
TQKSLCKSSRGVMQRSTVETFLSESCCFPKDHLVHYFRLLEKFQIAMPLGDEQLLVYGSL
TDQKPMIEIPHCENSEIIVRVFEMPYFPMGFWSRLISRLLEVSSFMLQGRKNALRPNRIY
WKTGVYLNWSAEAYYLVEAFSDVNSSASFVRITVPCSRKGHVLLGQVVDHIDSVLEEWFP
GLLNTDVQGDGETLLKRWALYSFDDTEDWNKMLLQDLLKHTNKDGLLVSPENPHCTIPTS
QICPDLLLSDQPASIMLDPEELEMDLSKEYLLGNGGFGSVYRAVYKNEDVAVKIFNQHAS
ELYVHRLIRQELAVLGRLHHPSLVELLAAGSSPHLLVIELAPCGSLDSLFEHENCSLNRK
LQHRIALQVADGLRYLHSSMIIYRDLKPHNVLLFSLKTDSEMIAKLTDYGIAQYCCSMGV
KSSEGTPGFRAPEVARGNVIYNVQADVYSFGLLLYDLLTCGERISDGLKFPSEFDEIAVQ
GKLLDPVKHYRCSPWPGFQNLMKECLREDPGSRPTSAKVFDCLNSGKMLCLISELTLPGL
SCECFTATGSSRGLAGSVNSGAGAQIWIGGGSSSQKRGFVTGVDVETEKRSMQEIDKSPV
LCLVTVKVPGEVHDWLVAGTQSGSLVVMDTRNTTVLHCLQSAKDAVTSLYFHKPFQCSCL
KNYLLVGTANGMLIIYEDSVLKCADGAPVKLVQVGNANTPLMCLAPSGYYQDHTTLWAGC
GTRVLSLTVDYDISKSIDTRSTLHYQRRPSSSEACISRLVVDKYVYLSKNRGHSVEVWDK
KSGKMIDFIDCVQLLRKAKAVSADSSKEMESLWAHVKALLVQPNGTLWIGTGSGHILLVD
LATCQLLQVISTDCQSVRTMASVLIGTQGQKSRILMLGRRVHVSQEKIKSQSNKDAVLMI
WSSTLPQEIKDLNRHCELREQIAFKIQEEACD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacatggtgaacaaggaggatttggaagaaagcctgaaaaagctgcttgttcgg
ctgaagaacaatttagaggaggtaaagcagttgagcacaatagttcagatcacccaggat
cttctgttcctcgcgcacacagacgagtgcgaagagctttttaaagaaaaagatgtccat
cagccattgacgctcctgctgtcatcatgcatgaacagcacatttcagcaggtgggatgg
tccctgctgtgccggttgatggagatctgccccaccaccctggacaaactggtccacccg
ctgcaagctggaaaggactggggtggtttaggcgtgcaccaacagattctgaacacgctg
actttgcatcaaaaagacctaaaagtcataatggtagggctgcgagctctagccttgttg
ctgaagtcagatgaaatgacactgctggttctagaggaggatgtggatgtgtttgggctg
gtggtggaggctatgaaggcttttcctcacagcgaggagctccagctccagggctgctct
gctctctgcctcctgctgaagagagttcccgaggaacatcaggtggagtttattgagaag
aaggatcatgccgtggttctgaatgtgctcagtagctttaaagacagtgaaaatgtggtg
ttgtctgcactgcaggttcttataccactgactgagcctgcaagtaatgtagagattctg
atgtccaagactgaaaaatgctacagcttcatgtgtcaggcagtggaggcgttcccgcag
tcagaggctgtacaggaggtggggtgctgcctgctgcacaaatgtactttaggtgggcaa
aaggcagtctcaggaatcataacaaaagaaagctactttgaagatttggtgctgaatggt
gcgcacagagtgttaatgaaagcatgtctctcctaccctgacaatggcaagatccaggct
gctgcactctcctgtttctctgcactcacaaagacaattctggagaataaagacctcaag
aagacatgcagtgaggatgagggtgacagaggcaaagaagatggtgaagatagtaatgat
aaagaaagcctgatttggagagaggtttgctgcacggcattagagcgacacactgacaat
gctgatgtgcaggaggctgcttgctgggcattaaacaacttgctgctctatggcagtata
caaaatatatatgaggaaccaaaagaaaggcctcctttgtatatccaggtcatgactctg
atactggtgccctcctcaagttttggtgtgtttcaggcagctgcatcaacattaggcacc
ctcgtgcgcagacacagtaagatgaggtctcggcttctagccagtggcattcattacaac
attgtggatctgatgaggaaacatgccaactccaatgaagtgtgtgaaagtgcctgcagg
cttctatacacgctttttcagggaggaactgtgagtctagacgaagggaacatggctctg
ggtcagattttgaccgccatgagggatcataacttccagtctgaggtacagctggaaggg
ctgagagccagtctggtgctccttaacccagaccgcagtttgagggagcatggtgtatcc
gtagcagatccagacacatcagatgtgtctttgaaagttttaaaaaatcagtgtgtaata
gaggaagctcatactgtctaccttcaagccttaaacaggttcatcagcagtgaggatatt
caggagtgtgggcttgctgttttatctgctctggctgatagttctggagctgttgatgtt
atgtgccagcagggtgcgatagacacagtgctgcacacattacagatgtttcctaagaaa
agcaagattcactactggggtctgagccttctgtttcagctcatctcaaaaaacaagctg
