Silurus meridionalis (southern catfish): 124393049
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Entry
124393049 CDS
T08004
Symbol
vsig8a
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8a
KO
K06788
coxsackievirus and adenovirus receptor
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03267
Virion - Adenovirus
smeo04514
Cell adhesion molecule (CAM) interaction
smeo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
124393049 (vsig8a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124393049 (vsig8a)
04517 IgSF CAM signaling
124393049 (vsig8a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124393049 (vsig8a)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
CTX family
124393049 (vsig8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
Ig_3
I-set
Ig_2
Ig_C17orf99
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
Protocadherin
EphA2_TM
Ig_PDGFR_d4
DUF4719
Ig_TRAPPC11_1st
DUF5385
Sema4F_C
F59B103_C
Syndecan
DUF3377
Baculo_11_kDa
DUF4381
Amnionless
SMIM28
DUF2500
Vpu
Motif
Other DBs
NCBI-GeneID:
124393049
NCBI-ProteinID:
XP_046716314
LinkDB
All DBs
Position
11:complement(1365000..1379165)
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AA seq
365 aa
AA seq
DB search
MNVFVRTGSSQQDIHRNLKMRCVPASPSVLVLLCAGSVLFIADVTLPMKITSSGPQTLQL
AQGEQKTLGCTYTPGPEDVGELDIEWTLVSPDTTQKDKVLLSYSGGQKYVHGDPELMTGV
DFAVSDPSLGDASLSIAELTASHTGTYQCKVKKAPGLDMLKVTLQILERPSVPKCWMEGD
GGVGTSLMLRCRSDEGSTPLQYLWKRETGGPIPPTVTQDPFLGELLISNHSTDLMGIYAC
EASNAVGKEFCRINLQAFSPPNRAGVIVGIVCGCLLLIIIIIIILLLLFFRCRQQRRRYE
KEFSNEIREDVPAPESRPTSRVSSRHSRQAYNQINQTDHLHHTETSSMGYDGTLPRYDDK
YGYIV
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtttgtgaggaccggatcatcacagcaagatattcacagaaatctgaagatg
aggtgtgttccagcctcgccgtctgttctcgtcctactgtgtgcaggaagtgtacttttc
atcgcagacgtgaccctgccgatgaagatcacctcctccgggcctcaaactttacagctg
gcacaaggagagcagaaaaccctggggtgtacgtacacacccgggcctgaggatgtcggt
gaactggacatcgagtggacactggtcagtccagacaccacgcagaaggacaaagtgctc
ctgtcgtattcaggtggacagaaatatgtccatggtgacccagagttaatgacgggggtg
gactttgccgtgagtgacccctctctgggcgacgcctcgctctcgatcgccgagctcacg
gcctcacacaccggaacgtaccagtgtaaagtgaagaaagctccgggactggacatgctc
aaggtcactctgcagattctggagcgaccatcagttccgaagtgttggatggaaggagac
gggggcgtggggacgtctctgatgcttcgctgcagatcggatgaaggttctacacccctc
cagtacctgtggaagagagaaaccggaggtccgattcctcccaccgttacacaggatccg
ttcctcggagaacttcttatctctaatcactccacggacttgatgggaatctacgcatgt
gaggcgtctaacgctgtggggaaagagttttgtcgaatcaacctgcaggccttcagtcct
cctaacagagccggtgtgatcgtgggcatcgtgtgcggatgtctgttgctcatcattatt
atcatcatcatcctgttgctcctgttcttccgatgcagacagcagcggcggcgatacgag
aaagagttctccaatgagatcagggaggacgttccagcacccgaaagccgacctacaagt
cgtgtttcgagtcgtcactccagacaggcgtacaaccagataaaccaaacagaccacctc
catcacacggagacaagcagcatgggatacgacggcacgctgcccagatacgacgacaaa
tacggctacatcgtctga
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