Silurus meridionalis (southern catfish): 124392860
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Entry
124392860 CDS
T08004
Symbol
nkx2.5
Name
(RefSeq) homeobox protein Nkx-2.5
KO
K09345
homeobox protein Nkx-2.5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124392860 (nkx2.5)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
124392860 (nkx2.5)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
124392860
NCBI-ProteinID:
XP_046716072
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All DBs
Position
10:19035717..19038433
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AA seq
306 aa
AA seq
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MAMFSSQMSSTPFSVRDILNLEQNHEDMVSLEMSLPTSSCMMFKPEPFVDAVNGAALFAP
GDEQEHKGDRSTSVDFSPAFYGKSFLEMDLAKDAKPDDTLDSKERKEKVRSPEQRQKPDE
AERPGQRKRRKPRVLFSQAQVYELERRFKQQKYLSAPERDHLAHVLKLTSTQVKIWFQNR
RYKCKRQRQDQTLEMVGAGPPRRVSVPVLVRDGKRCLGDAAYGTSYNVGINHFPYNAYHS
FGNVNFPSGGNTNYTCNYSASANVQPVQTSPSSGGYVNFGVGDLNNVQAPFQAGGGVSSL
HGIRAW
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttctcgagccaaatgtcttccactcccttctcagtccgggacattttaaac
ctggaacagaaccacgaggacatggtctcgttggaaatgtcgctccccacttcgtcttgc
atgatgttcaaaccggagccgttcgtggacgcggtgaacggagccgcgcttttcgctcct
ggtgacgagcaggagcataaaggtgacaggagcacatctgtggactttagtcctgccttt
tatggaaagagtttcttagaaatggatctagccaaagacgcaaagccagacgacacgctt
gactccaaggaaagaaaagagaaggtgcgctcaccggagcagaggcagaaaccggatgag
gcagagcgccccgggcagcggaagcgtcgaaagccgcgcgtgctgttttcgcaggcgcag
gtgtacgagctcgagcggcgcttcaagcagcagaagtacctctcggcgcccgagcgagat
cacctggcgcacgtgctcaagctgacgtccacgcaggtgaaaatctggttccagaacagg
cgctacaagtgcaagcggcagcgccaggaccagacgctcgagatggtgggcgcgggcccg
ccgaggcgcgtgtctgtgccagtgctcgtgcgcgacggcaagcgctgcctgggagacgcc
gcttacggaacctcgtacaacgtgggcatcaaccacttcccttacaacgcttaccacagc
ttcgggaacgtgaacttcccgagcggcggcaacacgaactacacgtgcaactactcggcg
agcgcaaacgtgcagccggtgcaaacgtcaccgtccagcggcggttacgtgaatttcggc
gttggggatctgaataacgtgcaggcgccgttccaggccggcggaggagtttcctcatta
cacgggattcgggcttggtga
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integrated database retrieval system
