Silurus meridionalis (southern catfish): 124392461
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Entry
124392461 CDS
T08004
Symbol
ptprz1a
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124392461 (ptprz1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124392461 (ptprz1a)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smeo00535
]
124392461 (ptprz1a)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
124392461 (ptprz1a)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
124392461 (ptprz1a)
Proteoglycans [BR:
smeo00535
]
Cell surface proteoglycans
Others
124392461 (ptprz1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
Tc-R-P
PTP-SAK
DSPc
PTPlike_phytase
GUN4_N
Y_phosphatase3
FN3_DSCAM-DSCAML_C
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
124392461
NCBI-ProteinID:
XP_046715486
LinkDB
All DBs
Position
10:9536840..9583719
Genome browser
AA seq
1806 aa
AA seq
DB search
METPESKCLLSLLLLVICQLVDVAQPYGFRSQKKLAENIDWSYAGTLNQNKWHKKYPSCN
NAKQSPINIEESLVQVKAQFQKLRLEGWDQQTSESTTVKNDGKTVTIDVGGEFSVSGGGL
RSTFRVGRITFHWGRCNASSDGSEHGLNGVKFPLEMQIYCYEANNHQTIDDALRSGGQIT
ALAVLFEASVEDNENYEAIIDAVNSVRRYGKSSSVSPFVLQGLLPNSTEKYFIYNGSLTS
PPCHENVEWIIFKNTVFISEPQLEMFCEVMTMQQSGYVMLMDYLQNNYREQQPQFMGQVY
SSYTGTEEILTPICSSEPENVQGYPHNYTGLLVMWERPRAVYDANIEKYSVTYRQAQGDD
PPTFEYLTDGDQDVGAIIQDLETNTSYVVQVVAVCTNGLYGRQSDELIVDIPVIDPETDP
DPFEPDGEDDYPSTPLWVQPDSNQAPYPVQTTTSSPRFTATERHVSPSFGPKTTPKSSEN
YYQDVSVTSKPTPLQPTTLLTTVSTTKTKQPVPPVFDVKTTPKSTEYPYQGIPDKQTTIY
SPISTFKSTTEQPVPPVFDIKTTAASTENHYQDILEKQPAQLTTMSPAANLTTELLVSES
DYSSIAPSVVSEVLTDSSVAHRVKISPHDAAATSTSVAEEGKFTDSIGYGEITISSTDPA
SSFPQTEVQVQSTTPTVPLPTTTTASGGVLSPEFNGENSPTTTPVCDSQLCLHAIPVSIP
SSSLLSESVSTPAWDIMYATQSVPHSLSYPALSSSPSSSVSYWNVDSVFSGDDGDDGDML
SGSASGATLYNSTIPLQTLPNSTDSELSVWFNKEQNISHISKIFSTVSPSLQSSGALSSD
YSSYFTSSLLHNLVEFSDFSVVPLNVGQSSDDVSRISPHVSSSAKSLFLYLMPSSSISDM
SSVIEGHPSFSTVGTNGYSSTHLDLSFPTEPTCHLQFSVTANMNSITRSESSQVLGSYVS
LAPTKVLPTSVPEATSILTQSADGFLDSSASGWVVDQDWSQSSASGDGSPAPSLPSVFST
EGQVEEVELEEHSSSFYFESENLSEREATIFNVSLHPSPTLALGGVEEENSGSGENLTDN
ETSSDFSIPEHANRDSKDEPVEDASNSSHESRVGLVSSVEHRKKAVVPLAVISTLTCLCL
IMLIGILIYWRMCFQTAHFYIDDNTSPRVISSSSPMLSHTDEHEPLSSEQFVQHVTELHD
TKSFYREFEILKEYFEEIQSCTVDLETTTDSSIHPDNKSKNRYVNILAYDHSRVRLLTHT
DKDGTSEGDYINANYVDGFNKPRAYIAAQGPLKSSTVDFWRMVWEQNVGIIVMITNLVEK
GRRKCDQYWPLESQEEYGHFLVTVKSTKIMAYYTQRTFTIRNTHVKKASQKARANEKTVV
QYHYTQWPDTGVPESVLPVLSFVRKSSRAWTQDMGPIVIHCSAGVGRTGSYIVLDSMLKQ
IEEQGQVNIIGFLKHIRTQRNYLVQTEEQYIFIHDALVEAILSGETDVPASRIHSYVNDL
LTTGPSCTMCLEKQFKLVSQANTKQGDFTAALKDCNKDKNRTCSLIPMDRYRVCLSATSE
ETSDYINASYIMGYQNSNEYIITQSPLPNTVKDFWRMIWDHNAQIIVSLPDSTSLTEETE
PMVFWPRKDQPVRCKMFTVSLRGEEHVCLSNEEKLIVQDYILEDSQDDYVLEVRHYRAPR
WPNPDSPISKTFELISVIRGEQATKEGPMVVHDDCGGVTAGTFCTLYTLLQHLEAEGSVD
VYLVAKMINLMRPGIFTDIEQYQFLYKAILSLVGTQEDEKAFQSSRNTTTFPGGTASATD
SLESLV
