Silurus meridionalis (southern catfish): 124392936
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Entry
124392936 CDS
T08004
Symbol
trappc9
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 9
KO
K20306
trafficking protein particle complex subunit 9
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124392936 (trappc9)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
124392936 (trappc9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
Vps23_core
Motif
Other DBs
NCBI-GeneID:
124392936
NCBI-ProteinID:
XP_046716190
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All DBs
Position
10:24069472..24256037
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AA seq
1144 aa
AA seq
DB search
MSVPDYLQCAEDHQTVLVLVQPLGAVPEDDFFCVYKRVASVSQVSVGDNQRSLSVRYRHN
YAPENGEWGEFQSHRRAVGLVAVAWCPAAGSEWALTSERFRAMKERLGPALYDSRLLAFG
MSGNATAELQRPDVAFFPGYDDCPELEKTIQDFIQSIFIVLESKRLDRATDKSGDKIPLL
CVPFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDALVHYHMSVELLRSVND
FLWLGAALEGLCSASVIIHYPGGTAGKGSARKPVVSTATDGGKRHRPGAQEVLIDPGALT
SSSSISADTSSEIGRAKNCLSPEDIIEKYKEAISYYGKYKNAGVIELEACVKAVRVLAIQ
KRAMEASEFLQNAVYINLGQLSEEEKIQRYSVLSELYELIGFHRKSAFFKRVAAMQCVAP
TIPEPGWKACYRLLLETLPGYSLSLDPKDFSKGTHRGWAAVQMRLLHELVYASRRMGNPA
LSVRHLSFLLQTMLDFLSDQEKKEVTQSLENYTSKCPGGMNVITLPDGLKLPPVALTKLP
IVRSVSLLNLPASLRPHKVKGLLGPNVSAASPFIYSPISIHTRGEERSKKIDFQWVQGDV
CEVQLMVYNPMPFELRVENMGLLTXGVDFESLPAALSLPAESGLYPVTLVGVPRTAGTIT
VVGYHTSVFGVSSDCVLDSLVSVKSSGCVVEVVPSLPRLQLTTSLPRSARVGAEDLSSSV
SLQLFNGETQKLMVTLENIGSESLNTLDLSSRTLTTKEKLFGEFVSWEMEDVCSRLPLKP
GQALTITVNIQARLDFSGQENLLQDLNDDGISVTGLPISSPLRQVLKPRPENKQVNSDAN
KSEYNNVKTLECVLCFRYSGGPGHVDGYYRELSLGIRVDVEPSVFFTRVSTLPATSTRQC
HLLLDVFNPTEHELTLTARNQELVLHSTECQRMAIQVDKIDFESLPVPSHDAVQQSSVYE
REEEKQQVQGGHINSTLQLCWNIPSLKRQGEASVEGVLNQLVLEHLQLAPLQWDIAVNGK
ACDCDAVAECTVGDAVPLEVKLTNRSKGAVGPFSLTVVPFQDYQNGVQNYELQEAVTFIG
SNSFYIDSVSPAGNSTCAGALLFLYTGDFYLNIKFQDDGTSRELPPTWFCLPSVHVRAQE
PIAA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgccggattacctccagtgtgctgaagatcaccagacggtgctggtgctggtg
cagccactgggcgccgtgcccgaggatgacttcttctgcgtgtacaagcgtgtggcgagc
gtgtcccaggtgagtgtgggagacaaccagcgatctctgtccgtacgctaccgacacaac
tacgcccccgagaacggagaatggggcgagttccagtcccaccgcagggccgtagggctg
gtagccgtagcctggtgtccggcagcgggcagcgaatgggcgctcacctccgagaggttc
cgcgccatgaaggagcgactcggtccggcgctgtacgactcgcgcctgctggcgttcggg
atgagcggaaacgccactgcagagctccagagaccagacgtggccttcttccccgggtat
gacgactgccccgaactcgagaagaccatccaggacttcattcaatccatcttcatcgtc
ctcgagtccaaaaggctggaccgagccacggataaatccggggataaaatcccgctcctg
tgtgtcccgttcgagaagaaggacttcgtcggattggacacggacagcaggcactataag
aagcgctgtcagggccgcatgaggaagcatgtgggagatctgtgtctgcaggctggaatg
ttacaggacgctctggtgcactaccacatgtccgtcgagctgctgcgctccgtcaatgac
ttcctctggctgggagctgctctggagggtctctgctcagcctctgtaataatccattac
