Silurus meridionalis (southern catfish): 124392653
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Entry
124392653 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124392653
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Gene silencing
Transposable elements
124392653
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GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
124392653
NCBI-ProteinID:
XP_046715778
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Position
10:296201..297602
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AA seq
343 aa
AA seq
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MACPFDEDPVDVEAEIIRGFFRRERVIRPRIDVFAYPNEYLKERYRFSKDSLVYLTRLLK
LHIANVTKXFALSTENILCIALRFFASGHFLYSVGDSEHVGKATVCRAVRTVCLALKQFL
PTFVQFPGHKPLLVIKDEFHRVAGFPNVIGCIDGTHIPIKAPPINEGDCVNRKSIHSINV
QVICEATQVITNVEAKWPGSMHYARIFRESSLCQTFQQGQYNGYLLGDRGYPCLPYLMTP
YPEPEPGPQTRFNLALSRTRAKVEMTIGILKSRFQCLRGLRVSPERACDIIVACVVLHNI
ATIRGERHPPCIEEDGPEEHLQILEANRDGRLLRDRICQNYFY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcccttttgatgaggatcctgtggacgtagaagcagaaattatacgaggtttt
tttcgtcgggagagggttataagaccgcgtattgatgtgtttgcataccctaatgaatat
ttaaaagagcgttatcgtttttcaaaagattcgttagtttatttaacacgtcttttaaaa
ctgcatatcgcaaatgtgacaaagnngttcgcgcttagcacagaaaacattctgtgcata
gcacttaggttttttgcgtctggccattttttgtacagtgtgggcgattcggagcacgtg
ggaaaggcaactgtgtgtagagccgttcgtacagtatgtctggcactcaaacagttctta
cccacgtttgtacagttccctggccataaacctctgcttgttattaaagacgaattccac
agagtggcagggtttccaaatgtaattgggtgcattgatggcactcacattcctattaaa
gctccaccaataaatgagggagactgtgttaataggaaatctattcatagcatcaatgtg
caggtaatatgtgaggcaacccaagtcattaccaatgtcgaggcaaaatggccaggatct
atgcattatgccagaattttccgcgagtcatcattatgccagacatttcagcagggacag
tacaatggttacttgctgggggacagaggatacccttgtctgccctatttaatgacaccc
taccctgaacctgagcctggaccacagacacggtttaacctggctctcagccgaacacgg
gccaaggtggagatgacgatagggatcctcaaatctcggtttcagtgtctgcgtgggctc
cgggttagtccagagagggcatgcgacattatagtggcttgtgttgtgcttcacaatatt
gccactataagaggagagagacaccctccctgtattgaggaagatggcccagaggaacac
ctacagattttggaggccaacagagacggaagacttttgagagacaggatctgtcaaaat
tacttttattaa
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