Silurus meridionalis (southern catfish): 124392348
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Entry
124392348 CDS
T08004
Symbol
trappc11
Name
(RefSeq) trafficking protein particle complex subunit 11
KO
K20308
trafficking protein particle complex subunit 11
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124392348 (trappc11)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
124392348 (trappc11)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
NTS_TR130
Motif
Other DBs
NCBI-GeneID:
124392348
NCBI-ProteinID:
XP_046715214
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Position
10:complement(19391430..19424676)
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AA seq
1133 aa
AA seq
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MSPTQWELPPELCCRPMAFVALTGLDVIYNAIHRAIWDAFCANRRADRVPISFKVLPGDH
EYPKCRTKRTSYEWYIPKGILKTGWMNKHLNLVPALVVLFYELDWDDPQWKEKQSECATK
VEIVRTSLQGRNTKVAVVLIQKKTPLPPGEDVVASERAAALCNACDLSAKSLFVLPHTDH
LVGYIIRLENAFYEHAQTYYYNEIRRVKSHKEFLNKTTHQLLFVRHQFKTGFFSELKQDT
QNALKYYKTAYSLIHELRAHETNMLEIKTLAGFINYKICRLCFQHNTPLDAIAQFRKHID
LCKKKIGSAELAFEHTAWMSKQFQSFGDLFDEAIKLGLTAIQTQNPGFYYQQAACYAQER
KQQAAQLCNHEPSVSFPTLDPSETNTGALDFYGQRQWRQGHQSIDPPDAEKEKQGIHSLQ
LKEKDVLHSELIIALLSNAVAQFKKYKCPRMKSHLMVQMGEEYYNAKDYTKALKLLDYVM
VDYRTERWWTLLTSILGTALKCSYLMGHIKDYITYSLELVGRASTLRDEQKSRIEKNLIR
VLMNEVPEPELECDPGSVKAAQVLWSDRVSLASNNEFTVEVQDYVPFIQCKAKFLSPSFH
VDEPVQLHVYLKADCPHPVRFAKLGVSLSNSEYNQFCLVDEESCKEKDILETSTQQNMCL
VPGKARKYCFKFVAKTEDVGRKIEITHVDLMLGSESGRCVYLNWRGGGGDAASTHEALQA
SRSFKRRTRVLEQQLDWDAISIQASTMIISRVPRISVQLRHDPPALTNEMYCMTVTIQSE
EDTVAKDVSLTAGLKPGQDANLTQMTYVTLNSSEVCDEAHPALLTDISIGELQPGQKIEK
KLYIRCVSTGSRIFLFHVSYAMSTTVEGKDITCRCHKDETVTIDTVVPFEVAFKFVSTKF
EHLERVCVDVPFLMMTDILSASPWPVHLVSSELQLASNMAAVDEPQSQVEGVVLQTGECA
SECFSLRCPPVQNGTSTIAAGHYLISWKRKSACSETPVVKTSMILPHVIVETIPLYVHAD
LPSFGRVRESLPVRYHIENRTGLVQDVDLSVEPSDAFMFSGLKQVRMRILPGTEQEMVYN
FYPLMAGYQNLPVLNVNLLRFPNISSQLLRRFLPTRIFIKPQGRNGDASIAAA
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgacacagtgggagctcccgcccgagctgtgctgcaggccaatggcctttgtg
gctctgacaggccttgacgtcatctacaacgccatccatcgtgccatctgggacgccttc
tgcgccaaccgacgggccgacagagtgcccatttcatttaaagtgcttccaggagaccac
gagtacccaaaatgcagaaccaagagaacctcttatgagtggtacatccctaagggtatc
ctgaagacaggctggatgaataagcacctaaaccttgtgcctgcactggtggtgctgttt
tacgagttggactgggacgaccctcagtggaaggagaagcagtccgagtgcgccaccaaa
gtggaaatcgtcaggacaagtctgcagggcagaaacactaaagttgctgttgttttaata
cagaagaaaactcctcttccacctggtgaggatgtggtggcgtcagagagagctgcggct
ctgtgtaatgcctgcgatctctcagcaaagtccctgtttgtcctccctcacaccgatcac
ctggtgggctacatcatcaggttggagaacgcgttttacgagcacgcgcagacctattac
tacaacgagattcggagagtgaagtctcacaaagagttcctcaataaaaccactcatcag
ctgctgtttgtgaggcaccagtttaaaactggcttcttcagcgagctcaaacaggacaca
cagaatgctctcaaatactataaaacagcatacagtctcatccacgagctccgagcccat
