Silurus meridionalis (southern catfish): 124392762
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Entry
124392762 CDS
T08004
Symbol
myo5ab
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Va
KO
K10357
myosin V
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124392762 (myo5ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124392762 (myo5ab)
04131 Membrane trafficking [BR:
smeo04131
]
124392762 (myo5ab)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124392762 (myo5ab)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124392762 (myo5ab)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
124392762 (myo5ab)
mRNA cycle factors
P-body specific factors
124392762 (myo5ab)
Membrane trafficking [BR:
smeo04131
]
Others
Actin-binding proteins
Myosins
124392762 (myo5ab)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
124392762 (myo5ab)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
124392762 (myo5ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Methyltr_RsmB-F
Myosin_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
124392762
NCBI-ProteinID:
XP_046715911
LinkDB
All DBs
Position
10:6005844..6040372
Genome browser
AA seq
1787 aa
AA seq
DB search
METPALYNKYARVWIPDPQEVWRSAELTRDYKPGDSALQLQLDDGRELEYKLEPKSSTPP
PLRNPDILVGENDLTALSYLHEPAVLHNLRIRFVDSKLIYTYCGIILVAINPYETLPIYG
ADIINAYSGKNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYSMRYF
ATVSGSSTERSVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFNRNYHITGANMR
TYLLEKSRVVFQAIEERNYHIFYQLCASAHLPEFTALQLGSATKFLYTNQGRSPVIDQVD
DVQEMQVTRQAFSLLGINESQQLDLFQILAAILQLGNVEMMGKGSGNCSVSVENSHLAIF
CDLLMVSPEAMVHSLCHKKLKTATETFNKPLTKMEAVNGRDALAKHIYAKLFTWIVGQIN
KALHSSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNTHVFKLEQEEYLKE
KIPWTLIDFYDNKPCINLIEARMGVLDLLDEECMMPKGSDDSWAQKLYNTHLKKSDHFDK
PRMSNKAFIISHFADRVEYRCEGFLEKNKDTVNEEQINVLKSSKFALLLELFHEEETAQS
KVASSRTKITKVGQSFREHKKSVGLQFRNSLQLLMDTLNATTPHYVRCIKPNDQKTPFVM
NPIRAVQQLRACGVLETIRISAAGFPSRWTYQEFFTRYRVLMKQKHLLSDMKSTCQNVLA
QLIADPDKYQFGRTKIFFRAGQVAYLEKLRADKLRVACVQIQKTIRCWVARKKYLRLRTA
AVTVQRYARGHQARALCKSLRKTKAAVVIQKYLRRYAARRLYKQKQAAAVLLQRLLRGHR
ARLQYRKVRYEMKVVVVQRWVRGWLARLHYRRTVQAVVCLQCCVRRTLARRELKRLKIEA
RSVERYKTLNVGMEKKIMQLQMKVDEQHKENRELSKRLCAVESWSMAEMGKLRTQLETLH
RVEEEARSFSGQVSALEEELGLTQRELEKNRLMLAELKETNCLLKCEKDELNGLIQEQSQ
QITDQLREAHKEYTEHLQMELNDERTRYQNLLTEHIKLEAQYADLKSEQVAATYATKQGP
LRKDSVFSSNESEYTHYSEFTESEASIQVQEEEVKGSVDVSLLLKLQKRVAELEQVKMNL
QREWDSREEQLQQEHATVHIHXKTLGAERDYEAQKRQELESANKRLKKDLNDLRVSVSVR
KGSGLAQAYNVLLEQLSSATEELEMRKEEVLLLRTQLVNLEGFNYKEAAVESNSSNTSRS
PTLDLHKLNEDGELWMAYEGLKETNRVLESQLQAERQSHTEEMEALKTELHVLKEERDQQ
KLLLSNTLQLPQDGRVNAAFQNEISRLTRHNLELMEQMDKQDKTTRKLKKQLKMRKMEEL
DNTSLDQPCTESGVTEDLQEVNIPRKERHCQGMLEYKKEDEAKLFRALITDLKPRGVAVS
LIPGLPAYILFMCLRHVDYTNDDQRVRTLLNNSISSIKNVLKKRSCDFDTLSFWLANTCR
FLHCLKQYSGEEVYAKHNTPQQNKQCLLNFDLTDYRQVLSDLVIQIYQQLIKCMEDVLQP
MIVAAMLEQDTIPGVLGIKPTGLRKRTSSSFTLECILRQLDSFHSTLLQHGNDADLIRQV
