Silurus meridionalis (southern catfish): 124392429
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Entry
124392429 CDS
T08004
Symbol
cpeb4a
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4 isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04114
Oocyte meiosis
smeo04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
124392429 (cpeb4a)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
124392429 (cpeb4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124392429 (cpeb4a)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124392429 (cpeb4a)
Factors involved in mRNA localization
Trans-acting binding proteins
124392429 (cpeb4a)
mRNA cycle factors
P-body specific factors
124392429 (cpeb4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
124392429
NCBI-ProteinID:
XP_046715426
LinkDB
All DBs
Position
10:complement(18919191..18934804)
Genome browser
AA seq
734 aa
AA seq
DB search
MGDYSFGVLVKNNASNKAVFPVRIHPHLQHPIHQPSSPPAFINSNSQSGGNAGSAWLFPS
VTSHANTQDEILESDKAKVQQQQHQEDLEGQEKRPHTPQSHQETVSIMSELENAMPEEGH
LDKVAVENGNGKEGLRIESPVLSGFDYQEPAGIGTLAQSSSSSLPGFSSWSTAIPANPSA
MMEEVGFFSQNATTANTAPPLLFQNFSHHSSPGFGGSFSHQIGPLSQHHPPPPPPPPPHF
QHPHNQHQQNRRSPASPHPPPFNHRNAAFSQLSHLGNNLNKPPSPWGNYQSQSSTLSSSS
WSPGGGYGGWGGSQGREYRRGLNGGMTAINSISPLKKSFPNSQASSQKYSRNSSSFNTKP
WMEDSLNRNDSFFPFQERSRSFDGFSMHSLENSLIDIMRAEQDSLKGRFGFSHPPEEGSL
SGNARNYGRRRGPSSLFPMEDERSFGDDERNEQSLGGLGSPHCFPHQNGERIERYSRKVF
VGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDAC
MEEEGKLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVE
LAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRV
EVKPYVLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVK
EGGDRPRHISFRWN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggggattacagttttggagtcctggtaaaaaacaacgcgtcaaacaaagctgtgttc
ccggttagaatccacccgcacctgcaacatccgatccaccagccttcaagtccacctgct
ttcataaacagtaatagtcagagtggtggaaatgcaggctctgcttggcttttcccttct
gtaacatcccatgctaacacacaagatgagatcctggagtctgacaaagccaaggtccaa
cagcagcaacaccaagaagacctagaaggacaggaaaaacgacctcatactcctcagagc
caccaagaaacggtgagcatcatgtctgagctggaaaatgccatgcctgaggaaggtcat
ctggacaaggtggctgtggaaaatggcaatggaaaagagggcctgcgaattgaatctcct
gtgttatcagggtttgactaccaagaaccagctggcattgggacacttgcgcagtccagc
agctcctctttgcccggcttcagcagctggtccaccgctattcccgcaaacccgtctgcc
atgatggaagaggtgggtttctttagtcaaaatgccactactgctaatactgcacctcca
ttgctgtttcaaaacttctctcatcattcaagtcctgggttcgggggcagtttttcccac
cagatcggaccactgtcccagcaccatcctcctcctcctcctcctcctcctccgcacttc
cagcacccccacaatcagcaccagcagaatcgcaggtccccagccagcccacaccctcct
cccttcaaccaccgcaacgctgcgttcagccagctgtctcatttgggaaataacttaaac
aaaccaccttcaccatggggaaattatcagagccaatcctccaccctttcttccagctca
tggagtccgggtggagggtatggaggatggggaggctctcagggccgagaatacagacga
ggcctgaatggaggcatgactgcaattaactccatttcaccactgaagaaatccttccca
aacagccaggcgtcttcacagaagtattcccgcaacagctcaagcttcaacactaagcca
tggatggaggacagcttaaaccgcaatgacagcttctttccgtttcaggagcgcagtcgg
tcctttgatggcttcagcatgcactctctggagaactcactgattgacattatgagagct
gagcaggattctttgaaaggtcgctttggcttttcccatccacctgaggaaggctctctc
tctgggaatgcaaggaattatggacgacgacgaggtccctcatccctgttccccatggag
gatgagcgcagtttcggggatgatgaaaggaatgagcagagccttggtggtctaggttcc
ccacactgctttcctcatcagaacggcgagcgtatcgagcgctactctcgcaaagtgttt
gtcggtggactacctcctgatatagatgaagatgaaatcactgctagtttccgtcggttt
ggacacttgtttgtggattggcctcacaaagcagaaagcaagtcctattttccacccaaa
ggttatgcatttctgctgtttcaagaggagagctcagtccaggctctaatagatgcctgc
atggaggaggagggaaagctctacctgtgtgtgtcaagccccaccatcaaagataagcct
gtacaaatccgtccatggaatctaaatgacagtgattttgtgatggatggctctcagcct
ctggaccccagaaaaaccatctttgttggaggagtgccacgacctcttcgagcagtggag
cttgcaatgatcatggacaggctttatggaggggtgtgttatgctggcattgacaccgac
cctgagctgaaatatcctaagggagcgggacgcgtggccttctccaaccagcagagctac
atcgctgctatcagcgctcgatttgtgcagctgcagcatggagaaattgataaacgggtg
gaagtgaagccatatgtcctagatgaccagctgtgtgatgagtgccagggcacacgctgt
gggggcaagtttgcacccttcttctgtgccaatgtcacctgtctgcagtactactgtgaa
tactgctgggcagccatacattcgcgtgcggggcgagagttccataagcccctggtgaag
gagggaggagaccggcctcgccatatctccttccgctggaactga
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