Silurus meridionalis (southern catfish): 124392507
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Entry
124392507 CDS
T08004
Symbol
abcc8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124392507 (abcc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124392507 (abcc8)
Transporters [BR:
smeo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
124392507 (abcc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_23
nSTAND1
ABC_ATPase
TraD_N
Motif
Other DBs
NCBI-GeneID:
124392507
NCBI-ProteinID:
XP_046715562
LinkDB
All DBs
Position
10:14272972..14323622
Genome browser
AA seq
1599 aa
AA seq
DB search
MIPRYRPRPGSTMSLSFCGSENNSIAYNVDRGVLNNGCFLDALTVVPHVFLLFITFPILF
IGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGFTQSLHLHLYM
PASLAFMAGITSIIYYHNIETSNFPKLLIALLIYWILAFITKTIKFAKYTEHGIGMRQLR
YCLTGLLVLLYGLLLTVEINVILGRRYMCFAHPTEVKPPEDLQDLGVRFLQPFVNLISKG
TYWWMNTFITSAHRRPIDLKVIGKLPIAMRALTNYLKLRKAFEAQKRPDGLQPQGPQWIW
RALREAFGKPLILSITFRFLADLLGFAGPLCISGIVHHISKKNHTIQAPAKLLGVYFISS
QEFLANAYVLAVLLFFALLLQRTFLQASYYAAIQTGINLRGAIQTKIYNKIMRLCTSNMS
MGEMTVGQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISALIGATIIT
LLAPVQYFVATKLSQTQKNTLEYSSERLKKTNELLRGIKLLKLYSWEHIFCSSVEETRRK
ELTSLQAFALYTSISIFMNAAIPIAAVLTTFVVHVHLSDDADLSPAVAFASLSLFHILVT
PLFLLSSVVRSTVKALVSVQKLSEFFSIDEIGEEQEPKATISAISTNHSNYQALPLKVVN
RKRPVRDEWNSFGLQSEQYIETAAAEDEDVCIKINSGYFSWTEGALTLSNVNIKIPFGQL
TMIVGQVGCGKSSLLLAALGEMQSISGTVTWNSIPKLDSEGDESPDVSSDEEFRKRGAVA
YASQKPWLLNASVVENITFEMPLIKQRYKTVIEACSLQPDIDILPQGDQTDIGERGIILS
GGQKQRISVARALYQTTNVVFLDDPFSALDIHLSDHLMQEGILKLLREEKRTVVLVTHKL
QYLPHADWIIAMKDGTIQTEGTLKDIQKSEPELFEQWKALMHRQDREFEKEIVAESMTVL
ERKNLRRAMYSREALKTEEEEEALGTALTEETVERDDDDNLSQVMRHRATIPWRSCGKYL
SSAGLLLLPLLLLSQLLKHTIMVATDVWLAHWTSDVIRAKVNAVQYNCTLVQDCGFSHLS
YLLVFSLLCCLGIALCLVTSVAVEWTGLSVAKKLHHNLLNNIVLAPMRLFETTPLGSLLN
RFSADTNTIDQHIPTTLECLIRSTLLCVSALGVISYVTPVFLIALTPLAIACYFIQKYFR
VAFKDLHQLEDSTQLPLLSHFSETVEGLTTIRAFRYEARFRQRLLELTDANNVASLFLTA
ANRWLEVRMEYIGACIVLIAAVASITNSLYNHLSTGLVGLGLTYALMVSNYLNWMVRNLA
DMEAQLGAVKRINNLLKTEPENYEGLLSPSQVPECWPQQGEIHIQNLSVRYDSTLKPVLK
HANAHIRPGQKVGICGRTGSGKSSFSLAFFRMVDAFEGRIIIDDIDIAKLPLQTLRSRLS
IILQDPILFSGTIRFNLDPEMKATDSMLWEALEIAQLKPVVQTLHGGLDAMVTEGGENFS
QGQRQLFCLARAFVRKSSILIMDEATASIDMATESILQKVVMTAFADRTVVIIAHRVHTI
LNADLVMVMKRGEILEFDKPEVLLSTEGSAFASFVRADK
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgattccccgatacagaccgagaccaggctccaccatgtccctgtccttctgtggcagt
gagaacaactccattgcctacaatgtggaccgtggtgtgcttaacaatggatgtttcctc
