KEGG   Silurus meridionalis (southern catfish): 124392389
Entry
124392389         CDS       T08004                                 
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
  KO
K12327  caldesmon
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    124392389 (lsp1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:smeo04812]
    124392389 (lsp1a)
Cytoskeleton proteins [BR:smeo04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     124392389 (lsp1a)
SSDB
Motif
Pfam: Caldesmon
Other DBs
NCBI-GeneID: 124392389
NCBI-ProteinID: XP_046715325
LinkDB
Position
10:14150431..14172338
AA seq 589 aa
MSSAILRRNSSKQGLQNLLRVTAQRSIEDAEEIERERRRRAREALRKDHSITGSAGAPQE
TSGPTEECLLESELKPSSSGALEEDEGFSDWTQRLERGRQVRQDENDRKEENLKVKRTMN
GGGRKGEMSSNVLKRQHNLQAEVEEVLDYMPGRKTSEKCVLFGDKTSSLTAKETPEWKED
IIRVNKRQVEETKPHMEEKVKEVRKEVKVSYTSKVFLQQDRTPTTNNDDPDEEEVTSHLK
TRKTTSRVIDHGSEMREQAGASLETEQKLEKIRRSHQEKESQELEQLRQRQAEAEVELEN
LKKRREERRRLREEEERRKEEEEQQRLVKEEEEKRQMKEDIERRRMEAAEKRMRSLNMSS
PDLDESFNSLCPKSPTFKREHEERLTAESTCLIIDRTESLNRSLKKSNSFKKTQPPILLT
KIDDKLEQYTHAVESSAKEPKGPKSAVADMPSVPEPVVAKKNLFEAGEAWNQGTHKGTPS
KDTDGLKVGVADLITQWVKGSPEGGNRYAQPKPCDVKAGDVLQKKNMWEIIGEGSQTCRS
GQAGKCTSSSKRYKFVVTGHGKYEKIPIDDDDYSDYPSEKSRDVCHNDF
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgtcaagtgcaatcttgagacgaaactccagcaagcaaggcttgcagaacctcctcaga
gtgacagctcagcgaagcattgaagatgctgaagaaattgagagggagcgacgacgccgg
gcccgagaggctctcagaaaggatcacagtatcactggatctgctggtgctcctcaagaa
acctctggaccaactgaggagtgtctcttggaaagtgaactgaaaccaagcagctctggt
gcactggaagaggatgaaggtttcagtgactggacacagagattggaaaggggcagacag
gtcaggcaggatgaaaatgaccgtaaagaggagaacttgaaggtgaaaagaaccatgaat
ggaggaggcagaaagggagagatgagctccaatgtgttaaaacgacagcataatttacaa
gctgaagtagaagaagtgttggactacatgccagggaggaagaccagtgagaagtgcgtg
ttgtttggagacaagacaagtagccttacagccaaagagacaccagaatggaaggaagat
ataatcagagttaacaagagacaagtcgaggagacaaaaccacacatggaggagaaggta
aaagaagtgagaaaagaggtgaaggtctcttatacatctaaagttttcttacagcaagat
agaacacccaccaccaacaatgacgatcctgatgaagaggaagtgacatcacatctcaaa
actagaaagactacaagcagggtcatagatcatggctcagagatgagggaacaggcaggg
gccagtctggagaccgagcaaaagttggagaagatccggcggagccaccaggaaaaggaa
agccaggagctggagcagcttcgccaacggcaggctgaggctgaggtagagttggagaac
cttaagaagcggagagaagaacgcagaagattgcgtgaggaagaggagcgcaggaaagaa
gaagaggagcagcagcgtctggttaaggaggaggaggagaagagacagatgaaggaggat
atagaaaggagaaggatggaggcagctgaaaagaggatgaggagcttgaatatgtcttcc
ccagatttagatgagtctttcaactctctctgtccaaaaagtcccactttcaagagagag
catgaggagagattgacagctgaaagtacatgcttgatcattgacagaacagagtccttg
aatcggtccttgaagaaaagcaacagctttaagaagactcagccaccgatactcttgact
aagattgatgacaaactggagcagtatactcatgctgtggagagctcggcaaaagaacca
aagggccccaagtcagctgtagcggacatgcccagtgttcctgaaccagtagttgcaaaa
aagaacctgtttgaggcaggagaggcctggaaccagggcacccacaaaggaaccccatca
aaggacactgatggactgaaagtgggtgtggctgatctgatcactcagtgggtaaaagga
agcccagagggtggcaacagatatgcacagcccaaaccatgtgatgttaaagcaggagat
gtgcttcagaagaagaacatgtgggagatcataggggaaggttcacaaacctgccggtca
ggacaagcggggaagtgcacctcttccagcaaacgctacaagtttgttgtgaccggccat
ggcaaatatgagaagattcccattgatgatgacgattacagtgattatcccagtgaaaaa
tcaagagatgtgtgccacaatgacttttaa

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