Silurus meridionalis (southern catfish): 124392712
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Entry
124392712 CDS
T08004
Symbol
atf4a
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-4
KO
K04374
cyclic AMP-dependent transcription factor ATF-4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04137
Mitophagy - animal
smeo04141
Protein processing in endoplasmic reticulum
smeo04156
Integrated stress response (ISR) signaling pathway
smeo04210
Apoptosis
smeo04261
Adrenergic signaling in cardiomyocytes
smeo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124392712 (atf4a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124392712 (atf4a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124392712 (atf4a)
09143 Cell growth and death
04210 Apoptosis
124392712 (atf4a)
04156 Integrated stress response (ISR) signaling pathway
124392712 (atf4a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
124392712 (atf4a)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124392712 (atf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124392712 (atf4a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, CRE-BP/ATF
124392712 (atf4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
BNI5_helical
NOCA1_mid
Nop53
KIF21A
Motif
Other DBs
NCBI-GeneID:
124392712
NCBI-ProteinID:
XP_046715842
LinkDB
All DBs
Position
1:4761990..4764847
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AA seq
401 aa
AA seq
DB search
MTLSSQMCMEDMGTLFLESSTLMADPFGPLLDEDEERALSEGSSSPLSSSSYSDSYSSSP
FSSPSVLDPLGCKGGCDVPLPWLSASEQINAHIGAEQREGDAFSGMDWMTEKIDLSDFDL
DSLIGSCDLDEPPSSPEELLASLESQMDLDLPLLPFPSASTPVSEVLNLPSFPLDLPIES
DVHPEPVSVEIKSEPVSPSPSPVFTLELGSEVDISISELEKTVPKAGVDNQAPSIVLSLS
PAHIVVVLTTKEEPSNPNNSSDQSDSGFESVSGSPPRVQSPVPSPKSAGVSRTKPYSKTD
PDAVMNVGKVKTVSGTTKQTKPVEKKLKKMEQNKTAATRYRQKKRVEQENLTVECAELEK
RNRELEDKADSISREIQYLKDLIEEVRSAKNRKNKSKATSS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgacactgagctcacagatgtgcatggaagatatggggaccctgttcttggagtcctcg
actctgatggctgacccctttgggccccttctggacgaagatgaagagagagctctttct
gaggggtcttcgtcgcccctctcctcctcttcatattccgattcttactcttcctccccg
ttttcttccccctctgtcctcgatcctctaggatgtaaaggcgggtgtgatgtgccgctc
ccctggctgtctgccagtgagcagatcaatgctcacattggggcagaacagagagaaggg
gatgcattttcaggcatggactggatgactgagaagattgacctcagtgattttgacctg
gactcgcttatcgggtcctgcgatttggatgagcctcctagctctccagaagagctcttg
gcatccctggagtcccaaatggatctggacctgcctctgctcccattcccatcagcatcc
acacctgtttcagaagtgctcaacctgccttctttccctctagatctgcccattgagtca
gatgtgcaccctgagcctgtttctgttgaaatcaaatctgagccagtctctccatctcca
tctcctgtatttactctagagttgggcagtgaagtagacatctccatctcggagctggag
aaaacggtacccaaggccggtgttgataaccaggccccaagtattgtgctttccctctcc
cctgcccacatagtggtggttctcactaccaaagaagagccaagcaatccaaacaattct
tcagaccaatctgacagtggttttgaatcggtatccggttctcctcctcgtgtccagagt
cctgttccatctcccaaatctgcaggtgtttccagaaccaagccctattctaaaactgat
cccgatgcagtcatgaatgttggcaaagtaaagactgtatcaggaacgaccaagcagaca
aaaccagtagagaagaaattgaagaaaatggagcagaataagacggcagctacccgctac
aggcagaagaaacgggtggagcaggagaacttgactgttgagtgtgccgagttggagaag
agaaaccgagagctggaagacaaggcagactcgatcagccgggagatccagtatctaaag
gatctcattgaggaagtccggtcagcaaagaaccgaaaaaacaagtccaaggcaacctct
tcataa
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