KEGG   Silurus meridionalis (southern catfish): 124392944
Entry
124392944         CDS       T08004                                 
Name
(RefSeq) ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04137  Mitophagy - animal
smeo04140  Autophagy - animal
smeo04144  Endocytosis
smeo04145  Phagosome
smeo04148  Efferocytosis
smeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124392944
   04145 Phagosome
    124392944
   04140 Autophagy - animal
    124392944
   04137 Mitophagy - animal
    124392944
   04148 Efferocytosis
    124392944
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124392944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124392944
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smeo04147]
    124392944
   04031 GTP-binding proteins [BR:smeo04031]
    124392944
Membrane trafficking [BR:smeo04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    124392944
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124392944
  Exosomal proteins of other body fluids (saliva and urine)
   124392944
  Exosomal proteins of colorectal cancer cells
   124392944
  Exosomal proteins of bladder cancer cells
   124392944
GTP-binding proteins [BR:smeo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    124392944
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU RsgA_GTPase ATP_bind_1 cobW nSTAND3 Septin PduV-EutP AAA_16 AAA_7 AAA_22 AAA_24 NTPase_1 G-alpha FLYWCH_N SRPRB AAA_5 ATPase_2 AAA_14 NB-ARC NACHT ABC_tran DUF1441 ATP-synt_ab
Other DBs
NCBI-GeneID: 124392944
NCBI-ProteinID: XP_046716606
LinkDB
Position
1:20442153..20445197
AA seq 207 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMIEDRLVTLQ
IWDTAGQERFQSLGVAFYRGADCCVMVFDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
LVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPDQIKLERNDGSNSSGSQCSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atggcatccagaaagaaggttcttctaaaagtcatcatacttggggactcaggtgttgga
aagacatctttaatgaaccagtatgttaacaagaaattcagcaatcagtacaaagctaca
ataggagctgactttcttacaaaggaggtgatgattgaggaccgacttgttactttgcag
atttgggacacagctggacaggaaaggtttcagtctctgggggtggcattttatcggggt
gcagactgttgtgtgatggtatttgatgttactgctccaaacacatttaagaccctggac
tcctggagagatgagtttttgattcaggccagtcctcgtgacccagacaactttcctttt
ctggtcttaggcaacaagatcgacctggaaaacagacaggtgacaacaaagcgagcacag
gcatggtgtcagagtaaaaacaacattccttacttcgagaccagtgcaaaagaggctatc
aatgttgaacaagcctttcaaaccattgcacgaaatgctcttaaacaggaaacagaggta
gaactctataatgaatttccagatcagattaagttggagaggaatgacggctccaactcc
tcgggatcacagtgcagctgctag

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