Silurus meridionalis (southern catfish): 124392740
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Entry
124392740 CDS
T08004
Symbol
mybpc1
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124392740 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124392740 (mybpc1)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124392740 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
Ig_DSCAM-DSCAML_C
V-set
Ig_CYK3_C
PHD_4
Motif
Other DBs
NCBI-GeneID:
124392740
NCBI-ProteinID:
XP_046715879
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All DBs
Position
10:3088817..3133649
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AA seq
1289 aa
AA seq
DB search
MPEPTKKENGQPEGTGEAVLPAEISLEVSPPEAAAVVKAPEHELTLPEREPITPAAVEPQ
PILAEVAEQQPIVSEISQPQPIVTEPVVHEQEKPESTRPVKTVQLCELEEASELPPSTDN
DEVTASSPSPPPPSEDGSTHKNLSVDLSNDSTPASSRERKDSVWSLGDGPLPEDIEKQVE
NPPLSTLLIEKPQGGSIQVGGDITFIAKVEAKDLLRKPTVKWFKGKWMDLASKTGKHLQL
KESFDRITKIHTFEMHIIKAKENYGGNYRCEVTYKDKFDSCSFDLEVKDVPETQSIDIRS
AFKRSSEGQEDAGELDFSGLLKHRNTREHKQEEVPEVDVWEILKNARPDEYEKIAFMYGI
TDLRGLLRRLKKTKKVEKKSEAFAKRLDPAYQVDKGGKVRLIVDLADPTVELKWYKNGQE
IRPTPNNRKFIFEHKGTQRIMVINNCQLNDDAAYSVVAGDEKCTTELFVKVLPVNIVKKL
EPVKTTVNERIELECEVSEEGAQVKWMKNGVEVPTGVRSRYRVKSEGTKHWLIIDDATKE
DTGTYSIMATGGTSEAHVQVDLKPLKILQDLQDMTIRLGQPLKLQCEILPINVPGRWYRN
GQLIQSSDRINIIHRAKTHRLEVESSTLHDAGDYTFVPEGYTQSLCAKVHIIDPPKVHLD
ALNAPDNTITIVAGNKLRLEVPISGEPVPRVVWMKGERVILETGTRVRAETFSDHTCLTI
EVTEREDSGNYKIVLQNEAGEDTGSVRIKVVDIPDPPGPPLVPAVGGDWCTMTWDPPIYD
GGSPILGYFIERKKKQSSRWMRLNFDLCKETTFEPKKMIEGVPYEVRIFAVNTIGVSKPS
DPSKPFIPLAVTSEPTMLVVDEVTDTTVTMKWRPPETIGAAGLDGYQVEYCIEGTDDWIL
ANKELTEKTKYTLTGLVPESKILIRVKAINAAGASLPRTTQHSILVKEVVEPPKIRVPRH
LKQTYMRKVGEQVNIVVPFMGKPRPKITWLKDDEAIEQTQVNIRNSDCDSIIFIRKAERK
HSGKYKMAVQVEKLVDTAILDIQIVDLPGPPQCVRIEEVWGENVALDWTPPKDSGNAPIT
GYTIQKADKKTMEWYTCVEHYHRTCITISELVVGNEYYFRIFSENMVGLSENATITKDTA
VIVKEGMNMKNPEYICYDFAEAPKFTQPLINTFAVAGYNASLNCSVRANPRPKVIWMKNK
IPIIDDPRYRMFSSQGVCTLEIRKPSPFDGAMYTCKAINDLGEAQVECKLEVKGGFTFLE
LMKRGVPLHLIDNFMNERKSPESEKKGSD
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcccacaaagaaagaaaatggtcagcctgaaggcactggggaggctgtgctt
ccggctgagatttccctcgaggtgtctccaccagaggctgcagcagtggtcaaagcccca
gagcacgaactgactctaccagagcgagagccaataacacctgcagctgtagagccacag
ccaatattggctgaggttgctgagcaacagccaatagtgagtgagatctcacagccacag
ccaatagtgacagagcctgtagtgcatgaacaggagaagccagagtccacacgacccgtt
aagacggtgcaattatgtgagcttgaggaggcttctgaactccctccatccacagataac
gatgaagtgactgccagcagtccgtctcctccacccccatcagaggacggcagtacacac
aagaacctttcagttgatctatctaatgatagcacccctgcgtcatccagggagagaaaa
gactcagtgtggtccctgggagatggaccacttcctgaggatattgagaaacaggtggaa
aatcctcctctctctaccttacttattgagaaaccacagggtggctccatccaagtaggt
ggagacattacctttattgcaaaggtagaggccaaggatttgctccgtaagccaacagtc
aagtggtttaaagggaaatggatggatctggcaagcaagactggaaaacacctacagctg
aaggaaagtttcgaccgtatcacgaagattcacacgtttgagatgcatatcattaaggcc
aaagagaactacggtggcaattacagatgtgaagtgacttataaggacaaatttgacagc
tgctcttttgatctcgaggttaaagatgttccagagactcagagtattgacattcgctca
gctttcaaaagaagcagtgaaggccaggaggatgcaggagagcttgactttagtgggctt