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaccggagagcaaatgtctactttcgctgctcctgttagtcatctgtcaacta
gtggatgtggctcaaccctatggattcagatcacaaaagaagcttgcagaaaacatagac
tggtcctatgcaggaacattaaaccaaaacaaatggcacaagaaatacccatcatgcaat
aatgccaagcagtcaccaataaacatagaggagagcctggtgcaggtcaaagctcagttt
cagaagttgaggctcgaaggctgggaccagcagacctcagagtccacaacagtaaaaaat
gatggcaagacagtgacaatagatgtgggtggtgaattcagtgtaagtggagggggtttg
aggtccacgtttagggtgggccgcattacttttcactggggccgctgcaatgcctcttct
gatggctctgagcatggccttaatggagtcaaattccccttggagatgcagatatattgt
tatgaagccaataatcatcagactatagatgatgccctgcggtctggaggacagattact
gctcttgctgtattgtttgaggcaagtgttgaagacaacgaaaactacgaagccatcatt
gatgcagtcaacagtgtaagaagatatggaaagagtagcagtgtatctccgttcgttcta
caaggcctcctgccgaactccacggagaagtacttcatctataatggctcactcacgtct
cccccttgccatgagaatgtggagtggattatttttaaaaacacagtgttcatctctgaa
ccacagttggagatgttttgtgaggtgatgaccatgcagcagtccggttatgtgatgttg
atggactacttgcagaataattacagagagcagcagcctcaattcatgggccaggtctat
tcttcatacaccggcactgaagagatcctcacacccatttgtagctcagagccagagaat
gtgcagggatatccacataactacacgggtctgctagtgatgtgggagaggccgcgggct
gtgtatgacgcaaacattgagaaatactctgtcacctatcgtcaggcacaaggagacgat
ccacctacatttgagtacctcactgacggagaccaggatgtgggggccatcatccaggac
ctggaaaccaacaccagctatgtagtgcaggtggtggcggtgtgtactaatggtctgtat
ggacgtcagagtgatgagctgatagtggacatacctgtgattgaccctgaaacagaccct
gacccctttgaacctgatggagaggatgactatcctagcactcccttgtgggtccagcct
gactcaaaccaggcaccctatccagtgcaaaccactacatccagtcccaggtttactgca
actgagcgccatgtctctccatcatttggccccaaaacaacaccaaagtcttctgaaaat
tattatcaggatgtttctgtaacttctaaacccacaccactacaacccactacattgttg
actactgtcagcactactaaaacaaaacagcctgttcctccagtttttgatgttaaaacc
accccaaaatctactgaatatccttaccaaggcattccagataaacaaactaccatatat
agtcctattagtacatttaaaagtacaacagagcagcctgttcctccagtttttgatatt
aaaacaactgcagcaagtactgaaaaccattaccaagacattctagaaaaacagcctgcc
caactgactaccatgagccctgcagcaaatttgaccacagaattactcgtttctgagtca
gattatagcagcatagcaccaagtgtggtctcagaagttcttactgacagttcagtggct
catagagtaaaaataagtccacatgatgcagcagccacgtcaacctcagtggcagaggag
gggaagttcactgattcaattggctatggggaaatcactatttcttctacagatccagcc
tcctccttccctcaaacagaggtccaagtgcagagtacaactcccactgtgcctctcccc
acaaccaccactgcttctggtggtgttctttcaccagagttcaatggtgagaactctccc
actacgacccctgtgtgtgactcccagctctgcctgcatgctattcctgtgtccatcccc
tctagctctttgttgtctgagtctgtatctaccccagcctgggacattatgtatgctaca
cagtctgtcccccactcgctctcctaccctgcactgtccagctctccctccagctctgtg
tcttattggaatgtggactctgtatttagtggtgatgatggtgatgatggtgacatgttg
tctgggtcggcctcaggtgccaccttatataacagtactatcccccttcaaacattaccc
aactcaactgactctgaactttctgtgtggttcaacaaagagcagaatatttctcacatc
tccaagatctttagcactgtgtctccatctctgcagtcatcaggtgccttatctagtgac
tactcttcttacttcacctcctctctcttacacaatctggtggagttttcagatttttct
gtggtacctcttaatgttggtcaaagtagtgatgatgtttctcgcatctcgccgcatgtt
tcaagttctgcaaaatcattgtttttatacctaatgccctcctcatcaataagtgacatg
tctagtgtaatagagggccatccatctttctccactgttggaactaatggatacagttca
