Silurus meridionalis (southern catfish): 124392517
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Entry
124392517 CDS
T08004
Symbol
acsl1b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1b
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00061
Fatty acid biosynthesis
smeo00071
Fatty acid degradation
smeo01100
Metabolic pathways
smeo01212
Fatty acid metabolism
smeo03320
PPAR signaling pathway
smeo04146
Peroxisome
smeo04216
Ferroptosis
smeo04920
Adipocytokine signaling pathway
Module
smeo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124392517 (acsl1b)
00071 Fatty acid degradation
124392517 (acsl1b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124392517 (acsl1b)
09143 Cell growth and death
04216 Ferroptosis
124392517 (acsl1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124392517 (acsl1b)
03320 PPAR signaling pathway
124392517 (acsl1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smeo01004
]
124392517 (acsl1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124392517 (acsl1b)
Enzymes [BR:
smeo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124392517 (acsl1b)
Lipid biosynthesis proteins [BR:
smeo01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
124392517 (acsl1b)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of breast milk
124392517 (acsl1b)
Exosomal proteins of breast cancer cells
124392517 (acsl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
124392517
NCBI-ProteinID:
XP_046715583
LinkDB
All DBs
Position
10:complement(19274290..19295975)
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AA seq
697 aa
AA seq
DB search
MQAQELLKQLRVPELAEVRDYIRSLSTGTLVGMGAFAALTTYWYTTRPKALKPPCDLHMQ
SVEVPGGEFARRSVVVDADKLLSFYYDDATTMYEIFTRGLRVSNNGPCLGSRKPKQPYEW
LSYSEVAERAENLGSALMHKGHSKTQDQYIGIFAQNRPEWTISELACYTYSLVSVPLYDT
LGTEAIDYIIEKTGISTVVCDVLAKARLLLDCVAGKQHSLKTLIVMEEFDSELVAQAQKC
GVDVMSLKDAEALGKAHRQQPAPPKPDDVAIICFTSGTTGSPKGAILTHRNIVSNVSGFI
KITETSCPLSPSDSHISYLPLAHMFERVVQGVMLIHGARIGFFKGDIRCLMDDLLALRPT
VFPVVPRLLNRMFDKIFGQANTPLKRGILGFAFRRKEAELMSGIMRRNSLWDKVIFKKVQ
ASVGGKVRLMLTGAAPVSAPVLTFLRAAMGCQFYEGYGQTECTAGCTVTLSGDWSAGHVG
PPLPCNIMKLVDVAEMNYLAMNGEGEVCVKGPNVFKGYLKDPEKTEEAIDQDGWLHTGDI
GRWLPNGTLKIVDRKKHIFKLAQGEYIAPEKIENIYIRSEAVVQAFVHGDSLQACLVAII
VPDPDFLPGWAKKRGFHGSYEELCSSKEVKNAILEDIVKLGKESGLKSFEQVKDIALHTE
MFSIQNGLLTPTLKAKRADLRNHFRQQIDQLYSNIHM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcccaggagctgttgaagcagctgcgtgtgcctgagctggccgaggtgagggat
tacatccgcagcctgtccaccggcacactggtgggcatgggggccttcgcagcactcact
acctactggtacaccactcgacctaaagctctcaaaccaccttgtgatctgcacatgcag
tccgttgaggtcccgggaggagagtttgctcgtaggtcagtggtagtagacgctgacaag
ctcctgtctttttactatgatgatgctacgacaatgtacgagatctttacaaggggctta
cgcgtgtcaaataatggaccttgcttaggctccagaaagccaaagcagccgtatgagtgg
ctctcctattcggaggttgcagagagagctgagaacctgggctcagcactgatgcacaaa
ggtcactccaaaacccaggaccagtacatcggcatttttgctcagaacagacctgagtgg
accatctcagagctagcatgctacacatactctctggtatcagtgcctctgtatgacaca
cttgggactgaggccatcgattacatcattgaaaagaccggcatctccacagtggtgtgt
gacgttctggcgaaggctcgtctactcctcgactgcgtggctggcaaacaacactccctg
aaaaccctgatcgtgatggaggagtttgattcggagctggtggctcaagcacagaaatgt
ggtgtggacgtaatgagcctgaaagatgcagaggctcttggaaaagctcatcggcagcag
cctgcaccccctaagcctgatgacgttgctattatttgctttactagtggaaccacagga
agcccaaaaggggcaattcttacccacagaaacattgtgtccaatgtttctggctttatc
aagataacagagaccagctgtcctttaagtcccagcgactcgcacatttcttacctgccc
cttgcacacatgtttgaacgagtcgtgcagggtgtgatgctaattcacggggctcgcatt
ggctttttcaagggagatatccgctgcctcatggatgaccttttggctttgcggcctact
gtctttccggttgtgccacgtttgctcaaccgaatgttcgataagatctttgggcaggct
aacactcctctaaagagggggattttgggattcgctttccgaagaaaagaggctgagctg
atgagtggcattatgagaagaaacagtctgtgggacaaagttatctttaagaaagtccag
gccagtgttggaggcaaagtccgcttgatgctgactggtgctgctcctgtgtcagctcct
gtgctcactttcctccgtgcagctatgggatgccagttttatgaaggctatggccagacc
gagtgcacagccggctgcacggtgacgttatccggagactggtcagcaggtcatgtcgga
cctcccctgccttgtaacattatgaagttggtggatgttgctgagatgaattatctggct
atgaatggagaaggagaggtgtgcgtgaaggggcccaatgtgtttaagggatatctgaaa
gacccagaaaagacagaggaggccatcgaccaggatggttggctccacacgggagatatc
ggcaggtggctgccgaatggcactctgaagattgtggaccgtaaaaagcacatctttaag
ctggcacaaggagagtacattgccccagagaagatcgagaatatttacatccggagtgaa
gctgtggttcaggcttttgtgcatggagacagtttacaggcctgcctcgtagccatcatt
gtgcctgatccggacttcctgcctggctgggccaaaaaaagaggatttcacggctcatat
gaggaactctgcagcagcaaggaagtgaaaaatgccatattggaggacattgttaaactt
ggcaaagaaagtggtctgaagtctttcgaacaggtgaaggatattgctctacacacagag
atgttctcgatccagaatggcctcctgacaccaacacttaaagccaagcgtgctgacctc
aggaaccatttcaggcagcagatcgaccagctctactccaacatccacatgtga
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