Silurus meridionalis (southern catfish): 124392527
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Entry
124392527 CDS
T08004
Symbol
tbc1d2
Name
(RefSeq) TBC1 domain family member 2A
KO
K20165
TBC1 domain family member 2A
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124392527 (tbc1d2)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124392527 (tbc1d2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_8
PH_3
Motif
Other DBs
NCBI-GeneID:
124392527
NCBI-ProteinID:
XP_046715601
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All DBs
Position
10:complement(15492809..15514100)
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AA seq
969 aa
AA seq
DB search
MEGEGGCIGNPSSANMSQQLPLLAETHKLVAEGERDSVFESLEDTHTETMGLSAINEQKG
GTQVVNPRPESTTVCLTDSETKLCGYLHKQGGPLKAWKFRWFTYDEKKCQLFYYRTAQDV
NPLGKVELRNATFSYPLQGEEGTFHIQTPERTFILKAANRDAKMYWLQQLQLRRWQHREL
LCSDSSLPMPEQHTQNGRQYLDTCPANFLPVVKIPSGLVGVEAANVPVQTNPLNVSIKHP
LIEIQNSVHSFLLRRPSAEVGRSVFWVESSATQADTPKTNFSQSSNSEDSFVQTLSPSSV
LPPDLECERPCENLPARGLSLMLPNGKYKKANSATFPFDRKEANTIERLSHFKQENLTLA
MEVQAQKELVWLLHKALEAAQLEKRACAQYLAAENEQERLELLRHDARCTADLRERLEQL
RHENEALKRSLEERDAHVKELQDSLKLLMEKNHAKQEVIVKLSEQVSTCMADPKRAVSFE
RISAEGLRQLVQEMDNLKDDMEAYKTQNKFLNSEIYQLTRLWQNSSEQEKSLMVKCAYLE
ANNCQMESRYLVVLRKLQENKELPAEQRVVIKNLIDEALQADKRDAIRFDSFRDYDEYGF
KIIPDYEMEDMKLLAKIQALEIRSHNLLQQETGDRSLLARWTQFLGGRSPDDLSSSEELK
NLVRAGIPRQYRASVWCWMVRARTHTLRQRHPDLFQKLCKKSQATPHPAARQIQLDLHRT
LTTNQCFSSPSSPMVQQLQRVLLAFSWQNPAVGYCQGLNRLAAIALLVLQSEEEAFWCLV
AIVQFLMPKDYYTKTLLGSQADQRVFKDFMAEKLPRLLAHLEEHGVDVSLVTFNWFLVLF
VESLPSDILLKVWDAFLYEGTKVIFRYALAIFKYKEDDILKIHDNVEIYQYLRLFTKTVT
DGRKLMSIAFLDLNPFRMKHVKNRRAVHMQRLQAELNELEKLQNEYSSENNQRKDNVFDL
IPSEDDDDA
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggagggagagggaggctgcataggaaatcccagtagtgctaatatgtctcagcaactt
cctcttctggcagaaacacataagcttgtggcagaaggagagagagacagtgtgttcgag
agcctggaggacacacacacagagacgatgggtctgtctgccataaatgagcaaaagggg
ggcactcaggttgttaatccaagaccagagagcaccactgtctgtttaacagactcagaa
actaagctttgtggatatctgcacaagcagggtgggccactaaaagcctggaaatttcgc
tggttcacctacgacgagaagaaatgtcagctgttttattatcgcactgcacaggatgtg
aaccctcttggcaaagtggagcttcgcaatgctacatttagctaccctctacaaggagag
gaaggaacctttcacattcagacacctgagcgcactttcatacttaaggcagcaaacaga
gatgctaagatgtactggctccagcagctgcagctgagacgttggcagcacagagaactg
ctatgctcagactcctcattgccaatgccagagcaacacacacaaaatggccggcaatat
ttagacacctgccctgcgaacttcctgcctgtggttaagatcccatcgggtctagttgga
gtggaagctgccaatgttcctgttcaaaccaacccactcaatgtgtcaattaaacaccca
cttatagagatacaaaactcagtacacagttttctccttcgtcggccatctgcagaagtg
ggccgtagtgtattttgggtggaatcctcagccacccaggctgatactcccaaaacaaat
ttctcccagagttcaaattctgaagactcctttgtccagacactatctccaagctcagtt
ctgcctcctgatttggagtgtgagagaccttgtgaaaatctaccggcccgtggtttatct
ctaatgctaccaaatgggaaatataagaaagcaaactctgccacgtttccattcgaccgc
aaagaggcaaacaccattgagcgcctttcacatttcaaacaggaaaatctcacactggcc
atggaggtccaagcccagaaggaattagtgtggctgctgcacaaagccctggaagcggct
cagctggagaagcgtgcgtgtgctcagtacctggcagctgagaacgaacaggagcgtctg
gagctgcttcgtcatgatgcgcgctgcactgcggacttgcgcgagcgcctggagcagctg
cgacatgagaatgaggcactgaagagaagcttggaggagagggacgcgcatgtgaaagag
ctacaggacagtttgaagctgctcatggagaagaaccatgccaagcaggaagtcattgtc
aaactatctgagcaagtgtcaacttgcatggctgacccaaagcgtgccgtgtcttttgag
cgcatcagtgcagagggtctgaggcagcttgtacaggagatggacaaccttaaggatgac
atggaagcttacaaaacccagaacaagttcctgaactctgaaatctaccagctgaccaga
ctgtggcagaacagctcagaacaggagaaatctctcatggtgaagtgtgcatatctggaa
gccaacaactgtcagatggagagccggtacctggtggtcctgagaaaactccaagagaat
aaggaactgcctgcagagcaaagagttgttattaagaacttaatagatgaggcactacag
gctgataagagagatgccatcagatttgacagcttcagggactatgacgaatacggcttt
aagatcatccctgactatgaaatggaggacatgaagctgctggctaaaatccaagctctg
gagatccgctctcacaatctgctccagcaggagactggagaccggtcacttctggctcgg
tggactcagttcttaggaggtcgttctcctgatgatctctcctcgagtgaggagttgaag
aatctggtgcgagcaggaatcccgcgtcagtacagagcgtctgtgtggtgctggatggtt
cgggccaggacccacacactgcgccagcgccaccctgaccttttccagaagctgtgtaaa
aagagtcaggccacaccacatccggcagctaggcagatccagctggacctgcaccgcaca
ctcaccaccaaccagtgcttctcatcaccatccagtccaatggtgcagcagcttcaaaga
gtcctgctggcattctcctggcaaaacccagctgtcggctactgccagggactcaacaga
ctggctgctattgccttgctggtgctgcagagcgaggaggaggctttctggtgtcttgtg
gccatagtacagttcctcatgcctaaggactactacaccaaaacacttctgggctctcag
gcagaccagcgtgtgtttaaggactttatggccgagaagttgccacggttgttggctcat
ttggaggaacacggtgtggacgtttccctcgtcacatttaactggttcctggtgttgttt
gtggagagtttgcccagtgacattctgcttaaagtctgggatgctttcctttatgaaggc
actaaggttatatttcgatatgcacttgcaattttcaaatacaaagaggacgacatctta
aaaatccatgacaatgtggaaatctatcagtacctccgcttatttaccaaaacagtcaca
gacggcaggaagttgatgagcatcgcattcttggatttgaacccgttccgtatgaagcat
gtgaagaaccggcgtgctgtgcacatgcagcggctgcaagctgagctcaatgaactggag
aaactgcagaacgagtacagctcggagaacaaccaacgcaaagacaatgtctttgacctc
attcccagtgaggatgatgatgatgcatag
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