LKQQFYVICATTLNNLLLRKDMCSWSKGLQIRYNVSQLEEWLMDKRVQGGGVRETLEPLI
QAAQLLQIKKKSQEDAEAIAMMCTALTATQIEKILNLYTPVNEFEERVSASFMNTVHALL
KDRQESPNLLMDSKLLFPFSFPFNPSLVPLESLQIPKSLNLSFLTSL
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaccggcgctctacaacaagtatgcccgagtttggatcccggaccctcaggag
gtctggagatctgcagaactgaccagagactacaaacctggagatagtgctcttcagctg
cagcttgatgatggcagggagttggagtataaattagaacccaaaagcagcactccgcct
ccccttcgtaacccagacatcctggtgggcgagaacgacctcacggctctgagttacctg
cacgaacctgccgtgctgcacaacctgcgcatcagattcgtcgactcgaagcttatctac
acctactgtggaatcatcctggtggctatcaatccctatgagacgctgccaatctatggt
gcagacatcatcaatgcatacagtgggaagaacatgggggacatggacccacacattttt
gcagttgctgaagaggcctacaaacagatggctagagatgagaggaatcaatccattata
gtgagcggagagtctggagcaggaaagaccgtgtcagctaaatattccatgcgttacttt
gccacagtcagcggctcttccacggagaggagtgtggaggaaaaagtgctggcatccagc
cctataatggaggcaattggaaatgcaaaaacaaccaggaatgacaacagcagtcgtttt
gggaagtacattgagattggatttaataggaattaccacatcacaggggctaacatgagg
acatacctgctcgagaagtcccgtgttgtgtttcaggcaattgaagagcgcaactatcat
atcttctaccagttgtgcgcctctgcccatttacctgaattcacagctctgcaattaggc
agtgcaactaagtttctctacactaatcagggcagaagccctgtcatagaccaagtggat
gacgttcaggaaatgcaagtcactcggcaggctttttcacttctgggtattaatgaaagt
cagcaattggatttgtttcagatcctggctgccattcttcagctgggaaatgtagagatg
atgggcaaaggctcaggaaactgcagtgtctcagtggaaaatagtcacctggctatattc
tgtgatctgctaatggtgtctcctgaggccatggtccattcgttgtgtcataaaaaactg
aagaccgccacagaaaccttcaataagcctctgaccaaaatggaggcggtaaacggccgt
gatgccttggctaaacacatttatgccaagctttttacatggatagttggtcagatcaat
aaggctctgcattcatctagcaagcagcactcattcattggagtgctagacatctatggg
tttgagacgtttgaaataaacagctttgagcagttttgtattaactacgctaatgagaaa
ctccaacagcagtttaacacgcatgtgttcaaactggagcaagaagaatacttaaaagag
aagattccatggactctgattgatttctatgacaataagccatgtattaacctgattgag
gccagaatgggagtgttggatctgcttgatgaagagtgcatgatgccaaagggatcagat
gattcatgggcacaaaagctctataatacccaccttaagaagagtgatcatttcgacaaa
ccacggatgtccaacaaggccttcatcatcagtcattttgctgacagggtggagtatcga
tgtgaagggtttctggagaaaaacaaagacacagtaaatgaggaacagataaatgtcctg
aaatcgagtaagtttgctttgcttttggagctctttcatgaagaggaaacagctcagagc
aaagttgcttcaagtcgaacaaagatcacgaaagtgggccagtcttttagagaacacaag
aaatctgttgggctacagtttcgaaactcgttgcagttgctaatggacactttaaatgcc
acaactcctcattatgtacgctgcataaagcccaatgaccagaaaactccttttgtaatg
aaccccattagggcagtgcagcagttgagggcatgtggcgtactggagactatacgcatt
tctgctgcaggctttccatccaggtggacttatcaggagtttttcactcggtaccgagtt
ctgatgaagcaaaagcacctgctgtcagacatgaagtcaacctgccagaatgttcttgca
cagctgatagcggacccagacaagtaccagtttggaagaactaagatcttcttccgggca
ggccaggtggcatatttggagaaactgagggccgataaactgcgtgtagcttgcgtccag
attcaaaagaccatccgttgctgggtcgcccggaagaaatacctgcgtctgcgcacagct
gctgtcaccgtgcagagatacgcacgtggacaccaggctcgggccttgtgtaagtccttg
aggaagaccaaggcagctgtggtcattcagaagtacctgcgaaggtatgcagccagacga
ctttataagcagaaacaagcagcagcagtgctccttcaacgcctgcttcgtggccacaga
gccagactgcagtatagaaaggttcggtatgagatgaaggtggtggtggtgcagcgctgg
