Silurus meridionalis (southern catfish): 124392389
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Entry
124392389 CDS
T08004
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
124392389 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124392389 (lsp1a)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
124392389 (lsp1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
124392389
NCBI-ProteinID:
XP_046715325
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Position
10:14150431..14172338
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AA seq
589 aa
AA seq
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MSSAILRRNSSKQGLQNLLRVTAQRSIEDAEEIERERRRRAREALRKDHSITGSAGAPQE
TSGPTEECLLESELKPSSSGALEEDEGFSDWTQRLERGRQVRQDENDRKEENLKVKRTMN
GGGRKGEMSSNVLKRQHNLQAEVEEVLDYMPGRKTSEKCVLFGDKTSSLTAKETPEWKED
IIRVNKRQVEETKPHMEEKVKEVRKEVKVSYTSKVFLQQDRTPTTNNDDPDEEEVTSHLK
TRKTTSRVIDHGSEMREQAGASLETEQKLEKIRRSHQEKESQELEQLRQRQAEAEVELEN
LKKRREERRRLREEEERRKEEEEQQRLVKEEEEKRQMKEDIERRRMEAAEKRMRSLNMSS
PDLDESFNSLCPKSPTFKREHEERLTAESTCLIIDRTESLNRSLKKSNSFKKTQPPILLT
KIDDKLEQYTHAVESSAKEPKGPKSAVADMPSVPEPVVAKKNLFEAGEAWNQGTHKGTPS
KDTDGLKVGVADLITQWVKGSPEGGNRYAQPKPCDVKAGDVLQKKNMWEIIGEGSQTCRS
GQAGKCTSSSKRYKFVVTGHGKYEKIPIDDDDYSDYPSEKSRDVCHNDF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgcaatcttgagacgaaactccagcaagcaaggcttgcagaacctcctcaga
gtgacagctcagcgaagcattgaagatgctgaagaaattgagagggagcgacgacgccgg
gcccgagaggctctcagaaaggatcacagtatcactggatctgctggtgctcctcaagaa
acctctggaccaactgaggagtgtctcttggaaagtgaactgaaaccaagcagctctggt
gcactggaagaggatgaaggtttcagtgactggacacagagattggaaaggggcagacag
gtcaggcaggatgaaaatgaccgtaaagaggagaacttgaaggtgaaaagaaccatgaat
ggaggaggcagaaagggagagatgagctccaatgtgttaaaacgacagcataatttacaa
gctgaagtagaagaagtgttggactacatgccagggaggaagaccagtgagaagtgcgtg
ttgtttggagacaagacaagtagccttacagccaaagagacaccagaatggaaggaagat
ataatcagagttaacaagagacaagtcgaggagacaaaaccacacatggaggagaaggta
aaagaagtgagaaaagaggtgaaggtctcttatacatctaaagttttcttacagcaagat
agaacacccaccaccaacaatgacgatcctgatgaagaggaagtgacatcacatctcaaa
actagaaagactacaagcagggtcatagatcatggctcagagatgagggaacaggcaggg
gccagtctggagaccgagcaaaagttggagaagatccggcggagccaccaggaaaaggaa
agccaggagctggagcagcttcgccaacggcaggctgaggctgaggtagagttggagaac
cttaagaagcggagagaagaacgcagaagattgcgtgaggaagaggagcgcaggaaagaa
gaagaggagcagcagcgtctggttaaggaggaggaggagaagagacagatgaaggaggat
atagaaaggagaaggatggaggcagctgaaaagaggatgaggagcttgaatatgtcttcc
ccagatttagatgagtctttcaactctctctgtccaaaaagtcccactttcaagagagag
catgaggagagattgacagctgaaagtacatgcttgatcattgacagaacagagtccttg
aatcggtccttgaagaaaagcaacagctttaagaagactcagccaccgatactcttgact
aagattgatgacaaactggagcagtatactcatgctgtggagagctcggcaaaagaacca
aagggccccaagtcagctgtagcggacatgcccagtgttcctgaaccagtagttgcaaaa
aagaacctgtttgaggcaggagaggcctggaaccagggcacccacaaaggaaccccatca
aaggacactgatggactgaaagtgggtgtggctgatctgatcactcagtgggtaaaagga
agcccagagggtggcaacagatatgcacagcccaaaccatgtgatgttaaagcaggagat
gtgcttcagaagaagaacatgtgggagatcataggggaaggttcacaaacctgccggtca
ggacaagcggggaagtgcacctcttccagcaaacgctacaagtttgttgtgaccggccat
ggcaaatatgagaagattcccattgatgatgacgattacagtgattatcccagtgaaaaa
tcaagagatgtgtgccacaatgacttttaa
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