Silurus meridionalis (southern catfish): 124392361
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Entry
124392361 CDS
T08004
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124392361
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Other basic domains
RF-X
124392361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
124392361
NCBI-ProteinID:
XP_046715267
LinkDB
All DBs
Position
10:complement(7225378..7248727)
Genome browser
AA seq
1735 aa
AA seq
DB search
MALFIICFKAREKKWGGNMENLKHEMPSRPQCACAAPPPGRSSSSTVRGGSRRAVVLQWN
SRLFLLFIYFSIFLIRISALSLTLCFRCFFSSLALYAFFGGGEQAKHPGHETLLPCKKSL
ISDETGPECAARIAGISLEVSDEAFMLKLVSPSPPSPPTLLPLTPPPPPPPPPPPSCNNL
IVMADDQQQQQQQPGPLQQGALSGPTCLPGALSGLQGAEATALQYDKIKNSICKSVQSKV
DSILQDVEKFTDIEKLYLYLKLPSGPSSGNDKRTENQRGSTSPATCDQNSMSSSRTQQMY
AFNWIRNHLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLG
MRGKSKYCYSGLRKKAFVHMPSLPNLDLHKTGDGCELLEPTGQSPSAEDEMRSAACGLVC
EWAQKVLSRQFDSVEDLARFLLNSHYIGTKSMAALTVMTGTPTGVKTPTPASAFVPTGDT
NSFQPQMKTLPSPSVDTKQQLQRKIQKKQQEQKLTSPLPGESQARRAEPGTPGPGCSITS
GSPALLSSQPAIGIVVAAVPSPITVQRNRQLMTSPSPVAATEGKVLPVNFQVVAQPVKQS
PKTPQNVPASPVGDRLARQRYAQILPKPSATSGITLRSPPTLLITNSPIKTVMPTSHVSS
VNVVKMTAISLTHNNSGGSNTPTPLRPASAGISSTVSQEESNQNLQAQNGSSVTLHSSGA
GRIGRLASTPVSICSISEIKVTSEAVNDSNSSAGAEKQSTALGNNIGQKNERATKYRASS
EPSLLVKASPVPERVTRAKSDSATPPSTIIGAAVPISNNSSDHQESTLYLTVMNQNADIR
SSDTASPTGQSPKDVGLGLKSPRKRSASVLESHAIPVKRVFISQQSLDASNSIRPSLVIA
TKRIQRPGTPARPESAPCKVTLKQNSLPTQILALSDIPIGHTSQTIVHSQSSSQMTHRAI
SAGISPNDIGSCNSTSSDQNLLQQIVSQQQVTIAISQEASAVNELKSSLQDYSQQIQAEQ
KQVNASHLSLISQPPEASAQLTLQQDIVDFDGAQATIDYFPFNDDDMTQDSIVEELVQME
EQMKLNSSLQPYLSSLDIPLQGQSAQSTILSSHQTGTQFYHSAHSSTTPVHTPTPTPTPT
PTPTPTPTSEILPGGHSLTRESPCCRVAPITPVEGILGGRHTPISTPLSNCSSSVPPSPV
ECRNPFAFTPINSNIPGYHDGSVVSSSPVKPMQRPMATHPDKAKLDWINNRYNSTSGSPS
VSNSNAIGILPSYQDMVEDPFRKPHAFAKPGQSFQSQSRHQDGHLGRLTTVSPVQQGQQA
VENKQESFAVPAPLENKVTACTSGNGGGNFRCRSVSPAVRQRNLSGTSVQTNLPPRSALS
PFNSPITSEVLSILSNSHSVVTANSMAQRSQSVPLSIMMQSEMLPIGQQGQQSNSAKITS
VLLSKMDADGDDTVRGLGVNNIPSKYTARMNLTQILETTQAFPEGTNHHGQQLSVCSSPS
QFDFQKPGFLISTGDESITFSSDDQAQSGSVLQQEQHLQLQDQQLELHDQQLLQDQQLQL
QEPPLQLQDQQLELQDQHLQLQHQRLQLQDQQQLQHDPDLSQQQLLSQTSQQDEEQQQQE
QLDFNSTVKDLLGEDGLNPSSQLVGQVASELSAVASDFSSEIRLTSDLSGSINDLNTLDP
NLLFDPSQQQDQYEDATLEELKNDPLFQQICSDTVNSAGFDWLENKDQPTVEMLG
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtttattatatgctttaaagcgagagaaaaaaaatgggggggaaacatggaa
aatctaaaacacgaaatgccctcccggccgcagtgcgcatgcgcagcccctccgcctggc
cgcagcagcagcagcaccgtccgtggcggcagccgccgtgctgttgtgctgcagtggaac
agtcgcctttttttattatttatttatttctctatatttttgattcgaatttccgctctc
