Silurus meridionalis (southern catfish): 124392894
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Entry
124392894 CDS
T08004
Symbol
caprin2
Name
(RefSeq) LOW QUALITY PROTEIN: caprin-2
KO
K18744
caprin-2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124392894 (caprin2)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
124392894 (caprin2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
124392894
NCBI-ProteinID:
XP_046716109
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Position
10:complement(3386317..3397716)
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AA seq
946 aa
AA seq
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MRETRTMVQLFPCPASDAVALSESMDERDAELDGSPAPXSPRTLTALQLALNPSETVYHG
YETYIEEGLLCLRHKIRNIEKKKLKLEGYQARLKNGDMLNPDQLEAVGRYEEVIHNLKFA
KELQMTLHALTQDLLKAQRKAVRHEQVQRSESEQRRFSTMLQVQYVLRSLQRHDVRKTFS
TCEQARYLSMQEVEKLLNLATMLACKRDERMSLEDQMEQASFVYMDLLDGKDKPVAGSTY
KSLKEKLLRLVDSGLFDHLPEPEENPKKDEVQKPDSSTSKPSSLNAVSSSTSDVTSRQFS
NRRYVKERDPTPPGQGVNLNVEPPTWKGEFLALKEQEPPDSWDMELTDPPASSKMVLQKP
WKGAAGFIPKSMVTLKPAVETKQKRQRKNKGSHGLKSDVQIKKAVPVEVFNSPSSLAKDP
ALRRQQLDHLMDQITGSFSFIQDSLLDGEATPGNGRTRGLRLSPGSSPLAQTIPTDLLPP
SQNSTPLHGHKCPGDAQSSLANGDQPTDTSDLKLHAEDSLHVTQDKGFTSPPLYCREPCI
SVTHDTKNTRQAGKQPLSNGEIPTPVLAQTFTTPPNRRSLPPTSTASFSSLHSVFSGEVP
MTRSSELKTEESGFLESVCLSYSTASTMSHSTASTQTPPELSLPQDDLQMESAYLSESDI
SASSHVYSSPGPNSAPHFQSSLVQQYYPRSTLRGMTHGARGLFHSSLRSPGASRGGYEVH
RVNIRAPGGGFAAQTHRETGSAPYTAQENGYQPSHKRPGGTAPRRNSSVGWSDSSQVSSP
DREGTFIIDSAQGDTHSMSIAGPPPHTLMHVYPQLRVAFSAARATNLAPGTLDQPIAFDL
LHSNLGGAFDAPSGHFSCPAAGTYVFFFHILKLAISVPLYVNLMRNDEVMASAYANDGAP
DHETASNHAVLPLHVGDHIWLRLHRGAIYGSSWKYSTFSGFLLYMD
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgagagagacacgaaccatggttcagcttttcccatgtccagcctcggatgccgtggcg
ctctccgagtctatggacgagagggacgctgagctggacggcagcccggcgccgnactct
cctcgcaccctcacggctctccagctggccctgaacccatccgagacggtctaccatgga
tacgagacctacatcgaggaggggctcctttgcctccgacacaagatccgcaacattgag
aagaagaagctcaagctggaaggctatcaagcgcgattaaagaacggggacatgctaaat
ccagaccaactggaggcagttgggaggtatgaagaagtgattcacaacctgaagtttgcc
aaagagttacagatgactcttcatgctctcactcaggatctgttgaaggcccagaggaag
gccgtgcggcacgagcaggttcagagatccgagagcgaacagaggcgtttcagtacgatg
ctgcaggtccaatacgttctgcgcagtctccagaggcacgacgtcaggaaaaccttcagc
acgtgcgaacaggctcgatacctaagcatgcaggaagtggagaagctgctgaacctcgcg
acgatgctggcctgcaagagggacgagaggatgagtttggaagatcaaatggaacaggcc
tcttttgtttacatggacctactggatggcaaagacaaaccagttgctggctcgacatac
aaatccctgaaggaaaagctcctcaggctggtggactcgggtttatttgatcacctccca
gaacctgaagaaaatccaaaaaaggatgaagtacaaaaacctgactcttctacatcaaaa
ccaagctccttaaatgctgtgagtagttcgacctcggacgtgacttctcggcagttttca
aacagacgctacgtcaaggagcgtgaccccacaccacccggtcagggcgtgaacctcaac
gtggagcctcccacctggaaaggggagtttttagctctgaaagaacaggaaccacccgat
tcctgggacatggagcttacagatccgccagcgtcctccaaaatggtgttgcagaaaccg
tggaaaggagctgcaggattcatcccgaagtccatggtcaccttgaagcctgctgtcgag
actaaacagaaacgtcaaaggaaaaataaaggaagccatggccttaaatctgatgtccag
atcaagaaggccgtacctgtggaggtgtttaactctccatcctctctggctaaagatcct
gccctgcgcagacaacagctcgatcacctgatggatcagatcacgggatccttcagcttt
attcaggactctctgctggatggagaagccacgcctgggaacggccgtaccagaggtctg
cgcctgtctcccggctcctctcccctggctcagacgatcccgactgacctcctgcctcca
tcccagaattcaactcctcttcatggccacaagtgtcctggagatgcccaaagctctctg
gctaatggagatcagcccacggacacctcagatttgaagctgcacgctgaagacagcttg
catgtgactcaagataaaggcttcacgtctccacctctgtactgcagagagccctgcatc
tccgtaactcacgacactaaaaacacgagacaggcaggaaagcagccactttcgaatgga
gagattcccacacctgtcctggcccagaccttcaccactccacccaacagaagatctcta
cctccgaccagcaccgcatccttcagcagcctgcactctgtgttcagtggtgaggttcct
atgaccagaagctcggagctgaaaaccgaagaaagcggctttttagagtctgtgtgtctg
agctacagtacagcgagcaccatgagccacagcacggcgagcacacagacgccaccggag
ctcagcctgccgcaggatgacctgcagatggagagtgcatacctgtcagaaagtgatatc
agtgcttccagtcacgtttattcgtctcctggtccaaattcagcccctcactttcagtct
agtctggtccagcagtattacccacgcagtacacttcgaggtatgacacacggtgcaaga
gggctcttccactcctcacttcgctcacctggggcttccagaggtggttatgaggtgcac
agggtaaacatccgtgctccaggaggaggttttgctgcccaaacccatcgtgagactgga
tctgctccttataccgcccaagagaacgggtatcagccgagtcataaacgtcctggagga
accgcacctcggaggaacagctcagttggttggagtgactcctcccaggtgagcagccca
gaccgggagggcacgtttatcatcgactcggctcagggtgacactcactccatgtcgatc
gccggccctcctcctcacaccctgatgcacgtgtacccgcaactccgcgtggccttttca
gccgcccgtgccaccaacctggcaccaggtaccctggaccagcctattgccttcgacctg
ctccatagtaacctcggcggtgcgtttgacgccccctctggtcacttctcctgcccggct
gctggcacctacgttttctttttccacatcctcaagctggccatcagcgtcccgctgtac
gtcaatctgatgcgcaacgacgaggtgatggcttcggcatacgccaacgatggcgcaccc
gaccacgagacggccagcaaccacgccgttctgcctctgcacgtcggcgatcacatctgg
cttcgtctccaccgtggcgccatctacggaagcagctggaagtacagcaccttctcaggc
ttcctgctctacatggattga
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