Silurus meridionalis (southern catfish): 124392722
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Entry
124392722 CDS
T08004
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124392722 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124392722 (lrrn1)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
ig
LRR_1
LRR_EndoS
Ig_2
LRR_Zer-1
V-set
fn3
Pur_ac_phosph_N
LRRCT
Ig_C17orf99
LRR_NXF1-5
Sp38
LRRNT
Motif
Other DBs
NCBI-GeneID:
124392722
NCBI-ProteinID:
XP_046715852
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All DBs
Position
1:12388460..12401023
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AA seq
715 aa
AA seq
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MAIGTAFCVAQPCFILLLAVLTFSAVESTECPQLCVCEIRPWFTPQSTYREAITVDCNDL
RLTRIPGNLSSDTQVLLLQSNYIARTTEELEQLLNLTELDLSQNNFTNIRDIGLTNMSQL
TTLHLEENQIVEMPDFCLQDLTNLQELYINHNQISSIAPNAFAGLSSLLRLHLNSNKLKA
INSRWFDSTPNLEILMIGENPVVGILDLNFKPLVNLRSLVLAGMELTDIPGNAFVGLDNL
ESLSFYDNRLVNVPQNALQKLPNLKFLDLNKNPVHKIQEGDFKNMLRLKELGINNMGELV
SIDRFALDNLPELTKLEATNNPKLSYISRLAFRDVPSLESLMLNNNALNSVYLATVESLP
NLREISIHSNPLRCDCVIQWMSSNKTTIRFMEPLSMYCAMPPEVRGQRIREALSHESAEQ
CLPMISHDTFPNHLNLDIGMAVDLDCRAMAEPEPEIYWVTPLGNKVMMDTVSDKYRLNSA
GTLHISNIQADDSGRYTCVAQNTEGADTRVTAIRVNGTLLDNTQLMKMYVKQTESHSILV
SWKVNSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCLSVSNI
HQQTQKSCVNVTTKHSTFAVEISDQGTNTALAAVMGTILAIISLVFISVYIAKRWKRKNY
HHSLKKYMQKTSSIPLNELYPPLINLWDVDTEKDKDGSLEPKPSQVDTTRSYYMW
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggctatagggactgcattctgtgttgctcagccttgctttattttgctgttggcagta
cttacattctctgctgttgaatctacagagtgtcctcagctatgcgtatgtgaaatccgg
ccatggttcacaccccagtctacctacagggaagcgatcactgtagactgcaatgaccta
cgtcttacacgtatccctggaaatctgtcaagtgacacacaggtgttgttgttgcagagt
aactatattgcaaggaccactgaggaactggagcagttgctaaacttgactgaactggat
ctctcccagaacaactttaccaacattcgtgatataggcttgaccaacatgtcccagctc
accacactccatctggaggaaaaccaaattgttgagatgcctgatttctgccttcaggac
cttacaaaccttcaggagctttatataaaccacaatcaaattagttccattgcacctaat
gcatttgctgggttgagcagcttgctaaggctacacctgaactcaaacaaactcaaagct
attaatagccgctggtttgattcaacacctaacctggagatccttatgattggagaaaat
cctgtagttggtattctggatttgaattttaaacctcttgttaaccttagaagtttagta
ttagcagggatggaacttactgatatacctggcaatgcttttgtaggacttgacaatctt
gagagcctctctttctatgataacagacttgtgaatgttcctcaaaatgcactccagaaa
ctaccaaacctgaagtttttggatttgaacaaaaaccctgtacacaaaatccaggagggg
gactttaaaaacatgctaaggcttaaagaacttggcattaataatatgggggagcttgta
tccattgaccgttttgcactggacaatctgccagaactgaccaaacttgaagccaccaat
aaccccaagctctcatacattagccgattagcattccgtgatgttccatctcttgagagt
ctaatgctcaacaacaacgctctaaactcagtttacttggcaacagtagaatctttacca
aacctgcgggagatcagcattcacagcaacccactgcggtgtgattgtgttattcagtgg
atgagttcaaataagacaaccataagatttatggaacctctatcaatgtactgtgcaatg
ccacctgaggtcagaggccagcgaataagagaggcactttcacatgaatctgctgaacaa
tgtttgccaatgatatcccacgatacgttccctaatcatcttaacctggatattggcatg
gccgtagaccttgattgtcgtgcaatggcagagcctgaaccagagatatactgggtaaca
ccattaggcaacaaggtcatgatggatactgtgtctgataagtaccgtctgaacagtgct
ggaacactgcatatatcaaacattcaggctgatgattctggtcgctacacatgtgttgct
cagaatacagaaggtgctgacactagggtgactgcgatccgagtcaatggtactctcctg
gacaacacacagcttatgaaaatgtatgtgaaacagaccgagtcccactcaatactcgtc
tcctggaaggtaaactccaatgtaatgacttctaatctcaagtggtcttcagccaccatg
aagatcgacaaccctcatatcacctacacagccagggtccctgtagatgtccatgagtac
aatctgacccaccttcagccagctactgaatatgaggtctgtctctcagtgtccaatatt
caccaacagactcaaaagtcttgtgtaaatgtcacaactaaacattcaacatttgctgtg
gaaatatctgaccagggcaccaacacagctcttgctgctgtcatgggtacaatcctcgct
atcatcagcctggtgttcatctctgtctacattgccaagagatggaaaaggaagaactat
caccactctctcaaaaaatacatgcagaaaacctcttctattccccttaacgagctatac
cctcccctcatcaatctgtgggatgtagacactgaaaaggacaaagatggctccctggag
ccaaagccaagccaggttgacacaacaagaagctactacatgtggtga
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