Silurus meridionalis (southern catfish): 124392375
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Entry
124392375 CDS
T08004
Symbol
cpeb1a
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 1a
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04114
Oocyte meiosis
smeo04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
124392375 (cpeb1a)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
124392375 (cpeb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124392375 (cpeb1a)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124392375 (cpeb1a)
Factors involved in mRNA localization
Trans-acting binding proteins
124392375 (cpeb1a)
mRNA cycle factors
P-body specific factors
124392375 (cpeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEBP1_N
RRM_7
CEBP_ZZ
RRM_1
ANCHR-like_BBOX
VWC
Motif
Other DBs
NCBI-GeneID:
124392375
NCBI-ProteinID:
XP_046715297
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All DBs
Position
10:1429762..1439564
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AA seq
505 aa
AA seq
DB search
MDASTGSTAEVPEAECSSVASRMPFCSQEGQESPLGLLSVAELSLGLQSLRLPCWEQPWN
SAEPEHPSRPCSPKNMLGLWPSPLSSALDTLQGCQSSLGGGDLLECFPSLTRMTESLSLL
NSGSSSPVDSETSGFSSGSDHLVSNLKTSVRISPPMKFQLFDTQKEALLPSIGQQEDFIS
SLAPTLPTVLEESLAKCWTRTAPWPSWSRQSARVHSFSIETKAQLHRQAAATNEATCTWA
GQLPARIYKNPIYSCKVFLGGVPWDVTEGSLLNTFSVFGSLKVEWPDKDGRHSQCPPQGY
VYLVFDSEKSVKALLQACSQRHLHHTDYLEYYYKISSKKIRCKVVQVIPWVITDSSFVCS
PSLQFFPRRTVFVGALHGMLTAEALAHIMKELFGEVVYAGLDTDKHKYPIGSGRVTFRNQ
KSYLKALTAAFVEIKTTKFTKKIQIDPYLDDSMCQICNCQPGPFFCRDQTCFQYYCRSCW
HWHHSTDMLSSHRPLMRNQKSLNLS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctcaacgggcagcacagcagaagtgccagaagcagaatgttcctctgtggcc
agcaggatgccgttctgcagtcaggagggtcaggagtctcctttgggcctgctaagtgtt
gctgagctcagtctgggcctgcagtctctcagactgccctgctgggaacagccctggaac
agcgctgagcctgaacatccatccaggccctgctctccaaaaaacatgctgggattgtgg
cctagtcctctcagcagtgctctggacacactgcagggttgccagagctctttgggtgga
ggtgatctgttggagtgttttcccagcctaacccgcatgacagagtctctttctttgcta
aactctggctctagcagtcctgtcgactctgagaccagcggcttctcgtctggatctgac
cacctggtcagtaatcttaagaccagtgtacggatctctcctcctatgaaattccagctg
tttgacacgcagaaagaggctctgttgccgagcatagggcagcaagaagacttcatttct
tctctcgctcccactctaccgactgtacttgaagagtcactggctaaatgctggaccagg
acagccccctggcccagctggagcagacagagtgcacgagtacattcgttcagcattgag
acgaaggctcagctgcatagacaagctgcagcaacaaatgaagctacttgtacctgggct
ggacagctgcctgcacgcatctacaaaaaccctatctactcctgtaaagtgttcctggga
ggagtgccctgggacgtcacagagggtagtcttttgaacacctttagtgtgttcggatct
ttaaaggtggagtggcctgataaggatgggagacactctcaatgtccacctcaaggttat
gtgtacctagtttttgattcggagaaatcagtaaaggctttgctccaagcctgcagccag
cgtcacctgcatcatacagattacctggagtactactataagatatctagcaagaagata
cgctgtaaggtggtgcaggtgatcccatgggtgatcacagatagcagttttgtgtgctca
ccctcgctgcagttcttccccaggagaacagtgtttgttggggctctgcacggcatgctg
acggccgaagctttggctcacattatgaaggaactgttcggggaagtcgtgtacgctggg
ctcgacacggacaagcacaaatatccaataggttctgggcgtgtgacattcaggaatcaa
aaaagctacctaaaagcattgactgctgcttttgtggaaatcaagaccactaaattcacc
aagaagattcagattgatccataccttgatgactctatgtgccaaatatgtaattgccaa
ccaggcccattcttctgtagagatcagacttgctttcagtactactgccgctcctgttgg
cactggcatcactcaacagacatgctgagcagtcaccggcctctgatgcgcaaccagaag
agccttaacctgagctaa
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