acacacttggacctatcttttcccacagagcctacatgccacctgcaattctctgttaca
gccaacatgaacagtatcacaagaagtgaaagttcacaggttcttggatcctatgtttca
ctggcgcccactaaagtgttgccaacctcggtcccagaggctacatcaatactcacacaa
tcagctgatgggtttctggatagcagtgcctcaggctgggtggtggatcaagattggtct
cagagctcagcttcaggagatgggagtcccgctccttccttacccagtgtcttctccact
gaaggacaagttgaggaggtggagctggaggaacactcttcatctttctatttcgagagt
gagaatttgtcagagagagaggctaccatatttaatgtttcccttcaccccagccctacc
ctggcactggggggtgtggaggaagaaaacagcggatctggagagaaccttacagataat
gagacatcctctgatttcagtatcccagagcatgctaacagagattcaaaggacgaacca
gtggaagatgccagtaacagtagtcatgagtctagggtgggtctggtgtccagtgtggag
catcgaaagaaggctgtggttcctctggctgtgatctcgaccctcacttgcctctgcctt
atcatgctaattggcattctcatctattggaggatgtgctttcagactgctcatttctac
atagacgacaacacatcccctagagtcatatcctcctcttctcctatgctaagtcacaca
gatgagcatgaacctctttcatcggaacaatttgtccaacatgttacagaacttcatgac
accaagtccttctacagagagtttgagattttgaaagaatattttgaggagattcagtca
tgcactgtggatctagaaactacaacggacagctccattcaccctgataacaagagcaag
aaccgatatgtcaacattttagcctatgaccacagtagagtcagactcttaacccacact
gataaagatggaacgagtgaaggggactatatcaatgccaactatgtggatggttttaat
aaaccgagggcttacatagcagctcagggccccctgaagtcgagcactgtggacttctgg
aggatggtgtgggagcagaatgttggcataatcgtcatgatcacaaatctggtggagaaa
ggcagaagaaaatgtgaccagtactggccattggaaagtcaagaagaatatggccacttc
cttgtgactgttaagagcaccaagatcatggcttattacacccaaagaacctttaccata
cgaaacacacatgtaaagaaggcttctcagaaagctcgtgctaatgaaaagacagtagtg
cagtaccactacactcagtggccagatactggtgtgcctgagagtgttttgcctgtactc
tcatttgtccgcaaatcctctagagcctggacacaggacatggggcccattgtgatacac
tgcagtgctggtgtggggagaacaggctcatacattgtcctggacagtatgctgaagcag
atagaagagcagggtcaggtgaacatcataggctttctcaaacacatccgtactcagagg
aactacctggtgcaaactgaggagcagtacatcttcatccatgatgcactggtggaagca
atcctaagtggagagacagatgtgcccgctagccgtattcatagttatgttaacgacctg
ctcactacaggaccttcatgcacaatgtgcctggaaaagcagtttaagctggtgagtcag
gcaaataccaagcaaggtgatttcactgctgctttaaaagactgcaacaaagataagaac
agaacctgctcgttgatacctatggatagatacagagtatgtttgtctgcaacatcagaa
gagacctcagactacatcaatgcttcttatattatgggatatcagaacagcaatgagtac
atcattactcagagtcctctgccgaacactgtgaaagatttctggaggatgatttgggac
cacaatgcccagatcattgtctcactgcctgatagcaccagcttgacagaggaaacagag
cccatggtgttctggcctagaaaagaccagcctgttagatgcaaaatgttcactgtgtcc
ttaagaggggaggagcatgtgtgtctgtctaatgaggagaagctgattgtacaggattat
atcctagaagattcccaggatgactacgtactggaagtgaggcattaccgtgctcctcgt
tggccaaacccagacagtccaatcagcaagacttttgagcttatcagcgtaattcgaggg
gagcaggccactaaagaaggccccatggttgtacatgatgattgtggtggtgtgacagct
gggactttctgcaccctctacaccctgctccaacatttagaggctgaaggctctgtggat
gtttacctggtggctaagatgattaacctgatgaggcctgggatcttcactgacattgag
cagtatcagttcctctacaaagccattttgagtctggtcggtacccaagaagatgaaaaa
gccttccagtcctccagaaacaccaccacattcccaggaggcactgcaagtgctacagac
agtctggagtccctggtgtaa
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