tcacgtatgatggagcccgtgttggtgtcggttcttgtcgcctctgtgaggcagcatcag
ggcagtgaagaaatgaggctgaaaggttttcaggttatatggaaattattggacatctac
tctggagcagcagctgatctggagaaagaaggttttgagaaagacattttccaacagttg
agggaaagcacttctgcacatagagatggtctaaagctaagctgtctgtgtctgtcaaag
atggtgatggacagtgagatccaatatcgcatgctggagagggcatgtgaggagggtgac
gtcgtcatggccgagtgtcttatacagctgggaactgatgttaataaaaaaaccaagaca
gagtctctcatatatcaggtatgtgagaatggcgggccactggctctggtcgaggtgctg
gtcagtagtggtgtacatgagcagcagttgcgtggggctctgagtgtgtgtgtgaagagg
agagacggtcctctagtcatcctcctgttggcacgtcttggtctggaccacaccagcagc
gccctctgcttgggaggcttcaggcttggctatcttgaggctgcatggcttaatgcactt
ctctctgagcacagagttccccctactgcaaaaaagaggaacagtaaagggaaatggctg
gcaaaacaaataaagtccatgcagaagaagcggagtccaattggtattttggtgtcacag
aacactacagaatatttctctgatgatgagagtgatgagtctttttacacctctctggat
gacagtgtgttttcagcatttgaagacatcgaaagtgatggaagtgatagtcctgcttca
gggaggatgtactgtgattcaccagatgaattgagagggctctctaaaatgagacagcag
atgcgatctagatgtgccatttcagagaaaagcaatggtgaccccgatctcaaggattcc
tttaaaaagagactttcaggcaggcagggccagatccaaagaggactgctgttttctgag
agttcttctcctaggggatcactggcaaatgtggacagagatcatatcaaacttctggat
ctatcaggcaatgagctaatctctctctcatgcttgatggatgatactgtccaacaacag
ctagagcatttactacgcctgaatttgaacaacaacagcctagctgaatttcccagtggt
ctctgtcagagtttgaaaagtctgactaggttagatcttcaagacaaccatttgccatcc
cttcctgctgaactgttgagcctaccatcattaagcatgctgaatgtgtcacacaatgat
ctcggtcctgagctttgtttggacctacgtgtttgctgcccctcgctctgccagctgaac
ctttctttcaaccgcattactgtttttccatacaaactcacccaaaccatggaaaaactt
gaagaactctcactggaggggaatcaaatctcagaactctcccttccgctctgtcttcct
gaaatcaaggtgtttgatgtttcaaagaataaattaacaataatctctgatgatttattg
tctgcatgctccaagctggaaactttcaatgcctcaattaaccagcttagttgtttatta
caacttccttctaaaataagaaccctgaaattatcccagaacaactttgaaagtgttcct
gaaacagttatcaatcttccaaatttgcagtcactggacatgaggagtaacagtatcagg
gttctgccaggtccagctgcgtggactagtgctaatttaagagaattgatattcagcgaa
aaccagatctctgtgctggacctcaaagaacctgtatataagtggacccatctcgagaaa
ctgcatctgagtgataaccagctcactgagcttcctcctcagatcgggctgctggaagag
ttgacctctctggatgtcaatggtaactgtggtctgcgctcttttcctgatgagataggt
aagctagttcggctgtgggatttgcccttggacagactgcagcttcagctggacctcaaa
cacatcggtaacaagaccaaagacattgtcagacactttcagcatcgtttgaaaaaggct
gttccatatttccggatgaagttaatagtggtagggaatacaggcagtgggaagaccact
ctgatccagcagctgatgaaacttaagcgttcttcatggttctttggcactcattcttcg
atcttcactgtgatagactggcacatcagagaccgtgatagaaaaaaaatggtcttgaat
gtttgggaggtctcagggggagaggagaacagtggctctaattctcaattcatgagctct
agagcgctctacttggtgctgtatgacctgagtaaaggagctggtgaactggacactatc
agagattggctcttcaatatcaaagaacttgcccctgtcgctcctgtgattatagttggc
actcatttggacatatgtgaaaatggccaagtacaggaatgtgcttttaagattcaggag
gaaattttgtcccagccgcttttcctcaacattagggagcgctacatgctgtgtgcctgt
gaggagtcggactctatcatcagactgcggaaggccattgccagagaggccagtagcttt
aagatccagggacagccagtgatggggcagctggttccggattgttatgttgagctggag
aagagaattctgaaggagcggaatcatgtacctgttgagtttcctgtcctcagacaccaa
cgcctcctgcagctcattaaggagagccagctactgctggaggagggagaacttgctcat
gcagttcgcttcctcagtgagactggtgtgctgctgcactttgatgacccggcattgcaa