cttaaacatagaaacaccagagagcacaaacaggaggaggtacctgaggtggatgtgtgg
gagatcctgaaaaacgcccgaccagatgagtacgagaagattgcctttatgtacgggatc
acagacctccgcggtctgctgagaaggctgaagaagacgaaaaaagtggagaaaaagagt
gaagcgtttgccaagaggttggatcctgcctaccaggtggacaaaggagggaaggtacga
ttaatcgtggacctggctgacccaacagttgagctgaaatggtacaagaatggccaagag
attcgtcccactccaaataataggaagtttatttttgagcacaagggcactcagaggatc
atggtgattaacaactgtcagctgaatgacgatgctgcctattcagtggtagctggggat
gagaaatgtactactgaactgtttgtgaaagtgttaccggtgaacatcgttaaaaagctg
gagccggtgaagactacggttaatgaacgaatcgagctcgagtgtgaagtgtcagaagaa
ggagcacaagtgaaatggatgaagaatggggtggaggttcctactggggtgcgttcaaga
tatcgtgtaaagagtgaaggcacaaagcattggttgattatagatgatgccacaaaggag
gacacaggaacctattccatcatggcaactgggggcaccagtgaggctcatgtccaagtg
gacttgaagccactgaagattctacaagatttacaagacatgacgatccgtttagggcag
cctctcaagctccagtgtgagatcttacctataaatgttcctgggcgctggtatagaaat
ggccaacttatccaatccagcgatcgcataaacatcatccacagagccaagacccatagg
ctggaagttgagagcagcaccctgcacgatgctggagattatacttttgtgcctgaaggg
tacacacaaagcctttgtgccaaagtccacataatagatccccctaaagtgcatctggat
gctcttaatgctccggataacactatcaccattgtggctggtaacaagctgcgtttggag
gtccctataagcggcgagcctgttcccagggtggtgtggatgaaaggagagcgggtcatt
cttgagacagggactcgagttcgtgcagagacattttctgaccacacctgcctcactatt
gaagtcactgagcgagaggacagtggcaactacaagattgtcctgcagaatgaagcagga
gaggacacaggcagtgtcaggattaaggttgtagatattcctgatcctcctggacctcct
ttggtccctgcagttggtggtgactggtgtacaatgacctgggatcctcctatttatgat
ggtggttctccaatcctgggatacttcattgagaggaagaagaagcagagctccagatgg
atgcgtctgaacttcgacctctgcaaagagaccacgttcgagcctaagaagatgatcgag
ggggtgccatacgaggtgcggatttttgctgttaacacgatcggggtttccaagccgagt
gatccctccaaaccctttattccccttgctgtcactagtgagcccaccatgctggtggtt
gatgaggtgacagacacgaccgtgacgatgaagtggcgtcctccggaaaccatcggtgcc
gccgggttagatggctaccaagtggagtattgcatcgaaggaactgatgactggatcctt
gccaataaggaactgactgagaaaaccaaatacaccctcacaggccttgtaccagaatcc
aagatccttatccgagtgaaggcgattaacgcagcgggtgccagtttaccacgcaccact
cagcactcgatcctagtcaaagaggtcgttgagcccccaaagatccgtgtccctcgccac
ttgaagcagacgtacatgcgtaaggtcggagaacaagttaacatcgtggtcccgttcatg
ggcaaaccccgaccaaagatcacctggctgaaggacgatgaggctatcgaacaaacgcag
gtcaacatccgcaactcggactgcgacagcatcatcttcatccgcaaagctgaacgcaag
cactctgggaaatataagatggctgtccaggtggaaaaacttgtcgataccgccatcctg
gacatccagatcgtggaccttcctggtcctccacaatgtgttcgaattgaggaggtctgg
ggggagaatgttgctctggactggacaccacccaaggatagcggcaatgcgcccataaca
ggatacaccattcagaaggcggataaaaagaccatggagtggtacacctgtgtggagcac
taccaccgcacatgtatcactatcagcgagctggtggtgggcaacgagtactacttcagg
atcttttcggagaatatggtgggcctgagcgagaacgccacaatcacgaaagacaccgca
gtcatcgtgaaggagggcatgaacatgaagaacccagagtacatctgctacgacttcgca
gaggcacccaagttcacccagcccctcattaacacctttgcggtcgctgggtacaacgcg
tctctgaactgcagtgtccgggccaacccccggcccaaagtgatctggatgaagaataag
atccccatcatcgatgacccacgctaccgcatgttcagcagccaaggtgtgtgcacgttg
gagatccggaagcccagcccgttcgacggagccatgtacacctgcaaggctatcaatgac
ctcggcgaggcccaggtggagtgcaaactggaggtgaaaggaggctttacattcttagag
ctgatgaagcgtggagttcctttgcatcttattgataatttcatgaatgagagaaagtcg
ccggagtcggagaagaagggatctgactga
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