tctcttactctttgtttccgttgttttttttcctcgttagctctttatgctttttttggg
gggggggaacaagccaagcatccgggtcatgagacgctccttccgtgcaagaaaagcctg
atttcggacgaaacgggcccggagtgtgctgctcggatcgcgggtatctcgctggaggtc
tccgatgaggccttcatgttaaagctggtatccccttctcctccttctcctccaacacta
ctacccctaacacctcctccaccaccaccacctcctcctcctccctcctgcaacaatcta
atcgtgatggccgatgatcaacaacagcagcagcagcagccgggtccgctgcagcagggt
gctctgtccggtccgacgtgtctccccggcgcgctgtccgggctgcagggcgccgaggcc
accgcgctgcaatacgacaagatcaagaactcgatctgcaaatctgtacaatcaaaagtg
gacagcattttgcaagatgttgagaagtttacagacattgaaaaactctacctctacctt
aagttgccttctggtcccagcagcggtaatgacaaaaggactgaaaatcagagggggtct
acgagtcctgcaacatgtgaccagaattccatgtcatcaagtcggacccaacagatgtac
gctttcaattggattcggaatcacttagaggagcatccagagacctcactgccaaaacaa
gaggtgtatgatgagtacaagagctattgtgacaatcttggctaccaccctctaagtgct
gctgattttgggaagatcatgaaaaatgtttttccaaatatgaaagcacgtcgccttgga
atgcgaggaaaatctaaatactgttatagtggactgaggaaaaaggcttttgtgcatatg
ccatctttgcccaacttggacttgcataaaacaggagatgggtgtgagctgttggagcca
accggtcagtcaccaagtgctgaagatgagatgcgttctgcagcctgtggtttagtgtgt
gaatgggcacaaaaagttctgagtcgccagtttgacagcgtggaggatttagcgcgtttt
cttctcaacagccactacattggcactaaatccatggctgcactaactgttatgactgga
accccaacaggcgttaaaacaccgaccccggcctctgcgtttgtgccaactggtgacacc
aactctttccagccccaaatgaagactctcccttcaccctctgttgacaccaaacagcag
ctacagcgaaagattcaaaagaaacagcaagaacagaaacttacttctccattgccaggt
gaatctcaggccagaagagctgaacctggcacaccaggccctgggtgtagtatcacatct
ggaagtccagctttgctgtcctcacagcctgcaataggcattgtggtggctgcagtacca
agtcctattacggtgcagaggaacagacaactgatgacttctccgagtccggtcgcggca
acagagggaaaagttttacctgtgaatttccaagttgtagcccagcctgttaagcagtct
cctaaaactccgcagaacgttccagcaagtcctgttggtgacaggctagccagacaaaga
tatgcccagattctccccaaaccctctgctacaagcggcataactcttcgttctccgcca
acactccttattactaacagccctataaaaacagtaatgcccacttcccacgtcagctca
gttaatgtcgtcaagatgaccgccatatcgttgacgcataacaatagtggtggtagcaac
actccaacaccattaagacctgcttcagctggtatcagtagcacagtttcccaggaagag
tccaatcaaaatctgcaagctcagaatggcagctcggttactctgcattcatctggagct
ggacgaattggccgccttgcctcaaccccagtttccatttgctccattagtgaaatcaag
gtaacatctgaagctgtgaatgatagtaactcatctgctggtgcagaaaagcagagcact
gcactagggaacaatattgggcagaagaacgagagggccactaaatatagggcttccagt
gaaccttctcttcttgtcaaggcatccccagtgcctgaaagagttactagagccaaaagt
gactctgcaacacctccaagtacaatcataggggcagctgtcccaattagcaataacagc
agtgatcatcaggagagtacgttgtatctgactgttatgaatcagaatgctgacattcga
tccagtgatacagcatccccaactggccagtcaccaaaagatgttggtcttggtttgaaa
agtcctcgaaagcgatctgcttctgttttggagtcgcatgctatcccagtaaagagggtg
tttatatcccagcagtctttggatgccagtaacagtattagacctagtcttgtaatagcc
acaaagaggatacaaaggccaggtactcctgcaagaccggagagtgctccatgtaaagtc