gtgcgtggctggctagcacggctgcactacagacgcactgtgcaggctgtggtgtgtctg
cagtgctgtgtgcggcgaacgctggctcgaagagagctcaagagactcaagattgaggca
cgttcagtcgagcgctacaaaacactcaatgtagggatggaaaaaaagataatgcagcta
cagatgaaagtggatgagcagcataaagagaacagagagctgtcaaagcgcttgtgtgca
gttgaaagctggagcatggcagagatgggtaaattacgcacccagctagaaacactgcac
agggtggaggaagaagctcgcagttttagtggtcaggtgtctgctctggaagaggagctg
ggattgactcagcgtgaactggaaaaaaacagactgatgcttgctgagctgaaagagaca
aactgtctgctgaagtgtgagaaggatgagctaaacggactgatccaggaacagagccaa
cagattactgatcagttgcgagaagcccacaaggaatacaccgagcacctgcagatggag
cttaatgatgagcgtactcgctaccaaaaccttctaactgaacacatcaaactggaggct
cagtatgctgatttgaaatcagagcaagtggctgcaacatatgccaccaaacaaggtcca
ttgagaaaagactctgtttttagcagcaatgaatccgaatacactcattactcggagttt
acagaatcagaggccagcatacaggttcaagaggaggaggtaaagggaagtgtggatgtt
tctctcctgctgaagctgcagaagcgagttgctgagctggagcaggtgaagatgaacctg
cagagagagtgggattccagagaggagcagctccaacaggaacatgccacggtacacata
cactagaaaacgttaggagctgagagagactacgaggcccagaagcgacaggagcttgag
tcagcgaataagagactgaagaaggatctgaatgatctgcgtgtgtctgtcagtgtgcgg
aagggctcaggattggcacaagcttataatgtgctcttggagcagctgagttctgctacc
gaggaactggaaatgcgcaaagaggaagtgcttttgctgcgcactcagctggtcaatcta
gagggcttcaattataaggaagcagcagtggaaagtaactcaagtaacactagcagatcc
cccactttagatttacataagctgaatgaggatggagagctgtggatggcatacgaggga
ctcaaagaaactaacagagtgctggagtctcagctgcaagctgaaagacaaagtcataca
gaggagatggaagccctgaaaacagagttgcatgttttgaaagaggagcgagaccagcag
aagcttcttctcagcaatacactacaactgcctcaagatggtcgtgttaacgcagctttc
caaaacgagatcagccgccttacccgacataatctagaactaatggaacaaatggacaag
caggacaagaccacacgcaagctgaagaaacagctgaagatgaggaagatggaggagctg
gacaatacctctttggatcagccttgtacagaaagcggagtgaccgaggatctacaagag
gtgaacatcccgcgcaaagaacggcactgtcagggcatgctggagtacaaaaaggaagat
gaagcgaagctatttagggcgcttatcacagatctaaagcccagaggggttgcagtgagt
ctgatcccaggcctaccagcttacattctcttcatgtgtctccgccatgttgactacact
aacgatgaccagagagtccgcacgctgctcaacaactcgatcagcagcatcaagaatgtt
ctaaagaaacgaagctgcgattttgatacattgtcattctggttggccaatacgtgtcgc
ttcctgcactgcctgaaacagtatagcggggaagaggtctacgctaaacacaacactccc
cagcagaacaaacagtgtctgctgaactttgacctgactgattacaggcaggttttgagt
gacttggtcatccagatttaccagcagctcatcaaatgcatggaggatgtccttcagcct
atgattgttgcagccatgctggagcaggacaccatccctggtgtgttggggatcaaaccg
accgggttaaggaagcgtacctcgagctccttcacgctggagtgcattttgagacagctc
gattcattccactccactctgctccagcacggcaacgacgccgatcttatcagacaagtg
ctcaaacaacagttttacgtcatctgtgccaccacactgaacaacctgctcctgcgcaag
gacatgtgctcgtggagcaaagggctgcagatcagatataatgtgagtcagctggaggag
tggctgatggataagagagttcagggcggtggtgtccgagaaacgctggagcctctgatc
caggctgctcagctgcttcagatcaagaaaaagagtcaagaagatgcagaggccatcgcc
atgatgtgcacggcgctcactgccacacagattgaaaagatcctgaacctgtacacacca
gttaatgagtttgaggaaagggtgtctgcatcattcatgaacactgtacacgctttgtta
aaggatcgtcaggaatctcctaacttgctcatggacagcaaacttctcttccccttcagt
tttccctttaatccttcccttgtgcccctcgagagcctccagattcccaaaagcctcaac
cttagctttcttacgagtctctaa
DBGET
integrated database retrieval system
