Silurus meridionalis (southern catfish): 124392950
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Entry
124392950 CDS
T08004
Symbol
rab3il1
Name
(RefSeq) guanine nucleotide exchange factor for Rab-3A isoform X1
KO
K16779
Rab-3A-interacting protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124392950 (rab3il1)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124392950 (rab3il1)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124392950 (rab3il1)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
124392950 (rab3il1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec2p
SLFN-g3_helicase
XhlA
TcaA_2nd
fvmX5
Motif
Other DBs
NCBI-GeneID:
124392950
NCBI-ProteinID:
XP_046716208
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Position
10:5452229..5467675
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AA seq
435 aa
AA seq
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MDSFEGIHAVCISSSPPAGSTPSPGYELLVTGSKGIALYSSHVFFGKEDSSEVGRNNHSR
VKECPVGKLIDLEADLDLGTESGRGSRGETMLQEDTETERERRVSRLRSSSIEIREKGTE
FLREQLDAAQKELKLKGEECERLSHLRNQLEQELEELTASLFEEAHKMVREANVKQATAE
KQLKEAQGKIDVLQAEVTALKTLVLTSTPSSPNPQLHPQLLSPGSRRAGRTGGHTRNKSA
TLTLSQLQSEPPSENAHTSRQEKELDSVLFAEFLSWREKPSLDRSSAFLTRIYNEEIGPC
LSFTCSELSRSVQSAVENNILTIEPVALTTSQMDKTSAVDCGGPNGCRAPVETKCALSGM
SHLCRHRIKLGDKENYYYISPSSRARITAVCNFFTYIRYIQQGLVRHDAEQMFCEVMRLR
REMSVAKLGFFYEEN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtttgagggaatccacgcagtatgtatctcgtcttctcctccagcaggatcc
acacccagccctggatatgagctcctggttacaggcagcaaaggaatagcactgtactcc
tcccatgtatttttcgggaaagaggattcttcagaggtcgggagaaacaaccacagccga
gttaaggaatgtcctgttggaaagttgattgacctagaggcagatctggatctcggcaca
gagtctggacgaggaagtcgaggagaaacaatgctccaggaggatacagagactgagagg
gagagacgagtgtctcgactccgaagctcttccatagagatcagagaaaaaggcacagag
ttcctcagagagcagctggatgctgcacagaaggagttgaagctaaagggggaagaatgt
gagcgcctgtctcatttgagaaaccagctggagcaggaactagaagagttgactgcaagt
ctgtttgaggaagctcacaagatggtgagggaggccaatgttaaacaggccactgccgag
aagcagctaaaagaggcacagggcaagattgatgtgcttcaggcagaagtgactgcatta
aagaccctcgtgctgacctccaccccctcctcccctaatccccagctccacccccagtta
ctctccccagggtccagaagagctgggaggacgggaggacacacgcgcaacaagagcgcc
accctcactctgtctcagctacaatcagagccacccagcgaaaacgcacacacgagccgg
caagaaaaagagctggactctgtgttgtttgctgagtttttgtcctggagagagaaaccc
agtctggatcggtcatctgccttcctgacccggatctacaacgaggaaatcggaccctgt
ctttctttcacctgctcagaactgtctcggtcagttcagagcgctgtggagaataacatt
ctgactatcgagcctgtcgccttgaccacatcgcagatggacaagacctccgctgttgac
tgcggaggacccaatggctgccgagcaccagtagagacgaagtgtgctctgagtggaatg
tctcatctctgccgacatcgcatcaaactgggagataaagagaattattactacatctcg
ccttccagcagagcgaggatcacagcagtgtgtaacttctttacttacatcagatacatc
cagcagggtctggtcagacatgatgccgagcagatgttctgcgaggtgatgcgcttgaga
cgggagatgtccgtcgccaagttagggttcttctatgaagagaactga
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