Silurus meridionalis (southern catfish): 124393198
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Entry
124393198 CDS
T08004
Symbol
syk
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosine-protein kinase SYK
KO
K05855
spleen tyrosine kinase [EC:
2.7.10.2
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04625
C-type lectin receptor signaling pathway
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
124393198 (syk)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124393198 (syk)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124393198 (syk)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
124393198 (syk)
Protein kinases [BR:
smeo01001
]
Non-receptor tyrosine kinases
SYK family
124393198 (syk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
SH2
DUF7063
DUF7145
ABC1
Kdo
SH2_1
Haspin_kinase
RIO1
Motif
Other DBs
NCBI-GeneID:
124393198
NCBI-ProteinID:
XP_046716706
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All DBs
Position
11:20643938..20662293
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AA seq
625 aa
AA seq
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MADQVQLLPFFYGNITREEAEDYLRQSGMGNGLYLLRQSRNYLGGFALSVAYNHQCYHYT
IEREMNDTYAIAGGKSYRSPVDVVDYHAQESDGLVCLLKKPCNRPRGVEPKVGAFEDLKE
QLIRQYVQHTWKLKGASLEQAIISQRPQLEKLIATTAHEKMPWFHGTITREDSEPRLLNS
PRTNGKFLIRQRDNNGSFALCLLHHGQVMHYRIDRDKAGKLXIPDGKKFDTLWQLVEHYS
YKPDGLLRVLTEPCARPEGPPAIPGNHPELGTGGILSRIRSASFPKPGLKKTAFKKCKEK
ILDVCPGKITTYLRRPQESDNTYAKSTLLATEELPMSTKVYESPYADPDELRSTTVDRKN
LFLEDGELGSGNFGTVLRGTYQMRKTQKPVAIKILKNGENNDAVRDEMLREAEVMQQLDN
PYIVRMIGICEAENLMLVMELAELGPLNKYLQKNRLLTKNVTELVHQVSMGMKYLEEHNF
VHRDLAARNVLLVTQHYAKISDFGLSKALTSEQDFYESKGHGKWPVKWYAPECLHYFKFS
SKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVMQMIESGERMAAPANCPPEIYNLMKKCWT
FKPEERPGFAVVEPRLRDYYYDISQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaagtgcaacttttgccctttttctatggcaacatcactcgagaggaagct
gaggactatctgagacaatcaggcatgggcaatggcctctacctgcttcgccaaagccgc
aactatttgggtggctttgctctgtctgtggcctacaaccatcagtgctaccactacacc
atcgagagggagatgaatgatacatatgctatagcaggaggaaagtcctaccgcagtcca
gttgatgtggtggactaccatgcgcaagagtctgatggcctggtgtgtttgctgaaaaag
ccttgcaatcgaccccggggcgttgaacccaaggtgggggctttcgaggatctaaaggag
cagctgatcaggcaatatgtacagcacacatggaagctgaagggtgcctcattggagcag
gctatcatcagtcaaagacctcagctggagaagctgattgccaccacagcacatgagaag
atgccctggtttcatgggaccatcacacgagaagactctgagccccgtttactcaacagc
cctcgaaccaacggcaaatttctaatccggcagcgagataacaacggctcctttgcactt
tgtctcctccaccatggccaagtcatgcactatcgcattgacagggacaaagctggaaaa
ctcnncatcccagatggcaaaaagtttgacacactttggcagctggtagagcattattcc
tataaacctgatggcctgctccgagtgctgactgaaccctgcgcacgacccgaaggccca
ccagctattcctggaaatcatccagagcttggcacaggtggaattctctccagaatccga
tccgcttccttccccaaacctggtctcaaaaagacagcgtttaagaagtgtaaagaaaag
atcttagatgtttgccctggtaagatcaccacataccttcgcagacctcaagaatccgat
aatacttacgcgaaatcgacactgcttgcaacagaggaattacccatgagcactaaggtg
tacgagagtccatatgctgaccctgatgaactacgctcaaccacagtggaccggaaaaac
ttgtttttggaagatggagagctcggctcaggcaatttcggcacagtgcttaggggcacg
taccagatgcggaaaacacagaaaccggtagcaataaagatcctgaagaacggagaaaac
aacgatgcagtaagagatgaaatgcttcgtgaggctgaagtcatgcagcagctggacaac
ccctacattgtgcgcatgatcggcatctgtgaagccgagaacctcatgttggtcatggag
ctggctgagctcggccctctgaacaagtatctgcaaaaaaacagactcctcactaaaaac
gtcaccgagctcgtgcatcaggtctcgatgggcatgaagtacctggaggagcataacttc
gttcacagagacctcgcagctcgcaatgtgctgttagtcactcagcactatgcaaaaatc
agcgacttcgggttgtccaaagccctcaccagtgagcaggacttttacgagtctaaaggt
catggaaaatggcccgtgaaatggtatgcccctgaatgcttgcactacttcaagttctcc
agtaagagtgatgtgtggagctttggcgtgctgatgtgggaggctttttcatatggacag
aagccatacaagggaatgaaaggaaatgaggtaatgcagatgattgagagtggtgagagg
atggcagctccggcaaactgcccacctgagatatacaacctcatgaagaagtgttggaca
ttcaagccagaggagagaccaggctttgctgtggtagagcccaggctgagagactactac
tatgacatttctcagtga
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