Silurus meridionalis (southern catfish): 124392601
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Entry
124392601 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vc-like
KO
K10357
myosin V
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124392601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124392601
04131 Membrane trafficking [BR:
smeo04131
]
124392601
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124392601
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124392601
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
124392601
mRNA cycle factors
P-body specific factors
124392601
Membrane trafficking [BR:
smeo04131
]
Others
Actin-binding proteins
Myosins
124392601
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
124392601
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
124392601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Csm1_N
AAA_16
Rota_NS35_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
124392601
NCBI-ProteinID:
XP_046715705
LinkDB
All DBs
Position
10:6043856..6065405
Genome browser
AA seq
1747 aa
AA seq
DB search
MALSELYTKYNRVWVPDAEQVWKSAELLIDYTPGDPALHLQLEDGTEIHYPVEVNGQLPP
LRNPDILVGENDLTALSYLHEPAVLHNLRVRFVDSKIIYTYCGIILVAINPYKQLPIYGD
AVIRAYSGQNMGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFA
VVSKSSKNTQVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYSEISFDQRYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQMCACADQPQFKSLRLLSADKFYYTCMGGETEIQGVDD
RADMAETCRTFNLLGLKNEFQSDVFKMVAAILHLGNVVIRAVGSDQSSISSTDSHLAVFC
DLLEVREENVCRWLCSRRILLASETVIKPQPRDRAINARDALAKHLYSYLFDCIIHRINQ
ALRVPGKPHSFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDNNWLQKLYNYLSSKPMFEKPR
LSNEAFVIHHFADRVEYQCRGFLEKNRDTLYEELVDIMRASKFPLLAGFFNEEDQSSVHT
TKRVKVKAARPGVKPANKQLRSTVGDKFRISLYLLMETLNATTPHYVRCIKPNEQKLPFE
YDSKRVVQQLRACGVLETVRISAQSYPSRWTYIEFYSRYSILMSQAELXIGEKKQTCKTV
LQRLIHDSNQYKFGRTKIFFRAGQVAYLEKLRLDYLRTACVTIQKHVRGWTQRRRYLRMR
QAAIIIQQYIRGKRQIRRMVTAAALKQGWAAVIIQKHCRGYLVRRLYQLVLVATVTIQAY
TRGCIARKRYRKMVEEHTALVIQKYARAWLVRRRFQTIRRLVINVQLSYRVQQLRKKLEE
QSKENRGLMERLTSLANAHAQGLEKVQSLEVELSKAANEKLSMEEREKKRKEETSQVIAQ
LQNERDKAKLENQALQAKLKDSIQQMTDHFEELKKKLLEDLEREERLRKVAEHSSELQKE
DLDKEIEVLKNENRKLREAKIHLQAKAEEDTQINQELQEQLGQLTKHVRVIPELHREIHS
LQNEKTEADRKLREQTEQTRAKMNMIARQLLGDTKEEETINRFTKETTEAADDKDLQFAF
NGLQNATRLVEAHLREQREINESKLEALVFKNDHLTKENHQLQTLFQEKSDVNHSFGQEV
ARLTAENMVIPELKQQVTELQRHRQELETQLEEQRHEMTENNIRVSNELQHKLEEEGSQR
RLLEKRNRESEREREKMDKRLEEFEETIEQLKRHQQTDNETKNKLRQETSRLTAENMEFE
EQLDTKDRTIKRLQDQIKALQAPGKVSEKAGPVIPKEYLGMLEYRKEDEGRLVRALILEL
KPRGVVVNMIPGLASYLLFMCVRHSDYLNDGEKLKSLMQAIISGIKQVTMDHQENFEVLS
FWLSNTYYLLNCLKQYSGEEEFIKHNTPRQNKNCLQNFDLSEYRQVFSDLAIHIHDQFLD
AMEDALFPMIVPGMLEHESLQGISSMKPTGFRKRSNSMLGDGFIEGEGQNYSVSSILQLL
SDYHSCMAQQGMDPQLQGQALRQLFYLIGATSLNSILLRKDLCSCRKGMQIRCNISYLEE
