Silurus meridionalis (southern catfish): 124392391
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Entry
124392391 CDS
T08004
Symbol
man2c1
Name
(RefSeq) alpha-mannosidase 2C1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
124392391 (man2c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124392391 (man2c1)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
124392391 (man2c1)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
124392391 (man2c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Ams1-like_1st
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Phage_TAC_1
DUF237
Motif
Other DBs
NCBI-GeneID:
124392391
NCBI-ProteinID:
XP_046715332
LinkDB
All DBs
Position
10:11607963..11616269
Genome browser
AA seq
1027 aa
AA seq
DB search
MFHRPVFKNRRTLLERAEKFISDVYFTDCNLRGRLYGETCALESLSVFQTEKRVPYSEAV
QQKFQPCKVGDAFGPTWWTCWFKLVLKIPDEWKGKEVHLRWESDGEGMVWRDQEPVQGLT
KEGEKTSYILTECLKQNEPHSMTLFVELACNGLFGAGMGSMIAAPDLKRKYTVHKAELVV
FNKDVQELLIDFEMLVDIVKVLGEEDQRGYQALFTANEMVNLCDPANPSSFAAARNLAQT
FFNQKNGQSQHIVHAMGHCHIDTAWLWPYEETIRKCARSWVTAVRLMEKNPEFIFTCSQA
QQFQWVKNWYPGLYSKIQHFVQKGQFIPVGGTWVEMDGNLPSGESMVRQFLEGQSFFKVE
FGQYCKEFWLPDTFGYSAQLPQIMQGCGISRFLTQKLSWNLVNTFPHNTFFWEGIDGSQV
LTHFPPGNSYEMKGKVEDLINTIRKNKDKGRANHSMVLFGFGDGGGGPTQVMLDRLQRVQ
DSDGLPRVQMSSPDRLFSELQADSGLLCTWSGELFLELHNGTYTTQAKIKLGNRQCETLL
HDIEVASCLALCKSPVFLYPAEELQKAWRLLLLNQFHDVIPGSCIEMVVEDAVNYYKEIQ
ENGSRLLLSACDVLRSSLQSGTDFRIAVLNTLSWERTEVIELPEEGTQRKLVLVKAPSIG
VAPVSESADSVSIVTVTEQPDGTVRMENGILKAVLDKMGRLLSLLHVQSNREAISSGCFG
NQFVVFDDVPLYWDAWDVMDYHLQTRKPVEDVVHPTKVLSSGGLRGSVTFSLCINGKSTI
TQQVILDAKCPYMKFSTQVDWAEAHKFLKVEFPVQVRSCNATYEIQFGHLQRPTHRNTSW
DWARFEVWGQKWADLSEHGFGVALLNDCKYGYSVHKNIMTLSLLRAPKAPDANADMGHHQ
FTYAIMPHKGSFQDASVIQHAYNLNFPLHLIHDVNLVKPWSAFSINSRAVILEIIKQAEG
RKNVFVVRLYESHGSTVAAVLSTTLPVREAWHCDLLERPGSTVAVTDNEISLTFKPFQII
SLLLQLC
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaccggccggtgtttaaaaacagacggactctcctggagcgagcagagaagttt
atatctgatgtgtatttcaccgactgcaatctcagaggaagactttatggagaaacctgt
gcgcttgagtctctctcagtgtttcagactgaaaaacgtgtcccatattcagaggcagtt
cagcaaaagtttcagccatgcaaagttggtgatgcatttggacccacgtggtggacctgc
tggttcaaacttgtcctaaaaattccagatgagtggaaaggtaaggaggttcatttgaga
tgggagagtgatggagagggaatggtatggcgagaccaggaaccagtccagggtttgacc
aaagaaggggaaaagacgagttacatcctgactgagtgtctgaaacagaatgaaccccac
agcatgactctgtttgtggaattagcttgtaatggattgttcggggctggaatgggttcc
atgatagctgccccagacttgaaaaggaagtacactgttcataaggctgagcttgttgtt
tttaataaagatgtgcaggagcttctcattgactttgagatgcttgtggatattgttaag
gtgcttggtgaagaagaccaacgaggatatcaagctttatttacagcaaatgagatggta