ctcaaagacttatattttatttatccccagtggctctgcaaaaccatctcacagcttctg
actcagaagagtctgtgcaagagctctagaggggtgatgcagcgctcaactgtggaaaca
tttcttagtgagagctgctgcttcccaaaagatcacctcgttcactacttcagactgttg
gagaagttccaaatcgccatgcccttgggcgacgagcagctcctggtgtacggcagcttg
actgatcaaaagccaatgattgagattcctcactgtgagaattcagagatcattgtaagg
gtctttgagatgccttattttcccatgggcttctggtccagattgatcagtcggctactg
gaggtttcctctttcatgctccagggtagaaagaacgctttgaggccaaatcgaatttac
tggaagacaggggtatacctgaactggtctgctgaggcatactacctagtggaagccttt
tcagatgtgaacagctctgcaagctttgttaggataactgtgccttgttcccgtaaaggt
catgtgttgttaggccaggtggttgatcatattgactctgtgctggaggaatggtttcct
ggcctcctcaacaccgatgtacaaggggacggagagacattgctaaagagatgggcatta
tacagctttgatgacacagaggactggaacaagatgctgctacaggaccttcttaaacac
actaataaagatggtctcttagtgagcccagagaaccctcactgtacaatccccacctcc
cagatctgccctgacttgctgctgagtgatcaaccagctagtatcatgttggacccagag
gagctagaaatggatctctccaaagagtacttgcttggaaatggaggttttggctcagtg
tacagagcagtatacaaaaatgaagatgtcgctgttaagatttttaaccaacatgcatct
gaactttatgtccatagattaataagacaggagttggctgtattaggcagactgcaccat
cccagtcttgtggaacttttggctgcaggaagctccccccatctgctggtgatagaactg
gcaccctgcggttctctcgactcattgtttgaacatgagaactgcagccttaatcgcaaa
ctgcagcacaggattgcactacaggtggctgatggtctcagatatttgcactcttctatg
ataatctaccgggacctgaaacctcacaatgtgttgttgttcagtcttaagactgactca
gagatgatagctaagctcacagattatggaatcgctcagtactgctgcagtatgggtgtc
aagagctctgaaggcactccaggcttcagagcaccagaggttgcccgtggtaatgtaatt
tataacgttcaagcagatgtgtattcatttggtctgctgctatatgaccttttgacctgt
ggagagagaatatcagatggtctaaagttccccagtgagtttgatgaaatagctgttcag
ggaaagctactcgacccagtgaaacactacagatgttcaccttggccaggctttcagaac
ctaatgaaggagtgtctgagagaggacccagggagcagacccacatctgcaaaggtgttt
gactgtctgaactcaggaaagatgttgtgtttgattagtgagctgaccctacctgggctc
tcctgtgagtgtttcactgccactggttccagcagaggtttggctggaagtgtaaatagt
ggcgctggagctcaaatatggattggtggtggaagtagcagccagaagcgtggctttgtc
acaggtgtggatgtagagacagagaaacgatctatgcaggagatagacaaaagccccgtc
ctctgcctggtgactgtcaaagtgcctggcgaggtccacgactggttagttgcaggaacg
cagagtggctctctggtggttatggacacaagaaacacaacagttttgcactgtttacag
agtgcaaaggatgcagtaacctcactgtactttcacaaaccttttcaatgcagctgctta
aagaactacctgttagtgggaacagcaaacggaatgcttattatctatgaagattcagtt
ctcaagtgtgctgatggtgctccagttaagcttgtgcaggttgggaatgcgaacacaccc
ctcatgtgtctggctccatctggctactatcaggatcacaccactctgtgggctggctgt
ggcaccagggtgctctctctaactgtggactatgacatctctaagagtatagacaccaga
tccacattgcattatcagcggcgtccttccagcagtgaggcatgtatctctcggctggtc
gttgacaagtatgtgtacctgagcaaaaatagaggacacagtgtggaggtgtgggataag
aagagtgggaagatgattgacttcattgactgtgtgcagttactcaggaaggccaaagca
gtgagtgctgacagttccaaagaaatggagtctttgtgggctcatgtgaaggctctgctg
gttcagcctaatggcactttatggataggaactggatctggacacatcctgctggtggat
ctcgctacatgtcagctactgcaggttatcagcactgactgccagtcagtgcgtactatg
gcctcagtgctgattggaacccaaggccaaaaaagtaggattctgatgttgggaagacgt
gttcacgtgtctcaagagaagatcaaatctcagtcaaacaaggatgctgtgttgatgata
tggagtagtaccctgcctcaggaaataaaagatctgaacaggcactgtgagttgcgagag
cagattgcattcaaaattcaagaagaggcctgtgattga
DBGET
integrated database retrieval system