WLRDKGLQGYNIMETLGPLSQAAWLLQVNKTTDDDAAEIQQRCHELSPVQIVKILNSYTP
IDDFEKRVAPSFVRKVQALLQEREGSAQLMMDAQYRFQVTFPFCSSTQALELLQVPNSLH
LSFVTLI
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccgagctgtacaccaagtataacagagtatgggtgccggatgcggagcag
gtgtggaagtcagctgagctcctgatagactacacacctggagatccagctctacacttg
cagctagaagatggaactgagatccattacccggtggaggtgaacggtcagttacctcca
cttcgtaacccagatatcctggtgggggagaatgacctaaccgctctgagctatctccat
gaaccggccgtgctgcacaacctgcgtgtcagatttgtggattctaaaatcatatacacg
tactgtggcattatcctagtggcgattaatccgtataaacagcttcccatttatggagat
gcagtcattcgtgcttattctggccagaacatgggagatctggatcctcatatatttgct
gtggcagaagaagcttataaacagatggcaaggaacaacaagaatcagtccattatagtc
agtggcgagtccggggcgggaaagactgtgtccgctcgctatgctatgagatacttcgca
gtggtcagcaaatcgagcaaaaacactcaggtggaagacaaggttttggcatcgaacccc
atcactgaagcaataggtaacgcaaagaccaccaggaatgacaacagcagccgatttggg
aaatacagtgaaatcagctttgaccagagataccagatcattggtgctaacatgaggaca
taccttctagagaagtctagagtggttttccagtcagagaatgaaagaaactaccacatc
ttctatcagatgtgtgcttgtgcagaccaaccgcaattcaagagcttgagactgttgagt
gcagacaagttttactacacctgcatgggaggggagacggaaatccaaggagtggacgat
cgtgccgacatggctgaaacctgccgcactttcaatctactgggattgaagaatgaattt
cagagcgatgtattcaagatggtggcagcgattttgcatttgggcaatgtggtgatcaga
gcagttggctcagaccagtcatccatcagttcgactgactctcacctggcagtgttctgc
gatctgctcgaagtcagagaagaaaacgtgtgtcgctggttatgttctcggcgcatcctc
ctggcatctgagaccgtgatcaaaccgcagccaagggatcgtgcaataaatgctcgcgat
gcactggccaagcatctttattcttacctcttcgattgcatcatccacaggattaaccaa
gccctgcgtgtgcctggaaaaccacactcttttattggagtgctggatatctatggattt
gaaactttcgatataaatagttttgagcagttttgcatcaactacgccaatgaaaaacta
cagcaacagtttaacttgcacgtgtttaaactagagcaagaggagtacatgaaggaggac
atcccctggacgctgattgatttctatgacaaccaaccagtcatcgatcttattgaagcc
aaaatgggcatcctggacttgctggatgaggagtgtctgtttcctcagggtactgataac
aactggctgcaaaagctctataattatttgagctcaaagcctatgtttgagaaacctcgt
ctatccaatgaggcgttcgtgatccatcactttgcagacagggtagaatatcagtgtaga
ggtttccttgagaagaatagagacaccctttacgaagagctggtggacataatgagagcc
agcaagtttcctctcttggcaggtttctttaatgaagaggatcaaagttctgtgcataca
acgaagcgtgtcaaagtgaaagcagcacgacctggagtcaaaccggccaataagcaactt
agaagcaccgtaggagataagtttcggatttcattgtatcttttgatggaaactctcaac
gctactacaccgcattacgtccgctgcattaagcctaatgagcagaagctgccctttgaa
tacgattcaaagcgtgtggtgcagcagttgcgggcttgtggagtactagaaactgttcga
attagtgctcagagctacccgtctaggtggacctacattgagttctacagccgttacagt
attctaatgagccaggcagagctcnagattggggagaagaagcaaacgtgtaaaacagtg
ctgcagaggctcatacatgactctaatcagtataagtttggacggaccaaaatcttcttc
cgggcaggacaggtggcgtatctagagaagctgcgtttggattatctgcgcactgcgtgt
gtgaccattcagaaacatgtgaggggctggactcagagacgcaggtatctgcgcatgaga
caagccgccatcatcatccagcagtacatccgtggcaagaggcagatcaggcgcatggtt
acagcagcagctctgaagcagggatgggcagctgtgatcattcagaagcactgtcgtggc
tatcttgtacgccggctttaccagctcgtcctggtggctacagtcaccattcaggcatat
accagggggtgcattgcacgcaagcgctacagaaagatggtggaggagcatacggctctg