aatctgtgtgaccctgccaatcctagctcttttgctgcagcccgtaacctggcccagact
ttcttcaaccagaaaaatggacaaagccaacacattgtgcatgccatgggccactgtcac
attgacacagcctggctgtggccatatgaagagaccatcagaaaatgtgcacgcagctgg
gttacagcagtccgcttgatggagaagaacccagagtttatctttacttgctcgcaggcc
cagcagtttcagtgggtaaagaactggtatccaggtctatactccaagatccagcacttt
gtgcagaaaggacagtttattccagttggaggcacatgggtggagatggatggcaacttg
ccttctggagagtctatggtcaggcagtttttagaaggacagagcttctttaaagtggaa
tttggacagtactgcaaagagttctggttacctgatacatttggctactctgcgcagctc
cctcagataatgcaaggatgtggtatctcccgctttctcactcagaagttgagttggaat
cttgtcaacacatttccacacaacacattcttttgggagggcattgatggatcccaagtg
ttgactcatttcccacctggcaattcctatgagatgaagggtaaagttgaagacctaatc
aacaccatcaggaaaaacaaagacaaagggcgggccaatcacagcatggtgctatttggt
tttggtgatggaggtggaggacctacccaggtcatgctagaccgcttgcagcgtgtacag
gattcggacggcctacccagggttcaaatgtccagtccagatcgtctgttctctgaactt
caggctgactctggcctcctgtgtacctggtcaggtgagctctttcttgagctacacaat
ggcacatacactactcaggcaaagataaagctggggaatcgtcagtgtgaaacactactg
catgatattgaggtggccagctgcctggcactgtgtaaaagccctgtttttttataccca
gcagaagagctccaaaaagcgtggaggcttctgctgctcaatcagtttcatgatgtcatt
cctggcagttgcattgagatggtggtagaagatgcagtaaattattataaggaaatccaa
gagaatggctccagactcttgctttctgcctgtgatgtgctaagatctagtctccagtct
ggaacagacttccggatagcggttctcaacacactctcttgggagcgcactgaagtcata
gaactgccagaagagggcactcagagaaagctagtcttggtgaaagcccccagtattgga
gtagctccagtctcagagtctgctgatagtgtgtctatagtgactgtaacagaacagcct
gatggtacagtcagaatggagaatggcattttgaaggctgtattggacaaaatgggccgt
ttgttgtccctgcttcatgtacagtcaaacagggaagccatttccagtggttgttttgga
aatcagttcgtggtgtttgatgatgttcctctttactgggatgcatgggatgtaatggac
taccatcttcaaaccaggaagcctgtagaggatgttgtacaccctactaaagtgctgagc
tctggagggctgcgaggaagcgtgaccttctccctgtgcatcaatggaaagagcactatc
acacagcaagtcatattggatgccaaatgtccctacatgaagttcagtacacaggtggat
tgggcagaggcacataagttcctcaaggtggagtttcctgtacaggttcgcagttgcaat
gccacctacgagattcagtttggtcacctgcagagacctacacacagaaacacatcctgg
gactgggctcggtttgaggtatggggccaaaaatgggctgatctctcagagcatggcttt
ggcgtggctcttctgaatgactgcaaatatggctactctgttcacaagaatatcatgaca
ttatcattactgcgagcaccgaaagcgcctgatgccaatgcagatatgggacatcatcag
tttacatatgcaatcatgccacacaaaggctcttttcaggatgcatcagtcatccaacat
gcctacaatcttaacttcccactgcatttaattcatgacgtcaatttagtcaaaccttgg
agtgcattcagcataaactcaagagcagtcatcctggaaattatcaaacaggctgaggga
aggaaaaacgtttttgttgtccgcctgtacgagtcccatggaagcaccgtggctgcagtt
ctctcgaccacccttccagtgcgagaggcttggcattgtgacttgctggagcgccctggt
agcactgttgcagtcactgacaatgagatatctctcacctttaaaccgtttcagatcatc
tcactcctgctgcagctatgctga
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