accctcaaacagaactctcttccgactcaaatcctggcactttctgacatccccattgga
cacacttctcagactatagtacactcccagagctcttcgcagatgacacacagagccatc
tctgctggaataagccctaatgatatcggttcttgtaatagcacatcgtctgatcaaaat
ttattgcaacaaattgtgagccagcaacaagttaccattgccatttctcaggaggcatct
gctgttaatgagctgaagagctcattacaagactactctcaacaaatacaggcagaacaa
aagcaggtaaatgctagtcacttgtcattaatttcccagcctcctgaagcttctgctcag
ttgactctccagcaggacattgttgactttgatggagctcaagccacaatagactatttc
cccttcaatgatgatgacatgacccaagatagtatagttgaagagttagtgcagatggag
gagcaaatgaagctgaatagcagtctacaaccttaccttagttctcttgacataccctta
caaggccagtcagctcaaagcaccatcctttcctctcaccagactggcactcagttctac
cactctgcacatagtagcaccactccagtgcatactcccacccccacaccaactccaaca
ccgactccgactccaacccctacgtctgaaattttgccggggggccacagcttgaccagg
gaaagtccttgctgtagagtggcacctattaccccagttgaaggcattttaggtggtcga
catacacctattagcactccactgtccaactgcagcagtagtgtcccaccaagtcctgtt
gaatgtcgtaatccttttgcatttactcctattaactccaacataccagggtaccatgat
ggcagtgtagtgtctagtagtccagtcaagcccatgcagagaccaatggccactcaccca
gacaaggccaagctagattggatcaataatagatataatagcacttcaggttccccatca
gtttcaaacagtaatgccattggaatccttccaagctatcaggacatggtggaggacccc
tttcgcaaaccacatgcatttgctaaaccagggcagtcttttcagtctcagtccaggcac
caggatgggcatttgggtcgattaactacggtgtctcccgttcaacaaggacagcaggca
gtggagaacaagcaagagagttttgctgtgcctgcaccattagaaaacaaagttacagct
tgtacatctgggaatggaggtggaaactttaggtgtcgcagtgtgagccccgctgttcgt
cagcgcaatctaagtggtacatctgtgcaaaccaaccttcctccaaggtctgctctttca
ccatttaattctcccataacttcagaggttcttagtattctttccaacagtcattcggtg
gtcactgccaacagcatggcccaaaggagccagtcagtaccactaagcatcatgatgcag
tctgagatgttgccgattggccaacagggacagcagagtaacagtgcaaagatcacaagt
gtgctcctcagcaaaatggatgcagatggggatgatacagtacgtgggctgggtgtcaat
aatattccctctaagtatacagcccggatgaacctgacacagatcttggagactacacag
gccttcccagaaggcacaaaccatcatggtcaacagctttctgtctgctcaagcccttca
cagtttgacttccagaagcctggtttccttataagcacgggagatgaatcaattactttt
tctagtgatgaccaagcacaatcaggctctgtgctacaacaagagcagcaccttcaacta
caggatcaacagttggaattacatgatcaacaactgttgcaagatcagcagttgcaactt
caggaaccaccattgcaactccaggaccaacagttagaattacaagaccaacatttacaa
ctgcaacaccaacgactgcagctacaagaccaacagcagctacaacatgatccagacctc
agccagcagcagttgctgtctcaaacctcacaacaagatgaggaacaacagcagcaggag
caactggactttaacagcactgtcaaggatcttttgggggaggatggcctcaatcccagc
tcacaactggttgggcaggtggcatcagaacttagtgcagtagcatcagacttttctagc
gaaatccgtttaacctctgacctttctggtagcatcaatgacctgaacactttggatccc
aatcttttgtttgatccaagtcagcaacaggaccaatatgaagacgccacactggaggag
ctgaagaacgacccgttgtttcagcagatatgcagtgacactgtgaattctgctggattt
gactggttggagaacaaagaccaaccaacagtggaaatgttgggttag
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integrated database retrieval system