gtaatacagaagtacgctcgggcctggctggtgcggcgccgcttccagaccataaggcga
ctcgtcataaacgtgcagctgtcttaccgggtccagcagctgcgcaagaaattggaggaa
caaagtaaagagaaccgtgggttaatggagagactgaccagtctggccaacgcacatgct
cagggattggaaaaggtgcagtccctggaggtggagctcagcaaagcagccaacgagaag
ctttctatggaggagagagaaaagaagaggaaagaggaaaccagtcaggtgattgctcag
cttcaaaacgaaagggataaagccaagctggagaatcaggctctccaggcgaaacttaaa
gattccatacaacaaatgacagaccattttgaagaactgaagaaaaagctcttagaggac
ctagagagagaagagaggctacgaaaagtcgcagaacacagcagtgagctgcagaaggag
gatttggataaagaaattgaggtgctgaagaacgagaatcgcaagctgagagaagccaag
atccacctacaggctaaggctgaggaggacacccagatcaaccaagagctccaggagcag
cttggtcagctcaccaaacatgtcagggtgatcccagagttacatagggagattcacagc
ctccagaatgaaaaaactgaagcagacagaaagttgagggagcaaactgagcagaccaga
gcaaaaatgaacatgatcgctaggcaacttctgggtgacacaaaggaagaggagaccatt
aacaggttcacaaaagagaccacagaagctgctgatgacaaagatctacagtttgcattt
aatgggctgcagaacgcaaccaggcttgtggaggctcacttacgggaacaaagggaaatc
aacgaaagtaagctggaggcactggttttcaaaaacgatcacctgactaaagagaaccat
cagctgcaaaccctctttcaagagaagagcgatgtcaaccacagctttggtcaggaggtg
gcccggctcactgcggaaaacatggtgatccctgaactgaagcaacaggtaacggagtta
cagcgtcacagacaagagctggaaacacaactagaggaacaacgacatgagatgactgaa
aataatataagggtatccaatgagcttcagcataagcttgaggaggaaggctcacagaga
aggcttttggagaagaggaacagggaaagtgagagagaaagggagaagatggacaaaagg
ttagaggagtttgaggagaccatagagcaacttaagagacatcagcaaacggacaacgaa
accaaaaacaaactcagacaggagacctcacgtcttacagctgagaacatggagtttgag
gagcaattagatacaaaagacagaaccataaagaggcttcaggaccaaatcaaagctctt
caggcaccaggaaaagtcagtgaaaaagctggaccagttattccaaaagaataccttggc
atgctggagtacaggaaagaggatgaaggcaggcttgtacgggcgttaatacttgagctg
aaaccaagaggagtggtggtgaatatgatccctgggttggcatcctatctgctcttcatg
tgcgttcggcattctgactatctcaatgacggagagaagctgaagtccctcatgcaagcc
atcatcagtggaattaaacaggtcaccatggaccatcaggaaaactttgaggttttgtct
ttttggctctccaacacgtactacctgctcaactgcctcaaacagtacagcggagaagaa
gagtttataaagcacaatacaccacggcagaataaaaactgcctgcagaactttgacctg
tccgaatacagacaggtgttcagcgatcttgccattcacatccatgaccagtttctcgat
gcgatggaggatgctctgttccctatgattgtccctggtatgctggagcatgaaagtctg
cagggcatctcgagcatgaagccaacaggtttccgtaagcgctccaacagcatgctggga
gatggatttatagagggcgagggccagaactacagcgtttcttctatcctacagcttctg
agtgactaccacagctgtatggcacagcagggcatggatccgcagctgcagggtcaggct
ctccgccagctcttctacttaatcggagccacttcactcaacagcatccttctgcgcaag
gacctctgctcctgccgcaagggcatgcagatcaggtgtaatatcagttacctggaagag
tggctgagggataaaggccttcagggctacaatattatggagactctagggccgctgtcc
caggctgcatggctcctgcaggtgaacaaaaccacggacgacgatgcagctgagatccag
cagagatgccacgagctctcaccagttcagattgtgaagatcctcaactcgtacactcct
atcgacgacttcgaaaaacgagttgcgccgtcttttgtgcggaaagttcaggcactgctt
caggagcgtgagggctcagctcaactgatgatggacgcacagtaccgcttccaggttact
tttcctttctgttcatccacacaagcactggagctcctgcaggtgcccaacagccttcac
ctgagctttgtcactctcatatga
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integrated database retrieval system
