Silurus meridionalis (southern catfish): 124393141
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Entry
124393141 CDS
T08004
Symbol
atg10
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10 isoform X1
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04136
Autophagy - other
smeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124393141 (atg10)
04136 Autophagy - other
124393141 (atg10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124393141 (atg10)
04121 Ubiquitin system [BR:
smeo04121
]
124393141 (atg10)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124393141 (atg10)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
124393141 (atg10)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
124393141 (atg10)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124393141 (atg10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
124393141
NCBI-ProteinID:
XP_046716528
LinkDB
All DBs
Position
11:12259364..12277654
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AA seq
255 aa
AA seq
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MGYRHFRSCAQTCKILAENTCTLTEFSIASKSFFFQMSSGEVSNISSYCLDEKSFHLCCK
LFLQHSGVIRDGWSWADVKGSEEGYVKKTAIIPAKLGSLLNHKADDGMNAVTGVDECDDE
AVGDYIVQSQVLVHYEYHILYSIGHQVPILYFRASTLDGQPLSLDEVWSNIHPNYRQRLL
QGPWDTLTQQEHPFLGQPFFMLHPCHTEEFMKPLLQMADDKKRKINYITTWLSVVGPVVG
LDVPLSYHTELPAPD
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgggctataggcacttccgttcatgcgcacaaacctgcaaaatattggcagaaaacact
tgtacattgaccgaattctccattgcaagcaaatcatttttctttcagatgtcaagtgga
gaagtgtcaaacatttctagctactgcttagatgagaagagtttccatctttgctgcaag
cttttcctacagcactcgggtgtaattagagatggatggagttgggcagatgtgaagggt
agtgaagaaggttacgtgaaaaagactgctataatacctgcaaaattaggttctttgctt
aatcacaaagctgatgatgggatgaatgctgtgacgggagtagatgagtgtgatgatgag
gcagttggggattatatagtacaaagtcaagttttagtgcactatgaataccatatttta
tactccattggtcatcaggtgcctattctctacttcagagcatctacattagatggacag
cccttgtcccttgatgaagtttggagcaatattcacccaaactacagacaaaggctactt
caaggaccttgggatacactgactcaacaggaacacccttttctaggtcagcctttcttt
atgctccatccttgtcacactgaagagtttatgaaaccacttttacaaatggcagatgac
aaaaaaagaaaaataaactacatcacaacatggctgagcgtggtagggcctgtggtggga
ttggacgtgcctcttagttatcacacagaattgcctgctcctgactga
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integrated database retrieval system
