KEGG   Silurus meridionalis (southern catfish): 124392968
Entry
124392968         CDS       T08004                                 
Symbol
dus3l
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smeo03016]
    124392968 (dus3l)
Enzymes [BR:smeo01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     124392968 (dus3l)
Transfer RNA biogenesis [BR:smeo03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    124392968 (dus3l)
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 FMN_dh
Other DBs
NCBI-GeneID: 124392968
NCBI-ProteinID: XP_046716244
LinkDB
Position
10:complement(26992284..27009534)
AA seq 639 aa
MEDGEVNGAESSTVQTRDRGEAALKLQYVTNKEKFYEFLAAGSKSKEAQDETASDVAPAE
PEPKRRRVEECDGETVKEEEEKKKKRRGQNKSRPHIKPHSYEDRRLCPSVIQGSGRKCFY
GEKCKFLHDVADYMSTKPKDLGDTCYLYSTFGRCHYGVTCRFAKAHTGPDNENLVNEELR
KSLEKTETVRNGLDKELQKQLRKRQVSFKNSEKFLKSIGAGKKTDRKSSGSENTQKEAEQ
EEEVSQHESKQEDPTAESNTEESQTKPPVKTIGPLMDDDIIKLRPCEKKQVDFRDKLYLA
PLTTCGNLPFRRVCKRLGADITCGEMAMCTNLLQGQSSEWALLKRHHTEDVFGVQLEGCF
PDSMTRCAELLNHNIDVDFVDINSGCPIDLVYKKGGGCGLMSRTNKFEQIVRGMTSVLDV
PLTVKIRTGVQHNCNIAHKLIPELKKWGVSMITLHGRSREQRYTKMADWSYIDTCSKVAA
PVPLFGNGDVLTYEDALRARETGVSGIMVARGALIKPWLFTEIKEQRHWDISSSERLQIL
QDFTHFGLEHWGSDTQGVEKTRNFLLEWLSFTCRYIPVGLLERVQKINERPPFYLGRDYL
ETLMASQHVDDWVRISEMLLGSVPKNFSFLPKHKANAYK
NT seq 1920 nt   +upstreamnt  +downstreamnt
atggaggacggtgaggtgaacggtgcagagagcagcacagtgcagaccagagacagagga
gaagcagccctgaagctacagtacgtcaccaacaaggagaagttctacgagtttctggct
gccggatcaaagagcaaggaagcccaggatgaaactgcgtcagacgtagctcctgcagaa
ccggagccaaagagacggagagtagaggagtgtgatggagagacggtgaaggaggaggag
gagaagaagaaaaaacggaggggccagaataagtcaagacctcacattaaacctcacagc
tatgaagatcgcagactctgtccttcagttatacaggggtctggcaggaagtgtttctat
ggtgagaagtgtaagttcctccatgacgtggctgattacatgtccaccaaaccaaaagat
ctgggagatacctgttacctttactccacctttggcagatgtcattatggagtcacctgc
aggtttgctaaagctcacactggccctgataacgagaacctggtgaacgaggagctgcgt
aaaagcctggagaaaacagaaactgtgaggaacggtctggataaagagctccaaaaacaa
ctccggaagagacaagtgtccttcaaaaactctgagaagttcctcaagagcatcggcgca
gggaaaaaaacagacaggaagtcgtccgggtcagaaaacacacagaaggaggcggaacag
gaagaggaagtgagtcagcatgagagcaaacaagaagatccaacagctgagagcaacact
gaggagagtcagacgaagcctcctgtgaagaccatcgggccgttgatggatgatgacatc
atcaaacttcgcccgtgtgagaagaagcaggtggatttcagagacaagctctacctggct
ccattaacaacgtgtggaaatttgccgttccggcgtgtgtgtaagcgtcttggagcagat
ataacgtgtggagagatggccatgtgcacaaacctgctacagggtcagtcgtctgagtgg
gctctgctcaagagacaccacactgaggatgtgtttggtgtgcagctggaaggatgtttc
ccagactccatgacacgctgtgctgaactcctcaaccacaacatcgatgttgactttgtg
gacatcaactctggttgtcctatagaccttgtgtacaagaagggtggtggatgcggcctt
atgagcagaaccaacaaattcgagcagatcgtgcgggggatgacctctgttctggatgtg
cctttaaccgtgaagatccgtacaggggtgcagcacaactgcaacatcgcacacaaactc
atccctgagctgaagaagtggggcgtgtctatgatcacattacacggtcgatccagagag
cagcgatacaccaaaatggccgactggagttacatagacacctgctctaaagtcgctgct
cctgtcccactgttcggtaacggtgatgttctgacctatgaagatgctctgagggccaga
gagacaggagtgtctggaatcatggtagcgagaggtgccctcattaaaccgtggctcttc
accgagattaaggagcagagacactgggacatctcgtcttcagaacgtctccagatcctg
caggattttactcacttcggattggagcactggggctcagacacgcagggggtggagaaa
acacgcaacttcctgctcgagtggctctccttcacctgcagatacatccccgtgggtctg
ctggagcgcgtgcagaagatcaacgaacgtcctccattttatctgggacgggattatctg
gagaccctgatggccagtcagcacgtggacgactgggtcaggatcagtgagatgttgctg
ggttccgtcccgaagaacttcagcttcctgcccaaacacaaagctaacgcctataagtga

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