KEGG   Silurus meridionalis (southern catfish): 124392894
Entry
124392894         CDS       T08004                                 
Symbol
caprin2
Name
(RefSeq) LOW QUALITY PROTEIN: caprin-2
  KO
K18744  caprin-2
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124392894 (caprin2)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     124392894 (caprin2)
SSDB
Motif
Pfam: C1q Caprin-1_dimer Caprin-1_C
Other DBs
NCBI-GeneID: 124392894
NCBI-ProteinID: XP_046716109
LinkDB
Position
10:complement(3386317..3397716)
AA seq 946 aa
MRETRTMVQLFPCPASDAVALSESMDERDAELDGSPAPXSPRTLTALQLALNPSETVYHG
YETYIEEGLLCLRHKIRNIEKKKLKLEGYQARLKNGDMLNPDQLEAVGRYEEVIHNLKFA
KELQMTLHALTQDLLKAQRKAVRHEQVQRSESEQRRFSTMLQVQYVLRSLQRHDVRKTFS
TCEQARYLSMQEVEKLLNLATMLACKRDERMSLEDQMEQASFVYMDLLDGKDKPVAGSTY
KSLKEKLLRLVDSGLFDHLPEPEENPKKDEVQKPDSSTSKPSSLNAVSSSTSDVTSRQFS
NRRYVKERDPTPPGQGVNLNVEPPTWKGEFLALKEQEPPDSWDMELTDPPASSKMVLQKP
WKGAAGFIPKSMVTLKPAVETKQKRQRKNKGSHGLKSDVQIKKAVPVEVFNSPSSLAKDP
ALRRQQLDHLMDQITGSFSFIQDSLLDGEATPGNGRTRGLRLSPGSSPLAQTIPTDLLPP
SQNSTPLHGHKCPGDAQSSLANGDQPTDTSDLKLHAEDSLHVTQDKGFTSPPLYCREPCI
SVTHDTKNTRQAGKQPLSNGEIPTPVLAQTFTTPPNRRSLPPTSTASFSSLHSVFSGEVP
MTRSSELKTEESGFLESVCLSYSTASTMSHSTASTQTPPELSLPQDDLQMESAYLSESDI
SASSHVYSSPGPNSAPHFQSSLVQQYYPRSTLRGMTHGARGLFHSSLRSPGASRGGYEVH
RVNIRAPGGGFAAQTHRETGSAPYTAQENGYQPSHKRPGGTAPRRNSSVGWSDSSQVSSP
DREGTFIIDSAQGDTHSMSIAGPPPHTLMHVYPQLRVAFSAARATNLAPGTLDQPIAFDL
LHSNLGGAFDAPSGHFSCPAAGTYVFFFHILKLAISVPLYVNLMRNDEVMASAYANDGAP
DHETASNHAVLPLHVGDHIWLRLHRGAIYGSSWKYSTFSGFLLYMD
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgagagagacacgaaccatggttcagcttttcccatgtccagcctcggatgccgtggcg
ctctccgagtctatggacgagagggacgctgagctggacggcagcccggcgccgnactct
cctcgcaccctcacggctctccagctggccctgaacccatccgagacggtctaccatgga
tacgagacctacatcgaggaggggctcctttgcctccgacacaagatccgcaacattgag
aagaagaagctcaagctggaaggctatcaagcgcgattaaagaacggggacatgctaaat
ccagaccaactggaggcagttgggaggtatgaagaagtgattcacaacctgaagtttgcc
aaagagttacagatgactcttcatgctctcactcaggatctgttgaaggcccagaggaag
gccgtgcggcacgagcaggttcagagatccgagagcgaacagaggcgtttcagtacgatg
ctgcaggtccaatacgttctgcgcagtctccagaggcacgacgtcaggaaaaccttcagc
acgtgcgaacaggctcgatacctaagcatgcaggaagtggagaagctgctgaacctcgcg
acgatgctggcctgcaagagggacgagaggatgagtttggaagatcaaatggaacaggcc
tcttttgtttacatggacctactggatggcaaagacaaaccagttgctggctcgacatac
aaatccctgaaggaaaagctcctcaggctggtggactcgggtttatttgatcacctccca
gaacctgaagaaaatccaaaaaaggatgaagtacaaaaacctgactcttctacatcaaaa
ccaagctccttaaatgctgtgagtagttcgacctcggacgtgacttctcggcagttttca
aacagacgctacgtcaaggagcgtgaccccacaccacccggtcagggcgtgaacctcaac
gtggagcctcccacctggaaaggggagtttttagctctgaaagaacaggaaccacccgat
tcctgggacatggagcttacagatccgccagcgtcctccaaaatggtgttgcagaaaccg
tggaaaggagctgcaggattcatcccgaagtccatggtcaccttgaagcctgctgtcgag
actaaacagaaacgtcaaaggaaaaataaaggaagccatggccttaaatctgatgtccag
atcaagaaggccgtacctgtggaggtgtttaactctccatcctctctggctaaagatcct
gccctgcgcagacaacagctcgatcacctgatggatcagatcacgggatccttcagcttt
attcaggactctctgctggatggagaagccacgcctgggaacggccgtaccagaggtctg
cgcctgtctcccggctcctctcccctggctcagacgatcccgactgacctcctgcctcca
tcccagaattcaactcctcttcatggccacaagtgtcctggagatgcccaaagctctctg
gctaatggagatcagcccacggacacctcagatttgaagctgcacgctgaagacagcttg
catgtgactcaagataaaggcttcacgtctccacctctgtactgcagagagccctgcatc
tccgtaactcacgacactaaaaacacgagacaggcaggaaagcagccactttcgaatgga
gagattcccacacctgtcctggcccagaccttcaccactccacccaacagaagatctcta
cctccgaccagcaccgcatccttcagcagcctgcactctgtgttcagtggtgaggttcct
atgaccagaagctcggagctgaaaaccgaagaaagcggctttttagagtctgtgtgtctg
agctacagtacagcgagcaccatgagccacagcacggcgagcacacagacgccaccggag
ctcagcctgccgcaggatgacctgcagatggagagtgcatacctgtcagaaagtgatatc
agtgcttccagtcacgtttattcgtctcctggtccaaattcagcccctcactttcagtct
agtctggtccagcagtattacccacgcagtacacttcgaggtatgacacacggtgcaaga
gggctcttccactcctcacttcgctcacctggggcttccagaggtggttatgaggtgcac
agggtaaacatccgtgctccaggaggaggttttgctgcccaaacccatcgtgagactgga
tctgctccttataccgcccaagagaacgggtatcagccgagtcataaacgtcctggagga
accgcacctcggaggaacagctcagttggttggagtgactcctcccaggtgagcagccca
gaccgggagggcacgtttatcatcgactcggctcagggtgacactcactccatgtcgatc
gccggccctcctcctcacaccctgatgcacgtgtacccgcaactccgcgtggccttttca
gccgcccgtgccaccaacctggcaccaggtaccctggaccagcctattgccttcgacctg
ctccatagtaacctcggcggtgcgtttgacgccccctctggtcacttctcctgcccggct
gctggcacctacgttttctttttccacatcctcaagctggccatcagcgtcccgctgtac
gtcaatctgatgcgcaacgacgaggtgatggcttcggcatacgccaacgatggcgcaccc
gaccacgagacggccagcaaccacgccgttctgcctctgcacgtcggcgatcacatctgg
cttcgtctccaccgtggcgccatctacggaagcagctggaagtacagcaccttctcaggc
ttcctgctctacatggattga

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