Silurus meridionalis (southern catfish): 124392735
Help
Entry
124392735 CDS
T08004
Symbol
atf6b
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 beta isoform X1
KO
K09049
cyclic AMP-dependent transcription factor ATF-6 beta
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04141
Protein processing in endoplasmic reticulum
smeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124392735 (atf6b)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124392735 (atf6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124392735 (atf6b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
124392735 (atf6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
Rod_CreS
YabA
FANCAA
NCTSP_N
CCPG1_N
Motif
Other DBs
NCBI-GeneID:
124392735
NCBI-ProteinID:
XP_046715867
LinkDB
All DBs
Position
10:26691973..26704868
Genome browser
AA seq
657 aa
AA seq
DB search
MAAAELLSDLDSRFFADNLLTSEDWDACLYQCESMEEGEERLKYDPLLDNDLVLTLDPDN
PMAPWKHLENKLLEGDMTVMKDEMTIAQPLPVDMLFQVKAEPPSPSSSPASDCSLLSLPE
AQFQVKGENPPTPPYMYGDVLSPPVGAMEVTVATTVPPPHQATSTLPVPTVAQTTVNTGS
ILSSKPVLQPRPVCVAAKTLILQGTPPVVLSPSVCLGSAPAIVKMEPVSPSMHCTSPTAP
PTTKPIIPASSLPGSNCSDIDMKVLKRQQRMIKNRESACQSRKKKKEYVQNLEAQLREAQ
QENEHLRRENQALRIRLASKEGAESGSSKRAVCVMVLLLFITFSFAPVSITDRKLPSALE
EGEELHPGRRLLVYDPGQVVDDRVVEDRLDSEEDTGEDSWRRGEMDRDNSDTFHFRNVSS
VFSEVKDLVLQDIDRLFSSSDCRQFNRSESLRLADELRGWVHRHQINRKKSNRKPKIAQK
AKIAQQKAQHRKTNFSRYLPIETHRSIESQLQLLPGPEVSYSDFLDAIDRREDTFYVVSF
RRDHLLLPAISHNKTTRPKMSLVMPAMAVNESVYNSSKGGYELMMQVDCEVMDTRIIPIK
SSVVPPSLRDTPPNPPSHHNHHGNHTRQTSGGGAAATRQPLPVRRRGAELLITQSGS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgaactgctgtctgatctggacagtcgctttttcgcggataatcttctg
acgagtgaagactgggatgcctgtctgtatcagtgtgagagcatggaggagggtgaggag
cgcctgaaatatgacccactgctcgacaatgacctggtgctgacccttgacccagacaac
cccatggcaccttggaaacacctggagaacaaactgctagaaggtgacatgacagttatg
aaagacgagatgacaatagcgcagcctctccctgtcgacatgctgttccaagtgaaggcc
gagcctccgtctccttcatcctctccagcctccgactgctctttattgtccttacctgaa
gctcagtttcaggtgaaaggtgagaatcctcccacgcctccttacatgtacggagatgtc
ctctcacccccggtgggagccatggaagttaccgtggcaaccacagtcccgccccctcac
caagctacatctacacttcctgttcccactgtagcacagaccacggtcaacactggatct
attctcagcagtaaacctgtgctccagccccggccagtgtgtgtggccgctaaaactctg
atcctgcagggaacaccaccagtggttctgtccccatcggtgtgtttgggttctgctcca
gccatcgttaaaatggagcccgtgtctcccagcatgcactgcaccagccctacggccccg
cctaccaccaagcccatcatcccagcatcctctctgcctggaagcaactgcagcgacatc
gatatgaaggtgctgaagcgtcagcagaggatgataaagaaccgagagtccgcatgtcag
agccgcaagaagaagaaggagtacgtacagaacctggaggctcagctaagagaggcacag
caggagaacgaacacctgcgccgggagaaccaggccctgaggatcagactcgcctccaaa
gagggtgcagaatcaggcagcagtaagagagcagtgtgtgtgatggtcctcctgctcttc
atcaccttcagcttcgctccagtcagcatcaccgacaggaagttaccgtctgcgctggag
gaaggggaggagcttcatccggggagacgcctgctggtgtacgacccaggtcaggtggtg
gacgacagagtggtggaggacaggctggacagcgaggaggacacgggagaggacagctgg
aggagaggagagatggacagagacaactctgacacctttcacttcaggaacgtcagcagt
gtgtttagtgaggtgaaggatctcgtcctgcaggacatcgaccgcctcttctcctcctcc
gactgcagacagttcaatcgctccgagtctctcaggttggcagatgagctgcgtggttgg
gttcatcgccatcagattaaccggaagaagtcgaaccgtaaacccaagatcgctcagaag
gcaaaaatagcacagcagaaagctcaacaccggaagaccaacttctcacgctatctcccc
atcgagacgcaccgatctattgagagtcagctacagcttttacccggacctgaggtgagc
tacagcgacttcctggatgccatcgatcggcgtgaggacacgttttacgtcgtctccttc
agacgggatcatctgcttcttcctgccatcagtcacaacaaaactacacgccccaaaatg
tcccttgttatgcctgccatggccgtcaacgagtcggtctataactcatctaagggtgga
tacgagctcatgatgcaggtggactgtgaggtcatggacaccagaatcatccccatcaaa
tcttctgtggtcccgccctcgctcagagacacaccccccaacccgccctcacaccacaat
caccatggcaaccacacacggcaaacgagcgggggcggggcggcggcaaccaggcagccc
ctgccagtcaggaggaggggggcggagcttttaatcacacaatcagggtcctaa
DBGET
integrated database retrieval system