gatgccctcactgtggtgccccatgtcttcctgctcttcatcaccttccctatccttttc
attggttggggcagccaaagctccaaggttcacattcatcacagtacatggcttcatttc
cctggacataacctgcgctggatcctcaccttcatccttctgtttgtgctggtgtgtgag
atcgcagaggggattgtctctgatgggtttacacagtctcttcatctacatctgtatatg
cctgcatccctggctttcatggctggtatcacttctataatctactaccacaacatagag
acctccaattttccaaagttgttgatagcattgcttatttattggatcttggcatttatc
actaaaaccatcaagtttgccaagtacacagagcacggcattggtatgagacagttgcgc
tattgcttgaccggcctccttgttctgctctatggcctgctactgactgtggagatcaat
gtcatacttgggcggcgctatatgtgttttgcccatcccactgaggtaaagcctcctgaa
gacttgcaggacttgggtgtgcgttttctgcagccattcgtcaatttgatctcaaagggt
acatactggtggatgaacacttttatcacctcggctcacaggcgccccattgacctgaag
gtcatcggcaaattgcccattgccatgagggcactcactaattatctgaaactgcgcaag
gcctttgaagctcagaagaggcctgatggccttcagccacagggtcctcaatggatctgg
agggcgctacgtgaggcttttgggaagcccttgatcctaagcattaccttccgcttcctg
gctgacctgctgggttttgctggcccgttgtgcatctcgggtattgtgcaccacatcagc
aagaagaaccacactatccaggcaccagcaaaattattgggagtttatttcatctcctct
caggagtttctcgctaatgcctatgtactggctgtgttgctgttctttgcgctgcttctg
cagaggacctttctacaagcctcctattacgcagccatacaaactggcatcaacctgaga
ggagccatccagacaaagatttacaataagatcatgcgtctgtgcacgtccaacatgtct
atgggggagatgacagtgggccaaatctgcaacctagttgccatagacaccaaccaattg
atgtggttcttcttcctgtgtccaaacctgtgggccatgccagtacagattatagtggga
gtaattctactctactaccttctgggaataagtgccttgattggggcaaccatcattacc
ctcctggcccctgtgcagtactttgtggctaccaaattgtcccaaacacaaaaaaacacc
ctggagtactccagtgagcggctgaagaaaaccaacgagttgttgcgtggtatcaagcta
ctaaagctctactcgtgggagcacatcttctgttccagtgtggaggagaccaggagaaaa
gagctgaccagcctgcaggcctttgcactttacacttccatttctatatttatgaatgct
gctataccaattgctgcagttcttactacatttgtggtccatgtgcacctgtctgacgat
gcagatctatctccagctgtagcgttcgcctcactctcccttttccatatcttggtcaca
cctctctttctcctgtccagtgtggttcgctccacggtcaaagcccttgtcagtgtgcag
aagctgagtgagttcttctccattgatgagattggagaagagcaagagcccaaggccacc
atttcggccatctcaaccaaccacagcaattaccaagccctgccactgaaagttgtaaac
cgcaagcgtccagtgagagatgagtggaatagctttggactacagagtgagcagtacata
gaaacagccgcagcagaagatgaagatgtctgcatcaaaataaacagtggatatttcagc
tggactgaaggagcactcacactttccaatgtgaatataaagattccattcggtcagctg
actatgatagtgggtcaggtgggctgtggaaaatcctccctgttactggctgcactaggg
gagatgcaaagtatttctggcactgtgacatggaacagtattccaaagctggattcagag
ggtgatgaaagtccagatgtctccagtgatgaagaattccggaaaagaggtgctgttgca
tacgcctcccagaagccctggcttcttaatgcctctgtggtagagaacatcacctttgag
atgcctttgatcaaacaaaggtataagaccgtgatcgaggcatgctccctgcagccagat
attgacatcctaccacagggggaccagacagacattggtgaaaggggaatcatcctctct