gagaccaacatgctggagatcaagactttggctgggttcatcaattataagatctgcagg
ctgtgttttcagcacaacaccccactggatgccatcgctcagttcaggaaacacattgac
ttgtgcaagaagaagatcgggagtgctgagctggccttcgaacataccgcctggatgtct
aagcagttccagtcatttggtgatctgtttgatgaggcgattaaactgggcctcacagcc
atccagacacagaaccctggtttctactaccagcaggctgcttgttacgcccaggaacgc
aagcagcaagccgcccaactctgtaaccatgagcccagtgttagtttccccacattggac
ccttcggagacaaacaccggagctctggatttttatggacagagacaatggagacaaggc
catcagagtattgatccacctgatgcagagaaagaaaaacagggcattcactctctccag
ctaaaggagaaggacgtactgcattcggagttgatcattgcattgctcagtaatgccgtt
gcccagtttaagaagtacaagtgtcctcgcatgaagagccatctgatggtccagatgggt
gaggagtattacaatgccaaggattacactaaagcattaaaactgctagactatgtgatg
gtcgactatcgtactgaacgctggtggactctgctcacctccatcttgggtacagcactg
aaatgctcatacctgatgggccacattaaagactacatcacctactcactggagctggtg
ggcagagcttctactctgcgtgacgaacaaaagtccaggattgagaagaacttgatcaga
gtgcttatgaacgaggttcctgagccggagctggagtgtgacccaggctctgtaaaggca
gctcaagtgctctggagtgatcgtgtctcactggccagcaataacgagttcaccgttgaa
gtgcaggactatgtgcccttcatccaatgcaaggccaagttcctgtctcccagttttcat
gtcgatgagcccgtgcagttacacgtgtacttaaaagccgactgtccccatcctgtccga
tttgccaaactgggcgtcagcctcagcaactcggagtataaccagttctgcctggtggat
gaagagtcatgcaaagaaaaggacattttagaaacatctacacagcagaacatgtgtctg
gttcctgggaaagcccggaagtactgcttcaaatttgtggccaagactgaggacgtcgga
agaaagatcgagatcacacatgtggacctgatgctgggcagcgagagcggtcgttgtgtg
tatctcaactggaggggaggaggcggtgacgccgcatctacccatgaggctctgcaggca
tcacgctcttttaagagaaggacccgtgtcctggagcagcagcttgactgggatgccatt
tccatccaagctagcaccatgatcatatcccgagttccccgaatctctgtacagctgcgt
cacgatcctccagccctgaccaatgagatgtactgcatgactgtcaccatccaatcagag
gaggacacagttgctaaggatgtcagtctcactgctggcctcaaacctggtcaggatgca
aatctcacacaaatgacctacgttacactgaatagctcagaggtgtgtgatgaagcacat
ccagctttactgactgatatttcaattggagagctgcagccagggcagaagattgaaaag
aagctgtatatccgctgtgtgagcactggatccagaatctttctttttcatgtctcttat
gcaatgagcaccacggtggagggtaaagacatcacatgcaggtgtcacaaggatgaaacc
gtgaccatagacacagttgttccattcgaggtggctttcaaatttgtgtccactaagttt
gaacacctggagcgagtgtgcgtggatgtgcccttcttgatgatgacggacattttgagc
gcatcgccgtggcctgtgcatttagttagcagtgagctacagctggcttccaacatggct
gctgtcgatgagccccagagccaggtggagggagtggtgctgcagaccggcgagtgcgca
agcgagtgcttcagtctcagatgtcctcctgttcagaacggtaccagcaccattgcagca
ggacattacctcatctcctggaagaggaaatctgcatgctccgagacaccagttgttaaa
acgagtatgatcctgcctcacgtcatcgtagagactattcctctgtatgtgcatgctgac
ctgccctcatttggccgtgttcgtgagtccctcccggtgcgttaccatattgagaatcga
accgggctggtgcaggacgtggatctgtccgtggagcccagcgatgcctttatgttctct
ggactcaagcaggtgcggatgaggattttgccaggcacagagcaggaaatggtgtacaat
ttctaccctctgatggccggttatcagaacctgcccgtgctcaacgtcaacctgttacgc
ttccccaacatctccagccagctgctgcgccgcttccttcccacccgcatcttcatcaag
cctcagggaagaaatggagatgcttcgattgcagctgcctga
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