Silurus meridionalis (southern catfish): 124393043
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Entry
124393043 CDS
T08004
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03030
DNA replication
smeo03410
Base excision repair
smeo03420
Nucleotide excision repair
smeo03430
Mismatch repair
smeo04110
Cell cycle
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124393043 (pcna)
03410 Base excision repair
124393043 (pcna)
03420 Nucleotide excision repair
124393043 (pcna)
03430 Mismatch repair
124393043 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124393043 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
124393043 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smeo03032
]
124393043 (pcna)
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124393043 (pcna)
DNA replication proteins [BR:
smeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
124393043 (pcna)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
124393043 (pcna)
MMR (mismatch excision repair)
Other MMR factors
124393043 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
124393043 (pcna)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Motif
Other DBs
NCBI-GeneID:
124393043
NCBI-ProteinID:
XP_046716305
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All DBs
Position
11:4925433..4928150
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AA seq
260 aa
AA seq
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MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRSDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADSLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNI
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHIKYYLAPKIDEESS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggcccgactggttcaaggctccatcctgaagaaggtgctggaggccctaaag
gatctgatcaccgaggcgtgctgggatgtgagctcgtcggggatctctctgcagagcatg
gactcgtctcatgtgtccctggtgcagctcacactgcgcagcgacggcttcgactcgtac
cgctgcgacaggaatctcgccatgggtgtcaacctgagcagcatgtctaaaatcctgaag
tgtgccgggaatgaggacatcattaccctgagagcggaagacaatgcagattctctggct
ttggttttcgagactctcaatcaggagaaagtctctgattatgagatgaagctaatggac
ttggatgtggagcagcttggaattccagagcaggagtatagctgtgtagtgaagatgccc
agtggtgaatttgctcggatttgccgggatttgtcccagattggagatgctgtgatgatc
tcctgtgccaaagacggtgtgaagttctctgccagtggtgaactgggaactggaaacatc
aaactgtctcaaacaagcaatgtggacaaagaagatgaggctgtgactattgaaatgaac
gaacctgtgcagctcatctttgcactgaactacctgaacttcttcaccaaggccactcct
ctctccaagacggtcacactcagcatgtctgcagatatcccacttgtggtggagtacaag
attgcagatatgggtcacatcaagtactacctagctcctaaaattgacgaggagtcatcc
tga
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