ccaggaggcacggcaggaaagggcagcgcacgcaaacccgtcgtctccacggcaacggac
ggcgggaagagacatcgtccaggagctcaggaggttctcattgacccaggtgctttgacc
tccagcagcagcatcagcgccgacacgagcagcgagatcggacgagccaagaactgtctg
agtccagaggacatcatcgagaagtacaaagaggccatttcttattacggcaagtataag
aacgctggagtgattgagttggaggcatgtgtgaaggcagtgcgagtgttagccattcag
aagagagccatggaggcgtccgagttcctgcagaacgcggtctacatcaacctgggccag
ctctctgaggaggagaagatccagcgttacagtgtcctgtctgagctgtacgaactcatc
gggtttcaccgcaagtctgcgttctttaaacgagtagctgccatgcagtgtgtggctcct
accatccccgagcctggctggaaggcatgttacagattactgctggagactctgcccgga
tacagcctctctctcgaccctaaagatttcagcaaaggaacccatcgcggctgggccgcc
gtacagatgcgtttgctgcatgaattagtgtacgcatcccggcgtatggggaaccctgcc
ctcagcgtccgccacctctccttccttctacagactatgctggactttctgtcagatcaa
gaaaagaaggaggtgactcagagtctggagaactacacctccaagtgtcccggagggatg
aacgtcatcacgcttccagacggactcaaactgcccccggtggccttaaccaagctgcct
attgtcaggtctgtgtctctgctgaacctgcctgccagccttcgcccacataaggtgaag
ggtctgctcgggccgaacgtcagcgccgccagcccattcatctactcccctatcagcatc
cacaccagaggagaagaacgctccaagaagatcgatttccagtgggtgcagggggatgtg
tgtgaggtgcagctgatggtctacaaccccatgccctttgaactacgtgtggagaacatg
ggtctgttgaccntcggtgtggattttgagtccctgcccgctgctctgtctctcccggca
gagtccggtctctaccccgtcacactggtgggggtccctcgcactgccggcacaatcaca
gttgtcggttaccacacgtcagtctttggtgtgagcagtgactgtgtgttggacagtctg
gttagtgtgaagtccagcggatgtgtggtggaggtggtgccgtctctgccccgcctccaa
ctcaccacctcactaccacggtctgctcgtgtaggtgctgaggatctgtccagcagcgtg
tctctacagctgtttaatggagaaactcagaagctcatggtcacactggagaacatcggc
tctgagagtttaaacacactggatctgtcctctaggacactcactactaaagaaaagtta
tttggagagtttgtgagctgggaaatggaagatgtttgttctcgtctccctttgaaacca
ggccaggctctcaccatcacagtcaacatccaggccaggctggacttctcaggtcaggag
aacctgctccaggacctcaacgatgatggtatcagtgtgaccggactgcccatttccagc
cccctgagacaggtcctgaagccccgcccagaaaacaagcaagtcaactccgacgccaac
aagagcgaatacaacaatgtaaagactctggagtgtgtgttgtgtttccggtacagtgga
ggtcccgggcatgtggatggttactacagagagctcagtctaggcattagagtggacgtg
gagccctcagtgttcttcaccagggtcagcactctcccggctaccagtactcgtcagtgc
cacttgctgctggatgtgtttaaccctactgagcatgaactcacactcaccgccaggaac
caagagctggtgctacactcaaccgagtgtcagaggatggccatacaggtggataagatt
gactttgagagcttgccggttccgtcccatgatgctgtgcagcagagcagtgtgtacgag
agggaggaggagaagcagcaggttcagggaggacacatcaacagcactctacagctctgc
tggaacatcccgtctctgaagaggcagggtgaggcgagtgttgaaggcgttctcaaccag
ctcgtcctggagcacctgcagctcgcaccgctacagtgggacatagcggtgaacggaaaa
gcgtgcgactgtgacgcggtcgccgagtgtactgtgggcgacgccgtgccgctggaagtc
aagctgaccaatcgcagtaagggtgcggtggggccgttctccctcacggtggtgccgttc
caggactatcaaaatggcgtgcagaactacgagctgcaggaagctgtcacgttcatcgga
tccaactccttctacatcgattcggtgagtccagcaggaaactcgacctgtgctggtgcg
ttgctgttcctttacaccggcgatttctacctgaacatcaagttccaggacgacggcacg
agccgagagcttcctcccacatggttctgcttacccagcgtccacgtccgagcgcaagaa
ccaattgctgcatga
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