Silurus meridionalis (southern catfish): 124392392
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Entry
124392392 CDS
T08004
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124392392 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124392392 (neil1)
Enzymes [BR:
smeo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
124392392 (neil1)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124392392 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
FAO_M
Motif
Other DBs
NCBI-GeneID:
124392392
NCBI-ProteinID:
XP_046715333
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Position
10:complement(11616350..11621488)
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AA seq
416 aa
AA seq
DB search
MPEGPELHLASVFVNTACAGVIFTGAVEKSEVSKQAQVPFTSDAYQISATSRGKEVRLSL
TPIKVESRKGKSAPDQAPMDVVFRFGMSGRFCFTAKSELPKHAHLRFYTKENPQRVLSFV
DPRRFGSWRANESWHKERGPCVISEYQSFREKVLSNLADKAFDKPVCEALLNQKYFNGIG
NYLRAEILYRLKIPPFVKARNVLEGLKPQHEDPMNIKEEPSKVVAEEAVVDKKKIEHPDL
ISLCHTVPLEVVNLGGNGYDPQKGDYTKLISWLQCYSTDGMNSLTDHNGRTVWFDGDPGP
MAPKASRFSRAKRTIKKDVYTDTKKEKLVKKEPGAGKIGQDVPKKQSGTRRKNASTPGLK
AEAAEDSKRPKADQRKSSSKGVQQPKNKKAKRPSIRKANTKAKATSKPRRKSSRNA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggtcctgagctgcacctggccagtgtgtttgtgaacacagcatgtgcaggt
gtgatcttcaccggcgctgtggagaagtcagaggtgagcaaacaagcccaggtgccgttc
accagcgatgcgtatcaaatcagcgccacgtccagaggaaaagaagtgcgactctctctc
actcctatcaaggttgagtcacggaaaggcaaatcagcaccggaccaggcgcctatggat
gtcgtcttccgctttgggatgtcaggcagattctgcttcacggcgaaatcagagctccca
aaacatgcccacctgcgattttacaccaaagagaatcctcagagagtgttgagcttcgtt
gatccccgcaggtttggcagctggcgggcgaatgaaagctggcataaagagcgaggccca
tgcgtgatatctgagtaccagagcttcagggagaaggttttgtccaatttggcagacaag
gcattcgacaagccagtctgcgaggctctcttaaatcagaaatacttcaacgggattggc
aactacctccgagcagagattctgtacagattaaagattcctccctttgtgaaggcaagg
aatgtgttggagggactcaaaccacaacatgaagatcccatgaacattaaagaggagcca
agcaaagtcgtggcagaggaagctgttgtggataagaagaaaattgagcacccagacctc
atctctctgtgtcatactgttccacttgaagtggttaatttgggtggaaacggttatgac
ccacagaaaggagattacacaaaattaatttcctggctacagtgttattccactgatggg
atgaattcattaacagaccacaatggaagaactgtttggtttgatggtgaccctggtcca
atggcccctaaagcctccaggttttccagggcaaagagaacaataaagaaagatgtctat
acagatacaaagaaggaaaaacttgtaaaaaaggaaccaggggctggaaaaattgggcag
gatgtgcctaagaaacagagtggcaccagacgaaagaatgccagcacacctggattaaaa
gcagaagcagctgaggacagcaaaagaccaaaagcagaccaaagaaaaagcagttcaaaa
ggtgtacagcaacctaaaaataagaaagcaaaaagaccaagtatacggaaagccaacact
aaggcaaaggctaccagcaaacctcgtagaaagagcagtaggaatgcctaa
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