Silurus meridionalis (southern catfish): 124393049
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Entry
124393049 CDS
T08004
Symbol
vsig8a
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8a
KO
K06788
coxsackievirus and adenovirus receptor
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03267
Virion - Adenovirus
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
124393049 (vsig8a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124393049 (vsig8a)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
CTX family
124393049 (vsig8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
I-set
Ig_2
Ig_C17orf99
Sema4F_C
EphA2_TM
Protocadherin
Shisa
DUF4719
DUF5385
DUF4381
Syndecan
Baculo_11_kDa
DUF4446
Ly49
Amnionless
YajC
DUF3377
Vpu
Motif
Other DBs
NCBI-GeneID:
124393049
NCBI-ProteinID:
XP_046716314
LinkDB
All DBs
Position
11:complement(1365000..1379165)
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AA seq
365 aa
AA seq
DB search
MNVFVRTGSSQQDIHRNLKMRCVPASPSVLVLLCAGSVLFIADVTLPMKITSSGPQTLQL
AQGEQKTLGCTYTPGPEDVGELDIEWTLVSPDTTQKDKVLLSYSGGQKYVHGDPELMTGV
DFAVSDPSLGDASLSIAELTASHTGTYQCKVKKAPGLDMLKVTLQILERPSVPKCWMEGD
GGVGTSLMLRCRSDEGSTPLQYLWKRETGGPIPPTVTQDPFLGELLISNHSTDLMGIYAC
EASNAVGKEFCRINLQAFSPPNRAGVIVGIVCGCLLLIIIIIIILLLLFFRCRQQRRRYE
KEFSNEIREDVPAPESRPTSRVSSRHSRQAYNQINQTDHLHHTETSSMGYDGTLPRYDDK
YGYIV
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtttgtgaggaccggatcatcacagcaagatattcacagaaatctgaagatg
aggtgtgttccagcctcgccgtctgttctcgtcctactgtgtgcaggaagtgtacttttc
atcgcagacgtgaccctgccgatgaagatcacctcctccgggcctcaaactttacagctg
gcacaaggagagcagaaaaccctggggtgtacgtacacacccgggcctgaggatgtcggt
gaactggacatcgagtggacactggtcagtccagacaccacgcagaaggacaaagtgctc
ctgtcgtattcaggtggacagaaatatgtccatggtgacccagagttaatgacgggggtg
gactttgccgtgagtgacccctctctgggcgacgcctcgctctcgatcgccgagctcacg
gcctcacacaccggaacgtaccagtgtaaagtgaagaaagctccgggactggacatgctc
aaggtcactctgcagattctggagcgaccatcagttccgaagtgttggatggaaggagac
gggggcgtggggacgtctctgatgcttcgctgcagatcggatgaaggttctacacccctc
cagtacctgtggaagagagaaaccggaggtccgattcctcccaccgttacacaggatccg
ttcctcggagaacttcttatctctaatcactccacggacttgatgggaatctacgcatgt
gaggcgtctaacgctgtggggaaagagttttgtcgaatcaacctgcaggccttcagtcct
cctaacagagccggtgtgatcgtgggcatcgtgtgcggatgtctgttgctcatcattatt
atcatcatcatcctgttgctcctgttcttccgatgcagacagcagcggcggcgatacgag
aaagagttctccaatgagatcagggaggacgttccagcacccgaaagccgacctacaagt
cgtgtttcgagtcgtcactccagacaggcgtacaaccagataaaccaaacagaccacctc
catcacacggagacaagcagcatgggatacgacggcacgctgcccagatacgacgacaaa
tacggctacatcgtctga
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