ggaggccaaaagcagcgtatcagtgtggcccgtgccctctatcagaccaccaatgtggtc
ttcctggatgacccattctcagcactggacatccatctgagtgatcatctgatgcaggag
ggtattctgaaactgctccgggaggagaagagaaccgtggtgctggtcacccacaaacta
cagtatttgcctcatgcagactggattattgcgatgaaggatggcacgattcagacagag
ggcacactaaaagacatccagaaatcagaacctgaactgtttgagcagtggaaagcgctc
atgcaccgccaggaccgggaattcgagaaggagattgtagcagagagtatgacggtactg
gaaaggaagaacctgagaagggccatgtactccagagaagcactgaagacagaggaagaa
gaggaagcactggggactgcactcacagaggaaacggtggagcgggatgatgacgataac
ctgtcacaggtaatgaggcacagagccacgattccttggcgttcatgtgggaaataccta
agttcagctggtctgctgctgctgcctttactgctgctctctcagctgctcaaacacacg
atcatggttgccactgatgtttggcttgctcactggacctctgatgtcatccgtgccaag
gtcaacgctgttcaatacaactgcacactagtacaggactgtggattcagtcacttgtcg
tatctactggtgttcagtttgctatgttgcctgggcattgcgttgtgtctagtaacatct
gtggctgtggagtggacagggcttagtgtggccaaaaagctgcaccataacctgcttaat
aacatcgtactcgctcccatgagactctttgagacaactcctttgggaagccttctgaac
cgattttctgctgacacaaacacaatagaccagcatattcctactactttggagtgtttg
attcgctccacattgctgtgtgtgtctgcccttggtgttatttcatatgtcacacctgtt
ttcctcatcgctctcactccgctcgccattgcctgctacttcatccagaaatacttcaga
gtggcgttcaaagatctgcatcagcttgaggacagtacccagctccctttactctctcac
ttctctgagactgtagagggactcaccactattcgggccttcaggtatgaggccagattt
cggcagagactactggagcttacagatgctaataatgttgcatctctcttcctcactgct
gccaaccgttggctggaggtccgcatggagtatattggtgcctgtattgtcctcatagct
gcagtggcctccatcaccaacagtctttacaaccatctgtccactggcctggtggggctg
ggactgacctatgctctgatggtatcaaactatcttaactggatggtgcgtaatctggct
gatatggaggctcaattaggagcagtgaaaaggataaacaacctactgaagactgagcca
gagaactacgaggggctgctctctccatctcaggtccctgagtgctggccacagcagggt
gagattcacatccagaacctgagtgtgaggtatgacagcacgctgaagccggtcctaaag
catgccaatgcacacatcagaccaggacaaaaggtcggtatctgtggcaggacaggaagt
ggcaaatcttctttctccttagcgttcttccgcatggtggatgcctttgagggacggatt
atcatagatgatattgacatagcaaagctgccccttcagacactgcggagccgtttatct
atcatccttcaagatcccattctcttcagtggaacaatacgttttaatctagacccagag
atgaaggctacagacagcatgctttgggaagctctagaaattgctcaacttaaaccagtt
gtgcaaacccttcatggaggacttgatgccatggtaacggaaggtggggagaatttcagt
cagggacaacggcagctgttctgcctggcacgagcgtttgtacgcaaaagcagcattctg
atcatggatgaggccactgcctctatagacatggccacagagagtattctacagaaagtt
gtgatgactgcctttgctgacagaacagtggtcattatagcgcatcgtgtacacactatc
ctgaatgcagatctggtaatggtgatgaagaggggcgagattttggagttcgataaaccc
gaggtcctcctcagtacagagggaagcgcttttgcctcatttgttcgagcagacaaatga
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integrated database retrieval system
